prot_H-paniculata_contig3206.8632.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3206.8632.1
Unique Nameprot_H-paniculata_contig3206.8632.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length309
Homology
BLAST of mRNA_H-paniculata_contig3206.8632.1 vs. uniprot
Match: D7FKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS0_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 5.180e-61
Identity = 119/259 (45.95%), Postives = 157/259 (60.62%), Query Frame = 0
Query:   49 KVVLAPGSQYDVDNGRSACSCICLEAAISILGQLRGKREWTGSPDDVQGEDGERLYVVAVYIARSIAPPRRWIALFHFLEDVDDARTHRRVFEAVA-TSYLQIPGAAPSWLRKKCGGYRDALGLASSRGCHQSLLSSETSFSRIMEDIRNERQRKSCPIAVTITKPPETVVAFLPPENGSDTSSAGTEAPSAPQQWLLFDSHPRPQLGLTGASVQSFEAESALVTALNLIFPVVDVESNSLLASMYNMLDCTPLFLKQR 306
            +VV A  SQYDV NGRS+C+CICLEA++++L +L     W GSPDDV                                   +   T   ++EAVA T  L +   + + +      Y DAL  A+ +  HQ LL S+TS +R++ +IR ER+ +S P+AV ITKPPETVV FLP E+ ++  +A T APS  +QWLLFDSHPRPQ GL GASV+ F AE ALV ALN IFP VD+ ++S+++SMYNM DC PL LK+R
Sbjct:   14 QVVSASISQYDVQNGRSSCTCICLEASLTVLERLGDGTAWAGSPDDV----------------------------------ANCVNTGVAMYEAVAATGTLAVEHTSVAEILATVARYHDALQPATDKVTHQGLLGSDTSIARVLGEIRGERRDQSRPVAVVITKPPETVVCFLPAESQAEGGAATTGAPST-RQWLLFDSHPRPQHGLVGASVRCFAAEEALVEALNDIFPAVDLGTDSVMSSMYNMFDCVPLSLKKR 237          
BLAST of mRNA_H-paniculata_contig3206.8632.1 vs. uniprot
Match: A0A448Z9M5_9STRA (UBA domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9M5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.420e-12
Identity = 92/345 (26.67%), Postives = 144/345 (41.74%), Query Frame = 0
Query:    6 QLLAMGFPEDAAKSCLQAHGGNVEEAINTLLS-----------------TPWPE----QEQASSKVVLAPGSQYDVD-NGRSACSCICLEAAISILGQLRGKREWTGSPDDVQGEDGERLYVVAVYIARSIAPPRRWIALFHFLEDVDDAR--THRRVFEAVATSYL--QIPGAAPSWLRKKCGGYRDALGLASSRGCHQSLLSSETS--------FSRIMEDIRNERQRK---------------SCPIAVTITKPPETVVAFLPPENGSDTSSAGTEAPSAPQQWLLFDSHPRPQLGLTG--ASVQSFEAESALVTALNLIFPVVDVESN--SLLASMYNMLD 297
            QL+ MGFPE+ A++ LQ   GN+E A+N LLS                 T  P      E  ++ V+    SQY    +GRSAC+CI L AA  +      K            +  E+  +   ++ R+I      ++ +  L    DA   ++  +    A   L     GAAP    K   G R  + +    G  Q  LS +           + ++ D+R +R+R+               S  I + +TK PETV+  LP ++    +  G       + WL+ DSHPRP L      A  +  +   +L+ +L  IFP+ D+  +   ++A MYNM D
Sbjct:   10 QLVCMGFPEEQARNALQTTAGNLEMAVNLLLSGXAIGSAGNENGALLSPTAIPAVPVATESPAAVVIKGSSSQYSHGPDGRSACTCIALTAADILASSCTAKSR----------DSDEQTSITTSFLNRAI---EEGVSRYRILRXRCDAGGGSNSSIEHLSAEEVLLKDEQGAAPEG--KHLFGVR-VVAIGGGLGVRQGALSRDPGHPLGLPSVLNGLVGDVREQRKREWNQTGNTNGSANGRPSPMIYILMTKSPETVLLCLPCDDCKKVNEKG-------RYWLV-DSHPRPHLFQRAEHAYAKPHDTMDSLLQSLRCIFPLTDLGPDIPPMMADMYNMFD 330          
BLAST of mRNA_H-paniculata_contig3206.8632.1 vs. uniprot
Match: A0A7S2UJ74_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ74_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.280e-11
Identity = 87/337 (25.82%), Postives = 134/337 (39.76%), Query Frame = 0
Query:    2 SALEQLLAMGFPEDAAKSCLQAHGGNVEEAINTLL-----STPWPEQEQAS--------------------SKVVLAP---------GSQYDVDNGRSACSCICLEAAISILGQLRGKREWTGSPDDVQGEDGERLYVVAVYIARSIAPPRRWIALFHFLEDVDDARTHRRVFEAVATSYLQIPGAAPSWLRKKCGGYRDALGLASSRGCHQSLLSSETSFSRIMEDIRNERQR--KSCPIAVTITKPPETVVAFLPPENGSDTSSAGTEAPSAPQQWLLFDSHPRPQLGLTGASVQSFEAESALVTALNLIFPVVDVESN--SLLASMYNMLDCTP 300
            +++  L++MGFP   A   L+A  G+++ A+N +L     S+  P    +S                    S +VL            SQY + NGRSAC+CI L  A + L ++         PD    E      +   ++ R +A   R + ++H L   + +  +         S  ++  A P        G   A G    +G     +     F R +  +R++  +  +S  +AV ITK PETVV  L     SD               LL DSHPRP+L  TG+         +L   L  +FP V + S+    +A MYN  D  P
Sbjct:    7 ASIAMLMSMGFPASQASEALRATDGDMDRAVNYILTGSVSSSASPPSNGSSXXXXXXXXXXXXXXXXXNKDSSMVLGTLEPIMINCDASQYTIQNGRSACTCIALAGANAFLSEM-------SKPDPDPFE-----IITPAFLQRVLA---RGVWVYHQLMQKEASTGNSEKSNVEHKSAEEVLLAVPD----TTFGSMTAQGRTVVQGIIDDDMFHPMGFRRKLASLRDDMAKTVRSSWMAVVITKTPETVVVCL-----SDNDEC-----------LLLDSHPRPELQATGSYAMMHADLDSLCLTLFKLFPPVHMTSDISETMAMMYNSFDLYP 308          
BLAST of mRNA_H-paniculata_contig3206.8632.1 vs. uniprot
Match: A0A1E7FNL0_9STRA (UBA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNL0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.920e-6
Identity = 83/345 (24.06%), Postives = 126/345 (36.52%), Query Frame = 0
Query:    4 LEQLLAMGFPEDAAKSCLQAHGGNVEEAINTLLSTPWPE--------------------------------QEQASSKVVLAPGSQYDVDN-GRSACSCICLEAAISILGQLRGKREWTGSPDDVQGEDGERLYVVAVYIARSIAPPRRWIALFHFLEDVDDARTHRRVFEAVATSYLQIPGAAPSWLRKKCGGY---RDALGLASSRGCHQSLLSSETSFSRIMEDIRNERQRKSCP--IAVTITKPPETVVAFLPPENGSDTSSAGTEAPSAPQQWLLFDSHPRPQL--GLTGASVQSFEAESALVTALNLIFPVVDVESN--SLLASMYNMLDCTPLFLKQR 306
            ++QL+ MGFP    ++ LQ   GN+E AIN LLS                                            VV    SQY   + GRSAC+CI L  A  IL                         + A ++  +IA               +    +RR+  + ++S  +I   +   +  K       +D   L+      Q +   +     ++ DIR      S    I V +TK PETV+  +P     D              + L DSHPRPQL  G+     +S     +L+ +L  +FP  D+  +   ++A MYNM D  PL  ++R
Sbjct:    9 VDQLVCMGFPNIEVRNALQITAGNLENAINHLLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNNSGVRAVVEGTTSQYTYSSDGRSACTCIALTVAGMILNXXXXXXXXXXXXXXXXXXXD---IITADFLDSAIA---------------EGVSRYRRLVTSSSSSGSEIEHLSAEEVLHKDNEQARTKDNRALSIDINHAQGM---KACLEGLVRDIRPSGNSNSSDRMICVLLTKTPETVLLCMP--TTEDXXXXXXXXXXXXXXYWLIDSHPRPQLLPGVETCYAKSHLTMDSLLQSLRDVFPFTDLGPDVPPMMADMYNMYDLYPLEGRRR 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3206.8632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKS0_ECTSI5.180e-6145.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448Z9M5_9STRA2.420e-1226.67UBA domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A7S2UJ74_9STRA2.280e-1125.82Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1E7FNL0_9STRA9.920e-624.06UBA domain-containing protein n=1 Tax=Fragilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 2..37
e-value: 1.1E-5
score: 34.9
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 3..35
e-value: 1.5E-7
score: 31.2
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 1..38
score: 12.571
NoneNo IPR availableGENE3D1.10.8.10coord: 2..39
e-value: 3.6E-11
score: 44.8
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3206contigH-paniculata_contig3206:2785..8093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3206.8632.1mRNA_H-paniculata_contig3206.8632.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3206 1995..13227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3206.8632.1 ID=prot_H-paniculata_contig3206.8632.1|Name=mRNA_H-paniculata_contig3206.8632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
MSALEQLLAMGFPEDAAKSCLQAHGGNVEEAINTLLSTPWPEQEQASSKV
VLAPGSQYDVDNGRSACSCICLEAAISILGQLRGKREWTGSPDDVQGEDG
ERLYVVAVYIARSIAPPRRWIALFHFLEDVDDARTHRRVFEAVATSYLQI
PGAAPSWLRKKCGGYRDALGLASSRGCHQSLLSSETSFSRIMEDIRNERQ
RKSCPIAVTITKPPETVVAFLPPENGSDTSSAGTEAPSAPQQWLLFDSHP
RPQLGLTGASVQSFEAESALVTALNLIFPVVDVESNSLLASMYNMLDCTP
LFLKQRAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf