prot_H-paniculata_contig31944.8600.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31944.8600.1
Unique Nameprot_H-paniculata_contig31944.8600.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
[Close]
BLAST of mRNA_H-paniculata_contig31944.8600.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.690e-20
Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 0 
Query:    1 VKDSLHPRGTVAIMVPHPWHLHAGRIYSALVHASVGLHVEDHPLLLQCKGMRAGRTSQNAVNHVRYTAYMMMLAHNDPDDGAGFTCNSSGPI----------RAALPLMNDIPVESAKTDIPPRCCLFLVNR 122
            V+  +HP GT+A++VPHPW  H  R+  A+  A VGL VEDHPL+L       GR    A NH++    M++L HN+   GA FTCN    +            ++ LM D+  E A TDI  R   FL+NR
Sbjct:  384 VRGRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVLLIHNE---GATFTCNKRVTVDDPFGFGSDASPSMQLMTDVEYEGAATDIVMRPLHFLINR 512
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31944.8600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE2.690e-2040.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31944contigH-paniculata_contig31944:1533..2240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31944.8600.1mRNA_H-paniculata_contig31944.8600.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31944 1533..2240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31944.8600.1 ID=prot_H-paniculata_contig31944.8600.1|Name=mRNA_H-paniculata_contig31944.8600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
VKDSLHPRGTVAIMVPHPWHLHAGRIYSALVHASVGLHVEDHPLLLQCKG
MRAGRTSQNAVNHVRYTAYMMMLAHNDPDDGAGFTCNSSGPIRAALPLMN
DIPVESAKTDIPPRCCLFLVNR*
back to top