mRNA_H-paniculata_contig3174.8549.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: D7FRF0_ECTSI (Tesmin-like, animal TCX proteins are associated with development of both male and female reproductiv n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF0_ECTSI) HSP 1 Score: 218 bits (556), Expect = 5.270e-64 Identity = 108/140 (77.14%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 109 AGEGEGRHPGGEGGTTTCNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEGAAGGRKRRAPDPSVA 528
AG G GR P + TCNCKKSKCLKLYCECFQR+QYC CNC +C NT TE +RQ AIQ TIERNP AFVSKFE+RAG KR+HNAGCNCKKSACLKKYCECFQAGVACGTNCKC NCKNYEGAAGGRKRRA + A
Sbjct: 427 AGCGGGRDP----LSVTCNCKKSKCLKLYCECFQRQQYCNGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAG-KRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRAVESPAA 561
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A6H5KNX0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX0_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.000e-61 Identity = 100/118 (84.75%), Postives = 106/118 (89.83%), Query Frame = 1
Query: 157 TCNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEGAAGGRKRRA 510
TCNCKKSKCLKLYCECFQR+QYC CNC +C NT TE +RQ AIQ T+ERNP AFVSKFE+RAG KR+HNAGCNCKKSACLKKYCECFQAGVACGTNCKC NCKNYEGAAGGRKRRA
Sbjct: 679 TCNCKKSKCLKLYCECFQRQQYCKGCNCMECLNTERTEDLRQLAIQGTMERNPQAFVSKFERRAG-KRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEGAAGGRKRRA 795
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A7S3YLM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLM9_HETAK) HSP 1 Score: 156 bits (395), Expect = 2.560e-45 Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 142 EGGTTTCNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKN 474
+G CNCKKSKCLKLYCECF +YC CNC DC N P TEA RQ AI++ +ERNP AF SK + A K+ H+ GCNCKKS+CLKKYCECFQAGV C CKC+ C N
Sbjct: 40 DGKKGVCNCKKSKCLKLYCECFAAGKYCGACNCVDCQNAPATEAQRQDAIKAILERNPKAFSSKINREALHKQHHSTGCNCKKSSCLKKYCECFQAGVPCSARCKCAACLN 150
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A7S2SM18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM18_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.410e-44 Identity = 69/117 (58.97%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 160 CNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEGAAGGRKRRA 510
CNCK SKCLKLYC+CF YC CNCKDC N P EA RQ A QST+E+NP+AF +K +K G H++GC+CKKS CLKKYCECF+A V CG CKC +C+NY G+ ++R+A
Sbjct: 27 CNCKNSKCLKLYCDCFASSIYCNGCNCKDCHNNPEHEAERQDARQSTLEKNPNAFQAKIKKGGQGGSEHSSGCHCKKSKCLKKYCECFEALVFCGEKCKCLDCENYAGSIALQERKA 143
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A5J4YAE3_9CHLO (CRC domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAE3_9CHLO) HSP 1 Score: 154 bits (389), Expect = 5.790e-42 Identity = 67/114 (58.77%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 160 CNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAG------GKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEG 483
CNCK S+CLKLYCECF +YC CNC +CCN E+ RQ A+++ +ERNP+AF K + A G HN GCNCKKS CLKKYCECFQAG+ CG NCKC +CKN+EG
Sbjct: 63 CNCKNSRCLKLYCECFASGRYCDGCNCVNCCNNMENESTRQSAVEAILERNPNAFRPKIQAGASEEGTVAGTARHNKGCNCKKSGCLKKYCECFQAGIYCGDNCKCIDCKNFEG 176
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A7S3AJR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJR0_9EUKA) HSP 1 Score: 147 bits (372), Expect = 8.160e-42 Identity = 69/128 (53.91%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 160 CNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEGAAGGRKRR--APDPSVASQV 537
CNCK S+CLKLYCECF QYC CNC+ C N P + R+ AI+ST+ERNP AF K R H GC+C+KS+CLKKYCECFQ G+ C CKC+ CKNYE G R AP S A+ V
Sbjct: 7 CNCKNSRCLKLYCECFASGQYCLACNCQSCHNNPENDDKRKRAIKSTLERNPQAFRPKINHAGDTLRRHTRGCHCRKSSCLKKYCECFQGGIKCTAMCKCAGCKNYEDLDGSAPARNEAPSTSPAAAV 134
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A7S3FM75_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FM75_9CHLO) HSP 1 Score: 150 bits (379), Expect = 4.290e-41 Identity = 69/126 (54.76%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 160 CNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRA-----HNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEGAAGGRKRRAPDPS 522
CNCK+S+CLKLYCECF YC DCNC+DC N E +RQ A+++T+ERNP AF K + + G HN GCNCK+S CLK+YCECFQA + C NC+C +CKNYEG+A R + A PS
Sbjct: 109 CNCKQSRCLKLYCECFASGIYCQDCNCQDCYNNKEHEQVRQEAVEATLERNPDAFRPKIQSMSPGMSVQDSLKHNKGCNCKRSFCLKRYCECFQANIFCSENCRCKDCKNYEGSAS-RLQLAQSPS 233
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A0M0JDD9_9EUKA (Tesmin tso1-like cxc domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JDD9_9EUKA) HSP 1 Score: 147 bits (372), Expect = 7.950e-41 Identity = 68/126 (53.97%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 157 TCNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKFEKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEGAAGGRKRRAPDPSVASQ 534
TCNC+ S+CLKLYCECF QYC CNC+ C N P + +R+ AI+ST+ERN AF K AHN GCNCKKS CLKKYCECFQAG+ C CKC NC N G+K P P+ Q
Sbjct: 36 TCNCRNSRCLKLYCECFASGQYCYGCNCQSCFNNPENDELRKQAIESTLERNQQAFRPKISSTEQASSAHNRGCNCKKSGCLKKYCECFQAGIKCADTCKCVNCLNRNE---GQKVVLPSPAPKRQ 158
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A2P6VRN3_9CHLO (Tesmin TSO1-like CXC 5 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRN3_9CHLO) HSP 1 Score: 154 bits (390), Expect = 8.720e-41 Identity = 70/117 (59.83%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 145 GGTTTCNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKF----EKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEG 483
GG CNCK S+CLKLYCECF +YC CNC +C N E+ RQ A+++ +ERNP+AF K E R G HN GCNCKKS CLKKYCECFQAG+AC NCKC +CKNYEG
Sbjct: 117 GGKRHCNCKNSRCLKLYCECFASGRYCDACNCLNCHNNRAHESTRQAAVEAILERNPNAFRPKIAGGSEGRHSGGARHNKGCNCKKSGCLKKYCECFQAGIACSDNCKCLDCKNYEG 233
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Match: A0A087SIS7_AUXPR (Lin-54-like protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIS7_AUXPR) HSP 1 Score: 150 bits (379), Expect = 1.010e-40 Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 160 CNCKKSKCLKLYCECFQRKQYCTDCNCKDCCNTPLTEAMRQGAIQSTIERNPSAFVSKF------EKRAGGKRAHNAGCNCKKSACLKKYCECFQAGVACGTNCKCSNCKNYEG 483
CNCK S+CLKLYCECF +YC CNC CCN E +RQ A+++ ++RNP+AF K E + G HN GCNCKKS CLKKYCECFQAG+ C NCKC +CKNY+G
Sbjct: 40 CNCKNSRCLKLYCECFASGRYCDGCNCVGCCNNQQNEGVRQSAVEAILDRNPNAFRPKIAGDVTEEGASLGAARHNKGCNCKKSGCLKKYCECFQAGIFCSENCKCCDCKNYDG 153 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3174.8549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3174.8549.1 >prot_H-paniculata_contig3174.8549.1 ID=prot_H-paniculata_contig3174.8549.1|Name=mRNA_H-paniculata_contig3174.8549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp VPAAAATTAAGARASPTLIFATTPGRGGGNIAVRDGAGEGEGRHPGGEGGback to top mRNA from alignment at H-paniculata_contig3174:575..1532- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3174.8549.1 ID=mRNA_H-paniculata_contig3174.8549.1|Name=mRNA_H-paniculata_contig3174.8549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=958bp|location=Sequence derived from alignment at H-paniculata_contig3174:575..1532- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3174:575..1532- >mRNA_H-paniculata_contig3174.8549.1 ID=mRNA_H-paniculata_contig3174.8549.1|Name=mRNA_H-paniculata_contig3174.8549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig3174:575..1532- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |