prot_H-paniculata_contig31587.8519.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31587.8519.1
Unique Nameprot_H-paniculata_contig31587.8519.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: D7FMY4_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMY4_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.870e-26
Identity = 47/70 (67.14%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALSHAAKVIR 70
            M+WVLTWF+HDL+D  +V+R+YDVLLGAH TL+LYI AAVVI+AR E+L CDC+F++VH+ LSHAAK ++
Sbjct:   30 MSWVLTWFSHDLQDQKSVSRLYDVLLGAHPTLVLYICAAVVITAREEVLACDCEFSAVHNTLSHAAKGVK 99          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A6H5JQF1_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF1_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 8.700e-25
Identity = 47/70 (67.14%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALSHAAKVIR 70
            M+WVLTWF+HDL+D   V+R+YDVLLGAH TL+LYI AAVVI+AR E+L CDC+F++VH+ LSHAAK ++
Sbjct:  304 MSWVLTWFSHDLQDQKTVSRLYDVLLGAHPTLVLYICAAVVITAREEVLACDCEFSAVHNTLSHAAKGVK 373          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A1V9ZRE5_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRE5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.670e-15
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALSHAA 66
            + WV+TWFAH L+ F  V R+YD+LL +H    LY+SA++V+  R  ILECDCD+A +H+ LS  A
Sbjct:  235 LPWVITWFAHHLKTFDQVCRLYDILLCSHPMFSLYLSASLVLHHRKRILECDCDYAEMHTVLSKLA 300          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A1E1XG71_9ACAR (Putative gtpase activator protein (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XG71_9ACAR)

HSP 1 Score: 73.6 bits (179), Expect = 9.070e-14
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALS 63
            ++WV+TWF H L D+  V R++D+ L +H  + +Y+SAAVV+ AR EIL  DCD A VHS LS
Sbjct:  169 LSWVITWFGHVLADYDTVVRLFDLFLASHPWMPIYLSAAVVLHAREEILALDCDLAPVHSYLS 231          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A131YYJ5_RHIAP (Gtpase activator protein n=6 Tax=Ixodidae TaxID=6939 RepID=A0A131YYJ5_RHIAP)

HSP 1 Score: 73.6 bits (179), Expect = 1.260e-13
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALS 63
            ++WV+TWF H L D+  V R++D+ L +H  + +Y+SAAVV+ AR EIL  DCD A VHS LS
Sbjct:  266 LSWVITWFGHVLADYDTVVRLFDLFLSSHPWMPIYLSAAVVLHARDEILALDCDLAPVHSYLS 328          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A3M6VJ51_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ51_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.700e-13
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALSH 64
            + W++TWFAH L+ F  V R+YDV L  H    LY+SA+V++ +R +IL C+CDF ++H  LS+
Sbjct:  242 LPWMITWFAHQLKRFEDVARLYDVFLVTHPLFSLYVSASVLLESREKILRCECDFGTMHGMLSN 305          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A7S2UI93_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI93_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.860e-13
Identity = 31/65 (47.69%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISA--RSEILECDCDFASVHSALS 63
            ++W++TWF+HD+RD   V R++DV + +H  +++Y+S A+++    R EILE DCDFASVH+AL+
Sbjct:  284 LSWIITWFSHDVRDTEMVKRLFDVFIVSHPLMVIYMSVAMILHPVNRIEILETDCDFASVHNALA 348          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: UPI0003EAA181 (TBC1 domain family member 20 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI0003EAA181)

HSP 1 Score: 72.4 bits (176), Expect = 2.190e-13
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALS 63
            ++W++TWF H L DF  V R+YD  L  H  + +Y +A +V+   SE+LEC+CD ASVH  LS
Sbjct:  158 LSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLHRESEVLECECDMASVHHLLS 220          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: W5MI52_LEPOC (TBC1 domain family member 20 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MI52_LEPOC)

HSP 1 Score: 72.4 bits (176), Expect = 2.270e-13
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALS 63
            ++W++TWF H L DF  V R+YD  L  H  + +Y +A +V+   SE+LEC+CD ASVH  LS
Sbjct:  210 LSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLHRESEVLECECDMASVHHLLS 272          
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Match: A0A6A3MET7_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MET7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.300e-13
Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    1 MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILECDCDFASVHSALSH 64
            + W++TWFAH LR F  V R+YDV L +H    LY+SAAV+++AR +IL C+ DF ++H  LS+
Sbjct:  235 LPWMITWFAHQLRRFRDVVRLYDVFLVSHPLFSLYVSAAVLLNARDKILRCERDFGTMHGMLSN 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31587.8519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMY4_ECTSI2.870e-2667.14Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JQF1_9PHAE8.700e-2567.14Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A1V9ZRE5_9STRA3.670e-1551.52Rab-GAP TBC domain-containing protein n=1 Tax=Thra... [more]
A0A1E1XG71_9ACAR9.070e-1452.38Putative gtpase activator protein (Fragment) n=1 T... [more]
A0A131YYJ5_RHIAP1.260e-1352.38Gtpase activator protein n=6 Tax=Ixodidae TaxID=69... [more]
A0A3M6VJ51_9STRA1.700e-1346.88Rab-GAP TBC domain-containing protein n=2 Tax=Pero... [more]
A0A7S2UI93_9STRA1.860e-1347.69Hypothetical protein n=1 Tax=Attheya septentrional... [more]
UPI0003EAA1812.190e-1347.62TBC1 domain family member 20 n=1 Tax=Lepisosteus o... [more]
W5MI52_LEPOC2.270e-1347.62TBC1 domain family member 20 n=1 Tax=Lepisosteus o... [more]
A0A6A3MET7_9STRA2.300e-1350.00Rab-GAP TBC domain-containing protein n=2 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 1..70
e-value: 2.6E-20
score: 74.5
NoneNo IPR availablePANTHERPTHR20913TBC1 DOMAIN FAMILY MEMBER 20/GTPASEcoord: 2..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..29
score: 8.655
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31587contigH-paniculata_contig31587:134..1058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31587.8519.1mRNA_H-paniculata_contig31587.8519.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31587 113..1058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31587.8519.1 ID=prot_H-paniculata_contig31587.8519.1|Name=mRNA_H-paniculata_contig31587.8519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MAWVLTWFAHDLRDFHAVTRIYDVLLGAHATLILYISAAVVISARSEILE
CDCDFASVHSALSHAAKVIRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf