mRNA_H-paniculata_contig31515.8508.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 4.900e-22 Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 7 GRGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHI 207
G GLC+PPMCLLDYKGFRMLAQAH+PLG +SLKMGT DGGRTVLN L + T AK +GL HI
Sbjct: 212 GVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAHI 278
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: A0A2P6NR06_9EUKA (Clu domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NR06_9EUKA) HSP 1 Score: 81.3 bits (199), Expect = 9.160e-16 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 RHGRGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGEDSRFDNIDWG 309
R+ GL P M L+DYKG+R++A A +P+ +L+ G+ DGG V L E + KR+GLCGH+ G R Q ++ D+EGH G D R +D+G
Sbjct: 316 RYVEGLHYPMMALVDYKGYRVIALAILPIDKGTLRYGSDDGGMNVHAEDEELNEKMELAGKRLGLCGHVTGTR---QKKVIYGPGDIEGHRGHDGRLYVVDFG 415
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: A0A6H5KFE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE7_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 5.840e-15 Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 10 RGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGED 282
RGL CL+DYKGFRM AQA +P+ SL+ G+ DGG+TV N +L + + AK++ LC H V + +++A D+EGH GED
Sbjct: 47 RGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSDDGGKTVHNDDESLAKKLKAAAKKLNLCTHRVNDK------DMYSACDIEGHVGED 131
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 2.140e-12 Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 1
Query: 10 RGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGE 279
RGL CL+DYKGFRM AQA +P+ +L+ G+ D GRTV N L + + AK++ L H V + +++A D+EGH GE
Sbjct: 126 RGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTHWVNDK------EMYSACDIEGHVGE 209
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: A0A2P6NM88_9EUKA (Clu domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NM88_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 3.000e-12 Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 1 RHGRGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGEDSRFDNIDWG 309
R+ GL P M L+DYKG+R+LA A +P+ S+L+ G+ D GR V L E + +R+ L GH+ G ++ D+EGH G D R +D+G
Sbjct: 370 RYVPGLRYPLMTLVDYKGYRVLAMAILPIDRSTLRYGSDDAGRHVHMEDEELNEKMKLAGERLNLAGHVTGSSSDATKI-IYGPGDIEGHRGHDGRLYVVDFG 471
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 5.560e-12 Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 10 RGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGE-DSRF 291
RGL CL+DYKGFRM AQA +P+ SL+ G+ +GG+TV N +L + + AK++ L H V + +++A D+EGH GE DS +
Sbjct: 362 RGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTHRVNDK------DMYSACDIEGHVGEGDSHY 450
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: L8H9K5_ACACA (Leucine rich repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9K5_ACACA) HSP 1 Score: 68.2 bits (165), Expect = 3.760e-11 Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 1
Query: 4 HGRGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGEDSRFDNIDW 306
H G+CVP M ++DY+GFR++AQA +P+G +L G+ D G V + +A + L H V + P ++ D+EGH G D RF ID+
Sbjct: 716 HHFGICVPLMTIIDYRGFRLVAQALLPIGDDTLVYGSSDAGVNVRTDSREIEKALAAACYELNLAKHAVYPKHG-PPVAMYGPGDMEGHFGLDGRFYLIDF 815
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: A0A7S4PFY5_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PFY5_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 4.880e-11 Identity = 33/97 (34.02%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 16 LCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGEDSRFDNIDW 306
+C+P M LLD+ GFR++A + +P+ ++L+ GT D G+T+ + L E ++ +++ L H+V ++ ++AAAD+EGH+G+D R +D+
Sbjct: 148 ICLPLMSLLDFNGFRLIAISLIPVNKTTLRYGTADAGKTIYVE-SPLRELMKDAGEKLNLQPHVVRCLDGIER-EVYAAADIEGHQGKDGRVYLLDF 242
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: A0A7S1VBR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VBR0_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 6.850e-11 Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 16 LCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGEDSRFDNID 303
+ +P M ++DY+G+R+LA A +P+ S+ G+PDGG TV++S + A ++GL H V G L A DVEGH G D R+ ID
Sbjct: 258 IAIPLMAIVDYRGYRLLAVAVLPIDASTCVYGSPDGGATVVSSDPDFAASMACVADQLGLARHSVYG------VELCAPGDVEGHLGRDGRYYAID 347
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Match: F4Q305_CAVFA (Clu domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q305_CAVFA) HSP 1 Score: 67.4 bits (163), Expect = 6.920e-11 Identity = 34/99 (34.34%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 10 RGLCVPPMCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAKRMGLCGHIVGGRLALQPYRLFAAADVEGHEGEDSRFDNIDW 306
+GL VP M +DY+GFR++A + +P+ +L G+ D G+TV S T + AK + L H+V + ++ D+EGH G D RF +D+
Sbjct: 510 KGLHVPLMAYIDYRGFRLMAMSLLPITKKTLVYGSSDAGQTVHTSNTMFNHLFTSAAKVLNLKPHVVEDSTGGELRTIYGPIDIEGHVGTDGRFYLLDY 608 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31515.8508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31515.8508.1 >prot_H-paniculata_contig31515.8508.1 ID=prot_H-paniculata_contig31515.8508.1|Name=mRNA_H-paniculata_contig31515.8508.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp MCLLDYKGFRMLAQAHVPLGPSSLKMGTPDGGRTVLNSLTALTEATQNTAback to top mRNA from alignment at H-paniculata_contig31515:1474..2216- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31515.8508.1 ID=mRNA_H-paniculata_contig31515.8508.1|Name=mRNA_H-paniculata_contig31515.8508.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=743bp|location=Sequence derived from alignment at H-paniculata_contig31515:1474..2216- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31515:1474..2216- >mRNA_H-paniculata_contig31515.8508.1 ID=mRNA_H-paniculata_contig31515.8508.1|Name=mRNA_H-paniculata_contig31515.8508.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at H-paniculata_contig31515:1474..2216- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |