mRNA_H-paniculata_contig1132.850.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: D8LJE0_ECTSI (Putative Del transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE0_ECTSI) HSP 1 Score: 243 bits (619), Expect = 5.030e-69 Identity = 148/243 (60.91%), Postives = 167/243 (68.72%), Query Frame = 1 Query: 247 FANYRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKLSEPEDVSNN 975 +++Y RKDKSLGLLCGRFVEVY QH + + A P XXXXXXXXX A ++ D G+ E +GM+ELD+AA ELGVARRRIYDVINILES+CVVTRARKNTYRWHGK N++ TLRQLQRT VFPEEV +NGMTECLKQ+ L +G AVG LGGPR DG KEKSLGGLCRRFVQLFLVGNDVVSVGEAA KLSEP DV+ + Sbjct: 394 YSSYCRKDKSLGLLCGRFVEVYGHSQHFRDR-------VAGGGPVXXXXXXXXXXXXX--------XAGGKKGDKGDGE--------------EGMIELDKAAAELGVARRRIYDVINILESVCVVTRARKNTYRWHGKKNLILTLRQLQRTATHVFPEEVAKNGMTECLKQAKL----------IGN-AVGSLGGPRADGTKEKSLGGLCRRFVQLFLVGNDVVSVGEAAEKLSEPSDVAGS 596
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A6H5L5C3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C3_9PHAE) HSP 1 Score: 238 bits (606), Expect = 4.280e-67 Identity = 141/243 (58.02%), Postives = 160/243 (65.84%), Query Frame = 1 Query: 247 FANYRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKLSEPEDVSNN 975 +++Y RKDKSLGLLCGRFVEVY QH + D+ A XXXXX D G+ E +GM+ELD+AA ELGVARRRIYDVINILES+CVVTRARKNTYRWHGK N++ TLRQLQRT VFPEEV +NGMTECLKQ+ L +G A+G LGGPR DG KEKSLGGLCRRFVQLFLVGNDVVSVGEAA KLS+P DV+ + Sbjct: 410 YSSYCRKDKSLGLLCGRFVEVYGHSQHFR------DRVAGGXXXXXXXXXXXXX------------XXXXXXGDKGDDE--------------EGMIELDKAAAELGVARRRIYDVINILESVCVVTRARKNTYRWHGKKNLILTLRQLQRTATHVFPEEVAKNGMTECLKQAKL----------IGN-AIGSLGGPRADGTKEKSLGGLCRRFVQLFLVGNDVVSVGEAAEKLSDPSDVAGS 609
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S3Q8J9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8J9_9STRA) HSP 1 Score: 108 bits (271), Expect = 8.770e-23 Identity = 86/270 (31.85%), Postives = 117/270 (43.33%), Query Frame = 1 Query: 256 YRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSS----LKPYSDSNSGGVGQQAV---GLLGGPRIDGQ--------------------------------KEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL 948 YRRKDKSLG+LC F+ Y ++QH E P A P P V+ +D A+ L V RRRIYD+INILE++ VVTR KNTY W G DN+ TLR++Q +FP++VV NG+ E + + K + + +GGVG V G DG KEKSLG L ++F+QLFLVGN+ +++ EA+ K+ Sbjct: 75 YRRKDKSLGVLCANFMRRYNKIQH-----EKPTDA-------------------------PHPPEVT----------------------------IDEASQSLMVERRRIYDIINILEAIEVVTRKGKNTYNWFGMDNINDTLRKMQTEAFTLFPQDVVFNGLHEVKLEEAEAAVAKVAAQAGNGGVGTVPVKEDGTKAEDEADGDSSSLPTGFAMLLASAEQVEAKKKKPKAKKGTSKEKSLGRLSQKFIQLFLVGNETITLEEASDKI 286
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S1B9K5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9K5_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.520e-21 Identity = 56/138 (40.58%), Postives = 87/138 (63.04%), Query Frame = 1 Query: 535 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL 948 + +D AA LGV RRRIYD+INILES+ +V R KNTY W+GK+++ L +LQ+ ++PE+ NG+ L + S+ SD+ + + + K+KSLG L ++F+Q+FLVGN+V+S+ EA+ K+ Sbjct: 51 ISIDAAANALGVERRRIYDIINILESIEIVRRKCKNTYIWYGKEHLGYVLARLQQQAFTMWPEDAKTNGL---LSEGSIILNSDNKT--------------KTESNKDKSLGRLSQKFIQMFLVGNNVLSLAEASEKI 171
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S2QRQ0_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2QRQ0_9EUKA) HSP 1 Score: 88.2 bits (217), Expect = 9.490e-16 Identity = 79/254 (31.10%), Postives = 113/254 (44.49%), Query Frame = 1 Query: 226 RDEYSCKFANYRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGND-VVSVGEAAVKLSE-----PEDVS 969 + + K NY RKDKSLGLLCGRF+++Y +KE G++ + LD AA LGV RRRIYD++NILES+ +V+R KN Y WHG + A L +++ +E R+ M +C+ S S+ N+G + G + + D ++EKSLG L RRFVQ+F VVS+ +A L + P+DVS Sbjct: 31 KTQAKTKARNYSRKDKSLGLLCGRFLKLY------NNKE-------------------------------------------GKN------------------ICLDEAADTLGVERRRIYDIVNILESIEIVSRLGKNKYTWHGVKGLAAALSKIK--------DETDRS-MGKCVPDDSA---SNLNAGSSSRYKNGSI---KKDSRREKSLGLLSRRFVQMFFTSESRVVSLDQAGNALVDGKPATPKDVS 202
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S4NF84_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NF84_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.250e-15 Identity = 88/267 (32.96%), Postives = 120/267 (44.94%), Query Frame = 1 Query: 256 YRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGG----VGQQAVGLLGGPRIDGQK--------------------------------EKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL 948 Y RKDKSLGLLC +FVE Y D AA A + + XXXXXXXXX S AV QE+ G+ +V + AA LGV RRRIYD+INILE++ VV+R KNTY WHG + + T ++QR L P +N C+ + +D + + L R++G K +KSLG L R+F+QLFLVG +++ +A+ K+ Sbjct: 779 YNRKDKSLGLLCEKFVETYT------------DLAARGAAAAVANANAXXXXXXXXXGG--SDAAVLQEAGCTHEPD------------GRLLVSISSAARHLGVERRRIYDIINILEAIGVVSRKCKNTYWWHGLEGLEVTFGRMQRECVLGGPPGAKQNFSKVCVDTPAAAAAADLRDPKWREWAAENGIDKLVLKRLEGDKKGDNRSKFDADRRGDYNSSNDGSGVVAGTAVPQKSLGLLSRKFIQLFLVGYVNIALTDASEKI 1019
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A8C5DZC5_9TELE (E2F transcription factor 7 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5DZC5_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 1.950e-15 Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 535 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL--SEPEDVSNN 975 + LD A LGV RRRIYD++N+LESL +V R KN+Y WHG+ + A L++LQR G EE M L Q S++P + + G+ G GG R K+KSL + ++FV LFLV +AA K+ E +D S++ Sbjct: 179 ISLDEVATSLGVERRRIYDIVNVLESLMIVGRMAKNSYIWHGRQRLEARLQELQRRGR----EEGYHRLME--LAQFSIRPTALVHEDDSGEGDTGNGGGNR----KDKSLRIMSQKFVMLFLVSKTQTVTLDAAAKILIEESQDSSSH 317
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S0CIQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIQ8_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.980e-15 Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 535 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLF 900 + +D AA LGV RRRIYD+INILES+ VV R KNTY W G D++ +LQ+ ++P++ +NG+ + ++S P + +S +G+K+K L L +RF+QLF Sbjct: 35 ISIDAAAASLGVERRRIYDIINILESIHVVRRKCKNTYTWRGTDHLPQVFAKLQKEAMKIWPDDARQNGIVDEDEKSVPSPGRNEDS-------------CNEEGEKKKILWRLSQRFIQLF 143
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A873AG86_9SALA (E2F transcription factor 7 n=1 Tax=Ambystoma andersoni TaxID=282260 RepID=A0A873AG86_9SALA) HSP 1 Score: 87.4 bits (215), Expect = 2.110e-15 Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 535 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVV-----RNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGN-DVVSVGEAA-VKLSEPEDVSN 972 + LD A LGV RRRIYD++N+LESL +V+R KN Y WHG + + TL++LQ GAL EE + ++G E K + D SG + A + +K+KSL + ++FV LFLV ++V++ AA + + E +DVS+ Sbjct: 137 ISLDEVAASLGVERRRIYDIVNVLESLHLVSRVAKNQYCWHGLNGLNQTLQRLQCLGALQKYEEQIAHFQHKDGDMEYRSGDRKKTFRDYQSGHLFDFAEADGHSAAANSRKDKSLRIMSQKFVMLFLVSTTNIVTLDIAAKILIDESQDVSD 289
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A873A8H8_AMBME (E2F transcription factor 7 n=1 Tax=Ambystoma mexicanum TaxID=8296 RepID=A0A873A8H8_AMBME) HSP 1 Score: 87.4 bits (215), Expect = 2.790e-15 Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 535 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVV-----RNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGN-DVVSVGEAA-VKLSEPEDVSN 972 + LD A LGV RRRIYD++N+LESL +V+R KN Y WHG + + TL++LQ GAL EE + ++G E K + D SG + A + +K+KSL + ++FV LFLV ++V++ AA + + E +DVS+ Sbjct: 168 ISLDEVAASLGVERRRIYDIVNVLESLHLVSRVAKNQYCWHGLNGLNQTLQRLQCLGALQKYEEQIAHFQHKDGDMEYRSGDRKKTFRDYQSGHLFDFAEADGHSAAANSRKDKSLRIMSQKFVMLFLVSTTNIVTLDIAAKILIEESQDVSD 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1132.850.1 >prot_H-paniculata_contig1132.850.1 ID=prot_H-paniculata_contig1132.850.1|Name=mRNA_H-paniculata_contig1132.850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp LDGAGQGVTPPAKLARGKVKGYDKDKDVNLRGCEQGAGTVGIATPRSMNLback to top mRNA from alignment at H-paniculata_contig1132:25943..28828+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1132.850.1 ID=mRNA_H-paniculata_contig1132.850.1|Name=mRNA_H-paniculata_contig1132.850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2886bp|location=Sequence derived from alignment at H-paniculata_contig1132:25943..28828+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1132:25943..28828+ >mRNA_H-paniculata_contig1132.850.1 ID=mRNA_H-paniculata_contig1132.850.1|Name=mRNA_H-paniculata_contig1132.850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig1132:25943..28828+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |