mRNA_H-paniculata_contig31376.8471.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI) HSP 1 Score: 170 bits (431), Expect = 3.060e-49 Identity = 82/105 (78.10%), Postives = 94/105 (89.52%), Query Frame = 3
Query: 186 AVGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKINESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
A GARGAGYGLDAELAR+REA YDH AED+ RAWIEA+T E GPFG++LR+GV++CKLVN I PG+V+KINESRMPFKQMENISNFLK+CR +GVAEHSLFET
Sbjct: 3 AFGARGAGYGLDAELARQREAKYDHSAEDQARAWIEAVTGERVVGPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFET 107
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.220e-38 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 3
Query: 189 VGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKINESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
VGARG GYGLDAELARK A YD+ E + WIEA+T+ EG F +L++G +LCKL+N I PG+VKKIN S MPFKQMENIS +LK CR LGVAEHSLFET
Sbjct: 2 VGARGGGYGLDAELARKAAANYDYAGEHAAQEWIEAVTRVKFEGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFET 105
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA) HSP 1 Score: 136 bits (343), Expect = 9.720e-37 Identity = 66/101 (65.35%), Postives = 78/101 (77.23%), Query Frame = 3
Query: 198 RGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKINESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
RG GYGLDAELA K A YD E + W+EA+T EG F SL++G LLC+L+N I PG++K+IN S+MPFKQMENISNFLKACRTLGVAE+SLFET
Sbjct: 4 RGGGYGLDAELALKAAAKYDFEGERTAQEWMEAVTGVKFEGSFASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFET 104
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA) HSP 1 Score: 132 bits (332), Expect = 8.800e-34 Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 3
Query: 189 VGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKINESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
V ARG GYGLDA+LA+ R YD+ E EV+ WIEA+T E G FGESL++G +LCKL+N I PGS++ IN S++PFKQMEN+S FL+ CR LGVAEH LFET
Sbjct: 287 VSARGGGYGLDAQLAQIRLDKYDYDLEAEVKEWIEAVTGEAFPGGFGESLKDGRILCKLINAIKPGSIRIINTSKLPFKQMENVSVFLRNCRALGVAEHDLFET 390
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE) HSP 1 Score: 132 bits (333), Expect = 4.070e-33 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 3
Query: 180 RQAVGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKINESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
R G RG GYGLDAELA +REA YD + WIE +T E FGE L++G LC L+N I PG+V+++N+SRMPFKQMEN+SNFLKACR +GVAEHSLFET
Sbjct: 336 RSPTGGRGGGYGLDAELAARREANYDXXXXXXAQEWIEDVTGERFAEGFGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFET 442
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A2D4CAP3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAP3_PYTIN) HSP 1 Score: 124 bits (310), Expect = 8.970e-31 Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 3
Query: 189 VGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKIN-ESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
V ARG GYGLDAELA++ YD+ EDE R WIEAIT FGE LR+GV+LC+L N I PG +++I +S+MPFK MEN+S FLKACRT+GV E+ LFET
Sbjct: 6 VKARGGGYGLDAELAQRAAEKYDYEMEDEARQWIEAITGREIGASFGEGLRDGVILCELANKIHPGVIRRIETKSKMPFKLMENVSAFLKACRTIGVNEYELFET 110
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: K3WZS5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZS5_GLOUD) HSP 1 Score: 124 bits (311), Expect = 3.800e-30 Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 3
Query: 180 RQAVGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKIN-ESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
R V ARG GYGLDAELAR+ YD+ EDE RAWIEA++ FGE LR+GV+LC LVN I P VK+I +S+MPFK MEN+S+FL+ACRT+GV+E LFET
Sbjct: 3 RPPVQARGGGYGLDAELARRAAERYDYEMEDEARAWIEAVSGMAIGDEFGEGLRDGVILCTLVNKIHPDIVKRIETKSKMPFKLMENVSSFLRACRTMGVSEFDLFET 110
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A8B8A1K2_ACAPL (Calponin n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A1K2_ACAPL) HSP 1 Score: 114 bits (285), Expect = 6.140e-29 Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 3
Query: 207 GYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKINESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
GYG+ AELA K A YD + E E + WIEA+T E +G F E L++GV+LCKL+N + PGSVKKINES+M FK MENI NFL AC G + LF+T
Sbjct: 7 GYGMTAELADKTAAKYDPQQEREAQDWIEAVTGERVQGSFQEGLKSGVILCKLINVLQPGSVKKINESKMAFKMMENIGNFLDACYAYGCPKADLFQT 104
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: H3H261_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H261_PHYRM) HSP 1 Score: 119 bits (298), Expect = 4.360e-28 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 3
Query: 198 RGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKIN-ESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
RG G+GLDAELARK YD+ E+E RAW+E I++ P FGE LR+GV+LC + N I+PG VK++ +S+MPFK MEN+S FLKACR +GV E LFET
Sbjct: 1031 RGGGFGLDAELARKAAERYDYDMENEARAWLETISEMPIGDDFGEGLRDGVVLCSVANKINPGVVKRVETKSKMPFKLMENVSAFLKACRVMGVNEFDLFET 1132
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Match: A0A5D6XYZ9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYZ9_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.020e-28 Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 3
Query: 180 RQAVGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCEGPFGESLRNGVLLCKLVNCISPGSVKKIN-ESRMPFKQMENISNFLKACRTLGVAEHSLFET 500
R V RG GYGLDAELAR+ YD+ EDE R WIEA+ + FGE LR+GV+LC LVN I PG V ++ +S+MPFK MEN+S FL+ACR +GV E LFET
Sbjct: 3 RPPVQTRGGGYGLDAELARRAAERYDYEMEDEARDWIEAVAHKDIGEDFGEGLRDGVVLCALVNAIHPGIVPRVETKSKMPFKLMENVSAFLRACRKIGVNEFDLFET 110 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31376.8471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31376.8471.1 >prot_H-paniculata_contig31376.8471.1 ID=prot_H-paniculata_contig31376.8471.1|Name=mRNA_H-paniculata_contig31376.8471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MSAFDRQAVGARGAGYGLDAELARKREAGYDHRAEDEVRAWIEAITQEPCback to top mRNA from alignment at H-paniculata_contig31376:346..1607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31376.8471.1 ID=mRNA_H-paniculata_contig31376.8471.1|Name=mRNA_H-paniculata_contig31376.8471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1262bp|location=Sequence derived from alignment at H-paniculata_contig31376:346..1607- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31376:346..1607- >mRNA_H-paniculata_contig31376.8471.1 ID=mRNA_H-paniculata_contig31376.8471.1|Name=mRNA_H-paniculata_contig31376.8471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig31376:346..1607- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |