prot_H-paniculata_contig31156.8427.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31156.8427.1
Unique Nameprot_H-paniculata_contig31156.8427.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
BLAST of mRNA_H-paniculata_contig31156.8427.1 vs. uniprot
Match: A0A6H5JEG6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEG6_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 5.330e-24
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 MNYDEEGYVAVPVNEGEWKDLMALEFEAATRQGATKAAVVGEDGIVLVVSKEGKVLRRGVGVPTWKMIRDDVDPP 75
            ++Y+E+GYVA PV+E  W+ LM  EFEAA RQG   A   G+DGIVL+VSK+GKVLRRGVG+P W +IRDDVDPP
Sbjct:  327 LSYEEQGYVAAPVDEDGWRALMREEFEAAERQGVV-AQSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDPP 400          
BLAST of mRNA_H-paniculata_contig31156.8427.1 vs. uniprot
Match: A0A835Z880_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z880_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 4.540e-15
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    3 YDEEGYVAVPVNEGEWKDLMALEFEAATRQGATKAAVVGEDGIVLVVSKEGKVLRRGVGVPTWKMIRDDVDP 74
            Y ++G+V  P  E EW+ L+A E   A RQG +KAA   + G+VLVVS++GKVLRRG+G+P W MIR D+ P
Sbjct:  243 YFKQGFVGEPAEEDEWRALVAEEIRDADRQGNSKAA---KQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYP 311          
BLAST of mRNA_H-paniculata_contig31156.8427.1 vs. uniprot
Match: A0A0G4FNK1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FNK1_VITBC)

HSP 1 Score: 66.2 bits (160), Expect = 6.880e-11
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    2 NYDEEGYVAVPVNEGEWKDLMALEFEAATRQGATKAAVVGEDGIVLVVSKEGKVLRRGVGVPTWKMIRDDVDP 74
            ++ ++GY+A PV+E  W+  +  E + A RQGA KA    E+GIVLVV  +GKV+ R VG P W ++ + V+P
Sbjct:  378 SWRKQGYIAEPVDEESWRAALRKEIQDAERQGAGKAK---EEGIVLVVRNDGKVVARRVGTPDWTLVLEAVEP 447          
BLAST of mRNA_H-paniculata_contig31156.8427.1 vs. uniprot
Match: A0A7S2S088_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S088_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 3.240e-5
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   17 EWKDLMALEFEAATRQ--GATKAAVVGEDGIVLVVSKEGKVLRRGVGVPTWKMIRDDVDP 74
            +W   +  E + A  Q  GAT   +  E GIV+V++++GK++RRG+GVP W  + DD+ P
Sbjct:  239 DWASYIQRELDTAVSQSPGATTVDLKAE-GIVVVLNRDGKIVRRGLGVPLWATVIDDLAP 297          
BLAST of mRNA_H-paniculata_contig31156.8427.1 vs. uniprot
Match: A0A7S0CW08_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CW08_9EUKA)

HSP 1 Score: 48.5 bits (114), Expect = 9.280e-5
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    8 YVAVPVNEGEWKDLMALEFEAATRQGATKAAVVGEDGIVLVVSKEGKVLRRGVGVPT 64
            +VA+P +   W+ L+A EF+    QG T    +  DGIVL + + G+V++RGVG+P+
Sbjct:  160 FVAIPQDMSRWRSLLAQEFKYGFDQGNTN---IFRDGIVLAIDELGRVVQRGVGLPS 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31156.8427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JEG6_9PHAE5.330e-2465.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z880_9STRA4.540e-1552.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4FNK1_VITBC6.880e-1143.84Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2S088_9STRA3.240e-540.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0CW08_9EUKA9.280e-540.35Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31156contigH-paniculata_contig31156:964..2608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31156.8427.1mRNA_H-paniculata_contig31156.8427.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31156 929..2796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31156.8427.1 ID=prot_H-paniculata_contig31156.8427.1|Name=mRNA_H-paniculata_contig31156.8427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MNYDEEGYVAVPVNEGEWKDLMALEFEAATRQGATKAAVVGEDGIVLVVS
KEGKVLRRGVGVPTWKMIRDDVDPPKKKK*
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