prot_H-paniculata_contig11307.840.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11307.840.1
Unique Nameprot_H-paniculata_contig11307.840.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
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BLAST of mRNA_H-paniculata_contig11307.840.1 vs. uniprot
Match: A0A6H5KK33_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK33_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.470e-13
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0 
Query:   10 TRVLLLPTDFEAVCRIYSVALAAVTEGIPWIRAVDVWHISSVAEHETVFLPE 61
            T +L  P  +EAVC IYS A+ A+TEG+PW+RA DVWH+SS+ +H+ VF PE
Sbjct: 2572 TSILRWPCPYEAVCNIYSAAVKALTEGLPWVRAADVWHVSSIPDHKKVFEPE 2623
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BLAST of mRNA_H-paniculata_contig11307.840.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.020e-11
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:   20 EAVCRIYSVALAAVTEGIPWIRAVDVWHISSVAEHETVFLPE 61
            EAVC+IYS A+ A+TEG+PW+RA DVWH+SS+ +H+ VF PE
Sbjct: 5290 EAVCKIYSAAVKALTEGLPWVRAADVWHVSSIPDHKKVFEPE 5331
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11307.840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KK33_9PHAE3.470e-1357.69C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LEV4_ECTSI2.020e-1164.29C2 domain containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11307contigH-paniculata_contig11307:4637..7124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11307.840.1mRNA_H-paniculata_contig11307.840.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11307 4637..7125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11307.840.1 ID=prot_H-paniculata_contig11307.840.1|Name=mRNA_H-paniculata_contig11307.840.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
GANEVVTRKTRVLLLPTDFEAVCRIYSVALAAVTEGIPWIRAVDVWHISS
VAEHETVFLPESLSGNDESGSVSEEDESG
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