prot_H-paniculata_contig11307.839.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11307.839.1
Unique Nameprot_H-paniculata_contig11307.839.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length81
Homology
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BLAST of mRNA_H-paniculata_contig11307.839.1 vs. uniprot
Match: A0A6H5KK33_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK33_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.970e-23
Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 0 
Query:    7 ETGIHQRREVRLKVLSQSVGRWSGPLPLASGLVRRAIEHGDVFLVVEESVCVANASWNSIWLETMPHKHVSSDTA 81
            E+G    R V L    +SVGRWSGPLP+ASGLV+RA+E GD+FLV+E +V VAN SW+SIW ETMPHKHVSS +A
Sbjct: 2260 ESGDAGARSVTLAGDLESVGRWSGPLPMASGLVKRAVERGDIFLVIESTVYVANVSWSSIWQETMPHKHVSSSSA 2334
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BLAST of mRNA_H-paniculata_contig11307.839.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 5.830e-14
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 0 
Query:   23 QSVGRWSGPLPLASGLVRRAIEHGDVFLVVEESVCVANASWNSIWLETM 71
            +SVGRWSGPLP+ASGLV+RA+E GD+FLV+E +V VAN SW+SI  E +
Sbjct: 5244 ESVGRWSGPLPMASGLVKRAVERGDIFLVIESTVYVANVSWSSILQEAV 5292
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11307.839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KK33_9PHAE1.970e-2365.33C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LEV4_ECTSI5.830e-1467.35C2 domain containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11307contigH-paniculata_contig11307:3337..4213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11307.839.1mRNA_H-paniculata_contig11307.839.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11307 3337..4213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11307.839.1 ID=prot_H-paniculata_contig11307.839.1|Name=mRNA_H-paniculata_contig11307.839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp
MAIRRIETGIHQRREVRLKVLSQSVGRWSGPLPLASGLVRRAIEHGDVFL
VVEESVCVANASWNSIWLETMPHKHVSSDTA
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