prot_H-paniculata_contig3087.8352.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3087.8352.1
Unique Nameprot_H-paniculata_contig3087.8352.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length198
Homology
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BLAST of mRNA_H-paniculata_contig3087.8352.1 vs. uniprot
Match: D7G395_ECTSI (Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G395_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.990e-39
Identity = 88/175 (50.29%), Postives = 105/175 (60.00%), Query Frame = 0 
Query:    7 RLTGRVDKLWDEGFQSAEVDLWEPCRPVLVYHNGSEMSWVDTTARLDNVEHCRRLRTLGALLALAVTNGCRLPVDLPDLFFRWLLLG----------------TGDRFDLSVEDVVALDPSLGKIFKTLREEITAQDDDEQNITDGVRGDEKLQGLLELEGLPTTTSPEVYMAHM 165
            R + RV KLW +GFQS E  L E   PVLVY  GSE  W+D  A   N EH +RLRTLGALLAL+VTN CRLPV+LPDLFFRWLLLG                +   F+ SVED+VALD SL + F+ L+              D V+ D+ L+GLLE+E LP  TS   Y+AHM
Sbjct: 2154 RYSARVTKLWVDGFQSEEAHLQEASCPVLVYQEGSESKWLDAKADRSNDEHRKRLRTLGALLALSVTNSCRLPVELPDLFFRWLLLGGESAVVKQKHGQQLSPSCPSFEPSVEDMVALDKSLERPFEALK--------------DAVQSDDALKGLLEIEDLPADTSAADYIAHM 2314
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3087.8352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G395_ECTSI3.990e-3950.29Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2160.10coord: 98..173
e-value: 5.3E-9
score: 37.9
NoneNo IPR availableGENE3D3.90.1750.10coord: 20..194
e-value: 5.3E-9
score: 37.9
IPR000569HECT domainPFAMPF00632HECTcoord: 46..194
e-value: 1.1E-6
score: 28.4
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 20..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3087contigH-paniculata_contig3087:425..2956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3087.8352.1mRNA_H-paniculata_contig3087.8352.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3087 425..2956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3087.8352.1 ID=prot_H-paniculata_contig3087.8352.1|Name=mRNA_H-paniculata_contig3087.8352.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp
TNPEVVRLTGRVDKLWDEGFQSAEVDLWEPCRPVLVYHNGSEMSWVDTTA
RLDNVEHCRRLRTLGALLALAVTNGCRLPVDLPDLFFRWLLLGTGDRFDL
SVEDVVALDPSLGKIFKTLREEITAQDDDEQNITDGVRGDEKLQGLLELE
GLPTTTSPEVYMAHMVRQTFVEPVEWQISEIRQAFRRALPKNVLYDAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase