mRNA_H-paniculata_contig30608.8295.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: D7G3F9_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F9_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 2.860e-21 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 SLLDQVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
S + QVAAGFYHTLCLTGP L + G G V ++K+LSSDLYRLL+NP+ SDVTF VEG++VYGHR
Sbjct: 368 SFVCQVAAGFYHTLCLTGPPLERKAGHGSAFVVRDSKSLSSDLYRLLNNPSQSDVTFTVEGKVVYGHR 435
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: A0A6H5JNV5_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV5_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.590e-20 Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 SLLDQVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
S + QVAAGFYHTLCLTGP L + G G V ++K+LSSDLYRLL+NP+ SDV F V+G++VYGHR
Sbjct: 150 SFVCQVAAGFYHTLCLTGPPLERKAGIGNAFVVRDSKSLSSDLYRLLNNPSRSDVAFAVDGKVVYGHR 217
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: K3WGV0_GLOUD (BTB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGV0_GLOUD) HSP 1 Score: 67.0 bits (162), Expect = 2.380e-11 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 13 QVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNP-AGSDVTFHVEGQLVYGHR 204
+VAAGFYH++CLTG + + G G N TL+SDL RLL+NP A SDVTF VEGQ Y HR
Sbjct: 390 KVAAGFYHSVCLTGDL--DGAGAIGGSGKANKATLNSDLRRLLNNPDAHSDVTFLVEGQPFYAHR 452
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: A0A7S2RFP8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFP8_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.290e-11 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 7 LDQVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
+ + AGFYH++CLT P S++ TLSSDL +L+NPA SDVTFHVEG+ +Y HR
Sbjct: 406 VTSIGAGFYHSVCLTEPDTSQQH---------PTSTLSSDLRNMLNNPARSDVTFHVEGRPIYAHR 462
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: A0A7S3XQJ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ6_HETAK) HSP 1 Score: 65.1 bits (157), Expect = 1.150e-10 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 16 VAAGFYHTLCLTGPML-SERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
VAAGFYHT+ L GP L ++R GGR A A TL+SDL R+L+NPA SDVTF ++G+ V+ HR
Sbjct: 451 VAAGFYHTVLLAGPPLDADR---GGRRAP--AATLASDLRRMLNNPARSDVTFLLQGRAVHAHR 509
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: A0A2R5FYH2_9STRA (RCC1 and BTB domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYH2_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.030e-9 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 7 LDQVAAGFYHTLCLTG-PMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
+ Q+AAGFYH++CLTG P S V TLS DL ++L+NPA +DVTF VEG+ +Y HR
Sbjct: 552 VSQIAAGFYHSVCLTGQPDRSSEV---------PTSTLSLDLRKMLNNPARADVTFVVEGRPLYAHR 609
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: A0A3R7YCR5_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7YCR5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.540e-9 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 13 QVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
++AAGFYH++C+TG G R A A +L DL L+DNP SDV F V+G++VY HR
Sbjct: 283 KIAAGFYHSVCITGTSSF----GPTRGAAAAAPSLGRDLASLVDNPVRSDVRFVVDGRVVYAHR 342
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: W4GLY2_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLY2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.650e-9 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 13 QVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
++AAGFYH++C+TG G R A A +L DL L+DNP SDV F V+G++VY HR
Sbjct: 362 KIAAGFYHSVCITGTSSF----GPTRGAAAAAPSLGRDLASLVDNPVRSDVRFVVDGRVVYAHR 421
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: W4GMU2_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMU2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.660e-9 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 13 QVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
++AAGFYH++C+TG G R A A +L DL L+DNP SDV F V+G++VY HR
Sbjct: 362 KIAAGFYHSVCITGTSSF----GPTRGAAAAAPSLGRDLASLVDNPVRSDVRFVVDGRVVYAHR 421
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Match: A0A7S2RUI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUI3_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 9.180e-9 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 16 VAAGFYHTLCLTG---PMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPAGSDVTFHVEGQLVYGHR 204
VAAGFYHTL LTG P+ R G +L SDL ++L+NP+ SDVTF VEGQ ++ HR
Sbjct: 393 VAAGFYHTLVLTGKPHPLADRRDG----------PSLGSDLGKMLNNPSRSDVTFIVEGQPIFAHR 448 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30608.8295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30608.8295.1 >prot_H-paniculata_contig30608.8295.1 ID=prot_H-paniculata_contig30608.8295.1|Name=mRNA_H-paniculata_contig30608.8295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp SLLDQVAAGFYHTLCLTGPMLSERVGGGGRDAVGNAKTLSSDLYRLLDNPback to top mRNA from alignment at H-paniculata_contig30608:433..639- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30608.8295.1 ID=mRNA_H-paniculata_contig30608.8295.1|Name=mRNA_H-paniculata_contig30608.8295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=207bp|location=Sequence derived from alignment at H-paniculata_contig30608:433..639- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30608:433..639- >mRNA_H-paniculata_contig30608.8295.1 ID=mRNA_H-paniculata_contig30608.8295.1|Name=mRNA_H-paniculata_contig30608.8295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at H-paniculata_contig30608:433..639- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |