prot_H-paniculata_contig306.8290.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig306.8290.1
Unique Nameprot_H-paniculata_contig306.8290.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length629
Homology
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI)

HSP 1 Score: 518 bits (1333), Expect = 2.960e-169
Identity = 323/677 (47.71%), Postives = 383/677 (56.57%), Query Frame = 0
Query:    1 MGRFAEDAHTDLRQWHGECLDFRILRQSLIEDPPDPWDDHPSMAGPIPAASSIPSTVSSSGLATAAVTGGATSSPTDDSTGVRRRKSDSNLAQHWVPLLGGGIGSDGRGAGGDE----EAV--TEGGAAGDG---------------------------IFFSFSDPATRVFVFELHEALKRVWEFYREQTDVCGAKLSSLYDRSASSRHKLHRKLGGAPTGVAAPVADAGFGGDASPGGGGESCSTPSKSNFDLLGAVGRTEGFLNNSIAAAQELLLTGSPETTTXXS-KPRIRGRKSAISPPPTPRGSGGAG------DGASVGLEEANLLQ-----------------------------TTEDPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVREFAPFHEER 608
            MGRFA+++HTDLR W+ +CL+FR L++ LI+DPPDP+DDHPSM                                                          G  SD   AG D+    EA+   E G  GDG                           I  +F DPA+RVF+FE++E L+R+W FYR ++D C AKLS+L+D SAS RH+LHRKLGG   GV    + A   G +  G G E       +  D  G    T      S+    +L  + SP  +T    +P  +G           RGS G G       G SVG                                     TTEDPYVRASLKR I+ELYDTCHRLLSFKMLNYDA VRL+ELHCRR E  G           +P    WS         GVG+  GA   +G     EG   L +EK+MK+WLLE PLF++RDLN TL GAELLYASLFCNGDVDVART+LTFKASSS+RGNRRFDFGYRLG ATVLLAWA WD +AD SLGKD+W DPA++++RG GN++LL YMWGVNIWVWRRFGIDY+RCLSLDPKGPRVDPCEQVWN GCNLSIAFLVSFICFYK LRGVL+N   VP  FAHTFPLLL  Y+++ FL     P+HE +
Sbjct:    1 MGRFAQESHTDLRDWYVQCLNFRALKRRLIDDPPDPYDDHPSMXXXXXXXXXXXXXX------------------------XXXXXXXXXXXXXXXXXXAVGPRSDDLSAGLDDLEQQEALLKAERGGIGDGXXXXXXXXXXXXXXXXXXXXXXXXXXRISLAFPDPASRVFIFEINEELERMWAFYRNESDQCAAKLSALHDASASLRHQLHRKLGGMG-GVPEDFSSAAAAGGS--GVGYEGXXXXXXAVGDGPGGTAATTA----SLLDDPDLQYSSSPVVSTGGVLRPTPQGEDE------NGRGSSGWGMSSSAPSGPSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNATTEDPYVRASLKRAIVELYDTCHRLLSFKMLNYDAFVRLMELHCRRPEVAG-----------APPRPPWSAGK----MTGVGDHQGAK--AGGAVGGEGVGALSKEKAMKVWLLEQPLFSARDLNGTLAGAELLYASLFCNGDVDVARTALTFKASSSLRGNRRFDFGYRLGAATVLLAWAMWDCIADDSLGKDVWHDPAFKIYRGLGNLVLLVYMWGVNIWVWRRFGIDYERCLSLDPKGPRVDPCEQVWNAGCNLSIAFLVSFICFYKCLRGVLLNPTWVPIQFAHTFPLLLLFYMLLCFLT----PWHERK 619          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 6.110e-139
Identity = 225/334 (67.37%), Postives = 252/334 (75.45%), Query Frame = 0
Query:  275 GSGGAGDGASVGLEEANLLQTTEDPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVREFAPFHEER 608
            G  GAGD  S          TTEDPYVRASLKR I+ELYDTCHRLLSFKMLNYDA VRL+ELHCRR E  G           +P    WS          VG+  GA   +G     EG   L +EK+MK+WLLE PLF++RDLNSTL GAELLYASLFCNGDVDVART+LTFKASSS+RGNRRFDFGYRLG ATVLLAWA WD +AD SLGKD+W DPA++++RG GN++LL YMWGVNIWVWRRFGIDY+RCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYK LRGVL+N   VP  FAHTFPLLL  Y+++ FL     P+HE +
Sbjct:  221 GGAGAGDDESA---------TTEDPYVRASLKRAIVELYDTCHRLLSFKMLNYDAFVRLMELHCRRPEVAG-----------APPRPPWSAGK----MTVVGDHQGAK--AGGAVGGEGEGALSKEKAMKVWLLEQPLFSARDLNSTLAGAELLYASLFCNGDVDVARTALTFKASSSLRGNRRFDFGYRLGAATVLLAWAMWDCIADDSLGKDVWHDPAFKIYRGLGNLVLLVYMWGVNIWVWRRFGIDYERCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKCLRGVLLNPTWVPIQFAHTFPLLLLFYMLLCFLT----PWHERK 524          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A7S2SPW5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW5_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.770e-64
Identity = 124/307 (40.39%), Postives = 177/307 (57.65%), Query Frame = 0
Query:  298 DPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEG-LSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAEL-----------LYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYV 592
            DPYVR+ LK  +  L+    + ++F+M+N+  C +L+ LH    E +G  + P  G   A+P S +                                      K + ++++EH LF+ R+  +T G   L           LYA+LF +GD +VART+LT+ + + +     FDFG R+GV  VLLAW  WD L D  +GK++W DPA++V+RG GN++LL + WG+N++VWRR GIDY+R L L+P  P VDPC+ VW  GC+LSIAFL+S ICF+KALRGV +    VPP  AH FP+ LFLY+
Sbjct:   84 DPYVRSRLKASLAWLFQEHAQHVAFRMVNHSVCQKLILLHTELIEDKGNATAPGEGRAEAAPESPL-------------------------------------PKELALFVMEHELFSERESGTTEGKHHLAPRLQVDEILQLYAALFSHGDGEVARTALTYYSMNQVGNPHGFDFGLRIGVFLVLLAWVLWDCLVDDDMGKEVWNDPAFKVYRGLGNLVLLVWCWGINLFVWRRAGIDYERFLRLEPCPPGVDPCQSVWKEGCDLSIAFLLSLICFWKALRGVFLRG--VPPQLAHVFPVTLFLYI 351          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A7S2XUU5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 9.440e-57
Identity = 120/295 (40.68%), Postives = 163/295 (55.25%), Query Frame = 0
Query:  298 DPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYV 592
            DPY    +K  +++LY  C RL SFKM+N+D C RL+ LH +  E   +S     L +   A  ++S                 TP   +PAA++         +  + + E                E LYA+LFC G + VAR +L  KA+  +R  RR+D G R+GV  VLL WA WD + DP+LG D+W DPA++VFRG GN++LLT+ WGVN+WVW   GIDY R L +DP+      C +V+    NLS A+LV F+C+YKALRG   N   VPP  AH FP LL +Y+
Sbjct:    7 DPYEVHLIKTRLVDLYAKCMRLQSFKMINHDCCRRLIRLHAQETEPSNVSRVEKELTLVVLAQPLFS-----------------TP---APAALDKAG-----NASGVGVQE--------------ACEDLYAALFCAGQLVVARNALHHKANELLRPVRRWDQGVRVGVTGVLLLWAVWDCVVDPALGADVWHDPAFKVFRGLGNLVLLTWTWGVNLWVWSMAGIDYTRILEIDPRSSPDSLCFEVFREALNLSTAWLVCFLCYYKALRGCFTNH--VPPQLAHAFPFLLLIYI 260          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A7S2C320_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C320_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.550e-56
Identity = 120/315 (38.10%), Postives = 166/315 (52.70%), Query Frame = 0
Query:  298 DPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAE--LLYASLFCNGDVDVARTSLTFKASSSIRGN--RRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVREFAPFHEER 608
            DP++R  LK  + +L+    R + F+ML  + C RLV L  R    E + +   G                                                K +  +++ H +F      S+    E  +LYA+LFCNGD +VA+ +L F ++    G   RRF+FG RLG A VL+AW  WD + DP +GKD+W DPA++V+RG GN++LL + WGVN+WVWR  GIDY+R L LDP     DPC  VWN   +LSIAFL+S ICF+K+LRGV      +P   AHTFPL LFLY+    + R F P+ + +
Sbjct:  134 DPFLRTQLKDGLAQLFQEQSRQVIFRMLTNEVCERLVALQIRITCEEVIQLGTVG------------------------------------------------KELTSYIMGHAIFTELGPKSSKLAKETNVLYAALFCNGDTEVAQAALAFHSAEKNGGRSLRRFEFGIRLGAAMVLMAWVMWDLIVDPDMGKDVWHDPAFKVYRGLGNLVLLVWCWGVNLWVWRHVGIDYERFLELDPTQIGEDPCIPVWNEAIDLSIAFLLSLICFWKSLRGVFFQG--MPETLAHTFPLTLFLYI----MYRVFMPWKQRK 394          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A6H5K8A4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A4_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.700e-26
Identity = 64/145 (44.14%), Postives = 73/145 (50.34%), Query Frame = 0
Query:  477 WDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIW-----------------------------------------------VWRRFGIDYQRCLSLDPKGPRVDP--CEQVWNTGCNLSIAFLVSFICFYKALRGVLVN 572
            WDW+AD SLG D+W DPA +   G GN++LL YMWGVNIW                                               V RR  ++Y   L LDP+GPRV     E+VWNTGCNLSIAFLVSFI FYK LRG L N
Sbjct:    2 WDWIADDSLGHDVWHDPASKKHSGLGNLVLLVYMWGVNIWARGREIYMERNFETHGERXXXXXXXXXXXXXXXXXXXXXXXXDNETEVRRRVSVEYTGNLPLDPEGPRVCSLRAERVWNTGCNLSIAFLVSFIYFYKCLRGTLRN 146          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: D8LHD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD3_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 3.330e-16
Identity = 66/155 (42.58%), Postives = 85/155 (54.84%), Query Frame = 0
Query:  269 PPPTPRGSGGAGDG------ASVGLEEANLLQTTEDPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGT-SFLHREKSMKMWLLEHPLFASR 416
            P P+ +   G GDG        +G    +   TTEDPYV ASLKR I+ELYDTCHRLLSF+MLNYDA VR++EL    R      V  +G+  A P +   +   G +   G   G+ A          EG    L +EK+MK+WLLE PLF++R
Sbjct:  158 PGPSLQQRSGGGDGDVDGGMGLMGKTSGDESLTTEDPYVLASLKRAIVELYDTCHRLLSFEMLNYDAFVRMMELELHLR-----CVGAAGIVGAPPETETETAMVGRQDDRGS-VGVAAATAVVLETVTEGRPGALSKEKAMKVWLLEEPLFSAR 306          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A5D6YVA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YVA5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.530e-16
Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 0
Query:  415 SRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGK-------DLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHT--FPLLLFLYVIITFLVR 599
            +R   + L   E L+A+ FC+G+  VA  +L  K    +     +  G ++G   +LL W GWD L  P+          DL    AY V+RG G ++LL ++ GV+++VWR+  I+Y+    LDP+        QV++   N++I FL + + +YK + G        P    H   +PLLL  Y    ++VR
Sbjct:  200 ARPSRALLREVEELFAARFCDGNRAVALATLLTKREDVVNFAHMY-IGVKVGACLILLVWVGWDSLVVPTFRSERERHLLDLAATRAYPVYRGVGCLLLLHWLVGVSLFVWRKARINYRYIFELDPR--TTQQYTQVFSDATNMTIVFLANVLLYYKVVNGYF------PEALLHRGYYPLLLCAYTFYFYVVR 384          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A8K1FRU7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRU7_PYTOL)

HSP 1 Score: 93.2 bits (230), Expect = 4.670e-16
Identity = 66/212 (31.13%), Postives = 102/212 (48.11%), Query Frame = 0
Query:  398 HREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGK-------DLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDP-CEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHT--FPLLLFLYVIITFLVR 599
            HRE+     LLE    +++   + L   E ++A  FC G+  VA  SL  K    +     +  G ++G   VLL W  WD L  P+          DL    AY V+RG G  +LL ++ GV+++VWR   I+Y+    LDP   R  P   +V++   N++I +LV+ + +YK + G        P    H   +PL LF+Y    ++VR
Sbjct:  176 HRER-----LLEFDFASAKVCRAVLAEVEQMFADCFCEGNRTVAVASLMTKRQGFVHWGHIY-MGIKIGSCLVLLIWVVWDSLIVPTFRNEREKHLIDLAVTRAYPVYRGIGCCLLLHWLLGVSMYVWRSARINYRYIFELDP---RTTPHYTEVFSDATNMTIVYLVNVLMYYKVVNGYF------PEQLLHRGYYPLALFVYTFYYYIVR 372          
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: F0WM75_9STRA (Uncharacterized protein AlNc14C153G7578 n=2 Tax=Albugo TaxID=65356 RepID=F0WM75_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.920e-15
Identity = 60/210 (28.57%), Postives = 107/210 (50.95%), Query Frame = 0
Query:  399 REKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGK-------DLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHT--FPLLLFLYVIITFLVR 599
            RE+ ++ +L  +    +++    +   E  +A+ FC+G+  VA  +L  +  + I     +  G ++G   VLL W  WD +  PS          DL    AY V+RG G ++LL ++ GV+++VWR   I+Y+    ++P+  +      V+N   N++I FL++ + +YK      VN++  P    H   +PLLLF Y I  +++R
Sbjct:  178 REQHVQQYLQYYSFSNAQECQQLIAKLETFFANCFCDGNRQVAMATLMTRKEAFIHWGHIY-IGVKIGSCLVLLTWVVWDSIIVPSFPSGNERHVIDLALTRAYPVYRGIGCLLLLHWLIGVSMFVWRTARINYRYIFEINPR--KSQSYTHVFNEATNMTIVFLINVLLYYKV-----VNQNF-PERILHRGYYPLLLFGYTIYFYVIR 378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHJ2_ECTSI2.960e-16947.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJQ4_9PHAE6.110e-13967.37EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2SPW5_9STRA1.770e-6440.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XUU5_9STRA9.440e-5740.68Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S2C320_9STRA1.550e-5638.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5K8A4_9PHAE3.700e-2644.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD3_ECTSI3.330e-1642.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6YVA5_9STRA3.530e-1630.93Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1FRU7_PYTOL4.670e-1631.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WM75_9STRA1.920e-1528.57Uncharacterized protein AlNc14C153G7578 n=2 Tax=Al... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 495..614
e-value: 5.8E-11
score: 42.3
NoneNo IPR availablePANTHERPTHR10783XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATEDcoord: 136..597
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 478..496
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 544..566
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 497..517
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 518..543
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 578..598
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 567..577
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 599..628
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 461..477
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..460
NoneNo IPR availableTMHMMTMhelixcoord: 544..566
NoneNo IPR availableTMHMMTMhelixcoord: 576..598
NoneNo IPR availableTMHMMTMhelixcoord: 495..517
NoneNo IPR availableTMHMMTMhelixcoord: 461..480
IPR033507Syg1 familyPANTHERPTHR10783:SF4XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1coord: 136..597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig306contigH-paniculata_contig306:14756..25499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig306.8290.1mRNA_H-paniculata_contig306.8290.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig306 14533..25568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig306.8290.1 ID=prot_H-paniculata_contig306.8290.1|Name=mRNA_H-paniculata_contig306.8290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=629bp
MGRFAEDAHTDLRQWHGECLDFRILRQSLIEDPPDPWDDHPSMAGPIPAA
SSIPSTVSSSGLATAAVTGGATSSPTDDSTGVRRRKSDSNLAQHWVPLLG
GGIGSDGRGAGGDEEAVTEGGAAGDGIFFSFSDPATRVFVFELHEALKRV
WEFYREQTDVCGAKLSSLYDRSASSRHKLHRKLGGAPTGVAAPVADAGFG
GDASPGGGGESCSTPSKSNFDLLGAVGRTEGFLNNSIAAAQELLLTGSPE
TTTTTSKPRIRGRKSAISPPPTPRGSGGAGDGASVGLEEANLLQTTEDPY
VRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPR
SGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHRE
KSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKAS
SSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRG
TGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCN
LSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVRE
FAPFHEERYSCLAEEQYVMSTEIQTGCQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C
IPR033507Syg1