mRNA_H-paniculata_contig306.8290.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI) HSP 1 Score: 517 bits (1332), Expect = 1.050e-167 Identity = 323/677 (47.71%), Postives = 383/677 (56.57%), Query Frame = 1
Query: 70 MGRFAEDAHTDLRQWHGECLDFRILRQSLIEDPPDPWDDHPSMAGPIPAASSIPSTVSSSGLATAAVTGGATSSPTDDSTGVRRRKSDSNLAQHWVPLLGGGIGSDGRGAGGDE----EAV--TEGGAAGDG---------------------------IFFSFSDPATRVFVFELHEALKRVWEFYREQTDVCGAKLSSLYDRSASSRHKLHRKLGGAPTGVAAPVADAGFGGDASPGGGGESCSTPSKSNFDLLGAVGRTEGFLNNSIAAAQELLLTGSPETTTXXS-KPRIRGRKSAISPPPTPRGSGGAG------DGASVGLEEANLLQ-----------------------------TTEDPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVREFAPFHEER 1893
MGRFA+++HTDLR W+ +CL+FR L++ LI+DPPDP+DDHPSM G SD AG D+ EA+ E G GDG I +F DPA+RVF+FE++E L+R+W FYR ++D C AKLS+L+D SAS RH+LHRKLGG GV + A G + G G E + D G T S+ +L + SP +T +P +G RGS G G G SVG TTEDPYVRASLKR I+ELYDTCHRLLSFKMLNYDA VRL+ELHCRR E G +P WS GVG+ GA +G EG L +EK+MK+WLLE PLF++RDLN TL GAELLYASLFCNGDVDVART+LTFKASSS+RGNRRFDFGYRLG ATVLLAWA WD +AD SLGKD+W DPA++++RG GN++LL YMWGVNIWVWRRFGIDY+RCLSLDPKGPRVDPCEQVWN GCNLSIAFLVSFICFYK LRGVL+N VP FAHTFPLLL Y+++ FL P+HE +
Sbjct: 1 MGRFAQESHTDLRDWYVQCLNFRALKRRLIDDPPDPYDDHPSMXXXXXXXXXXXXXX------------------------XXXXXXXXXXXXXXXXXXAVGPRSDDLSAGLDDLEQQEALLKAERGGIGDGXXXXXXXXXXXXXXXXXXXXXXXXXXRISLAFPDPASRVFIFEINEELERMWAFYRNESDQCAAKLSALHDASASLRHQLHRKLGGMG-GVPEDFSSAAAAGGS--GVGYEGXXXXXXAVGDGPGGTAATTA----SLLDDPDLQYSSSPVVSTGGVLRPTPQGEDE------NGRGSSGWGMSSSAPSGPSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNATTEDPYVRASLKRAIVELYDTCHRLLSFKMLNYDAFVRLMELHCRRPEVAG-----------APPRPPWSAGK----MTGVGDHQGAK--AGGAVGGEGVGALSKEKAMKVWLLEQPLFSARDLNGTLAGAELLYASLFCNGDVDVARTALTFKASSSLRGNRRFDFGYRLGAATVLLAWAMWDCIADDSLGKDVWHDPAFKIYRGLGNLVLLVYMWGVNIWVWRRFGIDYERCLSLDPKGPRVDPCEQVWNAGCNLSIAFLVSFICFYKCLRGVLLNPTWVPIQFAHTFPLLLLFYMLLCFLT----PWHERK 619
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 1.250e-137 Identity = 225/334 (67.37%), Postives = 252/334 (75.45%), Query Frame = 1
Query: 892 GSGGAGDGASVGLEEANLLQTTEDPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVREFAPFHEER 1893
G GAGD S TTEDPYVRASLKR I+ELYDTCHRLLSFKMLNYDA VRL+ELHCRR E G +P WS VG+ GA +G EG L +EK+MK+WLLE PLF++RDLNSTL GAELLYASLFCNGDVDVART+LTFKASSS+RGNRRFDFGYRLG ATVLLAWA WD +AD SLGKD+W DPA++++RG GN++LL YMWGVNIWVWRRFGIDY+RCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYK LRGVL+N VP FAHTFPLLL Y+++ FL P+HE +
Sbjct: 221 GGAGAGDDESA---------TTEDPYVRASLKRAIVELYDTCHRLLSFKMLNYDAFVRLMELHCRRPEVAG-----------APPRPPWSAGK----MTVVGDHQGAK--AGGAVGGEGEGALSKEKAMKVWLLEQPLFSARDLNSTLAGAELLYASLFCNGDVDVARTALTFKASSSLRGNRRFDFGYRLGAATVLLAWAMWDCIADDSLGKDVWHDPAFKIYRGLGNLVLLVYMWGVNIWVWRRFGIDYERCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKCLRGVLLNPTWVPIQFAHTFPLLLLFYMLLCFLT----PWHERK 524
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A7S2SPW5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW5_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.190e-63 Identity = 124/307 (40.39%), Postives = 177/307 (57.65%), Query Frame = 1
Query: 961 DPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEG-LSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAEL-----------LYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYV 1845
DPYVR+ LK + L+ + ++F+M+N+ C +L+ LH E +G + P G A+P S + K + ++++EH LF+ R+ +T G L LYA+LF +GD +VART+LT+ + + + FDFG R+GV VLLAW WD L D +GK++W DPA++V+RG GN++LL + WG+N++VWRR GIDY+R L L+P P VDPC+ VW GC+LSIAFL+S ICF+KALRGV + VPP AH FP+ LFLY+
Sbjct: 84 DPYVRSRLKASLAWLFQEHAQHVAFRMVNHSVCQKLILLHTELIEDKGNATAPGEGRAEAAPESPL-------------------------------------PKELALFVMEHELFSERESGTTEGKHHLAPRLQVDEILQLYAALFSHGDGEVARTALTYYSMNQVGNPHGFDFGLRIGVFLVLLAWVLWDCLVDDDMGKEVWNDPAFKVYRGLGNLVLLVWCWGINLFVWRRAGIDYERFLRLEPCPPGVDPCQSVWKEGCDLSIAFLLSLICFWKALRGVFLRG--VPPQLAHVFPVTLFLYI 351
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A7S2XUU5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU5_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.940e-56 Identity = 120/295 (40.68%), Postives = 163/295 (55.25%), Query Frame = 1
Query: 961 DPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYV 1845
DPY +K +++LY C RL SFKM+N+D C RL+ LH + E +S L + A ++S TP +PAA++ + + + E E LYA+LFC G + VAR +L KA+ +R RR+D G R+GV VLL WA WD + DP+LG D+W DPA++VFRG GN++LLT+ WGVN+WVW GIDY R L +DP+ C +V+ NLS A+LV F+C+YKALRG N VPP AH FP LL +Y+
Sbjct: 7 DPYEVHLIKTRLVDLYAKCMRLQSFKMINHDCCRRLIRLHAQETEPSNVSRVEKELTLVVLAQPLFS-----------------TP---APAALDKAG-----NASGVGVQE--------------ACEDLYAALFCAGQLVVARNALHHKANELLRPVRRWDQGVRVGVTGVLLLWAVWDCVVDPALGADVWHDPAFKVFRGLGNLVLLTWTWGVNLWVWSMAGIDYTRILEIDPRSSPDSLCFEVFREALNLSTAWLVCFLCYYKALRGCFTNH--VPPQLAHAFPFLLLIYI 260
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A7S2C320_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C320_9STRA) HSP 1 Score: 213 bits (542), Expect = 8.270e-56 Identity = 120/315 (38.10%), Postives = 166/315 (52.70%), Query Frame = 1
Query: 961 DPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGTSFLHREKSMKMWLLEHPLFASRDLNSTLGGAE--LLYASLFCNGDVDVARTSLTFKASSSIRGN--RRFDFGYRLGVATVLLAWAGWDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHTFPLLLFLYVIITFLVREFAPFHEER 1893
DP++R LK + +L+ R + F+ML + C RLV L R E + + G K + +++ H +F S+ E +LYA+LFCNGD +VA+ +L F ++ G RRF+FG RLG A VL+AW WD + DP +GKD+W DPA++V+RG GN++LL + WGVN+WVWR GIDY+R L LDP DPC VWN +LSIAFL+S ICF+K+LRGV +P AHTFPL LFLY+ + R F P+ + +
Sbjct: 134 DPFLRTQLKDGLAQLFQEQSRQVIFRMLTNEVCERLVALQIRITCEEVIQLGTVG------------------------------------------------KELTSYIMGHAIFTELGPKSSKLAKETNVLYAALFCNGDTEVAQAALAFHSAEKNGGRSLRRFEFGIRLGAAMVLMAWVMWDLIVDPDMGKDVWHDPAFKVYRGLGNLVLLVWCWGVNLWVWRHVGIDYERFLELDPTQIGEDPCIPVWNEAIDLSIAFLLSLICFWKSLRGVFFQG--MPETLAHTFPLTLFLYI----MYRVFMPWKQRK 394
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A6H5K8A4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A4_9PHAE) HSP 1 Score: 114 bits (286), Expect = 4.780e-26 Identity = 64/145 (44.14%), Postives = 73/145 (50.34%), Query Frame = 1
Query: 1498 WDWLADPSLGKDLWTDPAYQVFRGTGNVILLTYMWGVNIW-----------------------------------------------VWRRFGIDYQRCLSLDPKGPRVDP--CEQVWNTGCNLSIAFLVSFICFYKALRGVLVN 1785
WDW+AD SLG D+W DPA + G GN++LL YMWGVNIW V RR ++Y L LDP+GPRV E+VWNTGCNLSIAFLVSFI FYK LRG L N
Sbjct: 2 WDWIADDSLGHDVWHDPASKKHSGLGNLVLLVYMWGVNIWARGREIYMERNFETHGERXXXXXXXXXXXXXXXXXXXXXXXXDNETEVRRRVSVEYTGNLPLDPEGPRVCSLRAERVWNTGCNLSIAFLVSFIYFYKCLRGTLRN 146
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: D8LHD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD3_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 4.160e-16 Identity = 66/155 (42.58%), Postives = 85/155 (54.84%), Query Frame = 1
Query: 874 PPPTPRGSGGAGDG------ASVGLEEANLLQTTEDPYVRASLKRCILELYDTCHRLLSFKMLNYDACVRLVELHCRRREAEGLSVPRSGLGMASPASAVWSINGGGEGANGVGEGLGATPGSGSPAAVEGT-SFLHREKSMKMWLLEHPLFASR 1317
P P+ + G GDG +G + TTEDPYV ASLKR I+ELYDTCHRLLSF+MLNYDA VR++EL R V +G+ A P + + G + G G+ A EG L +EK+MK+WLLE PLF++R
Sbjct: 158 PGPSLQQRSGGGDGDVDGGMGLMGKTSGDESLTTEDPYVLASLKRAIVELYDTCHRLLSFEMLNYDAFVRMMELELHLR-----CVGAAGIVGAPPETETETAMVGRQDDRGS-VGVAAATAVVLETVTEGRPGALSKEKAMKVWLLEEPLFSAR 306
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A5D6YVA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YVA5_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.910e-16 Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 1
Query: 1312 SRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGK-------DLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHT--FPLLLFLYVIITFLVR 1866
+R + L E L+A+ FC+G+ VA +L K + + G ++G +LL W GWD L P+ DL AY V+RG G ++LL ++ GV+++VWR+ I+Y+ LDP+ QV++ N++I FL + + +YK + G P H +PLLL Y ++VR
Sbjct: 200 ARPSRALLREVEELFAARFCDGNRAVALATLLTKREDVVNFAHMY-IGVKVGACLILLVWVGWDSLVVPTFRSERERHLLDLAATRAYPVYRGVGCLLLLHWLVGVSLFVWRKARINYRYIFELDPR--TTQQYTQVFSDATNMTIVFLANVLLYYKVVNGYF------PEALLHRGYYPLLLCAYTFYFYVVR 384
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: A0A8K1FRU7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRU7_PYTOL) HSP 1 Score: 93.2 bits (230), Expect = 6.480e-16 Identity = 66/212 (31.13%), Postives = 102/212 (48.11%), Query Frame = 1
Query: 1261 HREKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGK-------DLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDP-CEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHT--FPLLLFLYVIITFLVR 1866
HRE+ LLE +++ + L E ++A FC G+ VA SL K + + G ++G VLL W WD L P+ DL AY V+RG G +LL ++ GV+++VWR I+Y+ LDP R P +V++ N++I +LV+ + +YK + G P H +PL LF+Y ++VR
Sbjct: 176 HRER-----LLEFDFASAKVCRAVLAEVEQMFADCFCEGNRTVAVASLMTKRQGFVHWGHIY-MGIKIGSCLVLLIWVVWDSLIVPTFRNEREKHLIDLAVTRAYPVYRGIGCCLLLHWLLGVSMYVWRSARINYRYIFELDP---RTTPHYTEVFSDATNMTIVYLVNVLMYYKVVNGYF------PEQLLHRGYYPLALFVYTFYYYIVR 372
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Match: F0WM75_9STRA (Uncharacterized protein AlNc14C153G7578 n=2 Tax=Albugo TaxID=65356 RepID=F0WM75_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.650e-15 Identity = 60/210 (28.57%), Postives = 107/210 (50.95%), Query Frame = 1
Query: 1264 REKSMKMWLLEHPLFASRDLNSTLGGAELLYASLFCNGDVDVARTSLTFKASSSIRGNRRFDFGYRLGVATVLLAWAGWDWLADPSLGK-------DLWTDPAYQVFRGTGNVILLTYMWGVNIWVWRRFGIDYQRCLSLDPKGPRVDPCEQVWNTGCNLSIAFLVSFICFYKALRGVLVNEDVVPPVFAHT--FPLLLFLYVIITFLVR 1866
RE+ ++ +L + +++ + E +A+ FC+G+ VA +L + + I + G ++G VLL W WD + PS DL AY V+RG G ++LL ++ GV+++VWR I+Y+ ++P+ + V+N N++I FL++ + +YK VN++ P H +PLLLF Y I +++R
Sbjct: 178 REQHVQQYLQYYSFSNAQECQQLIAKLETFFANCFCDGNRQVAMATLMTRKEAFIHWGHIY-IGVKIGSCLVLLTWVVWDSIIVPSFPSGNERHVIDLALTRAYPVYRGIGCLLLLHWLIGVSMFVWRTARINYRYIFEINPR--KSQSYTHVFNEATNMTIVFLINVLLYYKV-----VNQNF-PERILHRGYYPLLLFGYTIYFYVIR 378 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig306.8290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig306.8290.1 >prot_H-paniculata_contig306.8290.1 ID=prot_H-paniculata_contig306.8290.1|Name=mRNA_H-paniculata_contig306.8290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=629bp MGRFAEDAHTDLRQWHGECLDFRILRQSLIEDPPDPWDDHPSMAGPIPAAback to top mRNA from alignment at H-paniculata_contig306:14533..25568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig306.8290.1 ID=mRNA_H-paniculata_contig306.8290.1|Name=mRNA_H-paniculata_contig306.8290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11036bp|location=Sequence derived from alignment at H-paniculata_contig306:14533..25568- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig306:14533..25568- >mRNA_H-paniculata_contig306.8290.1 ID=mRNA_H-paniculata_contig306.8290.1|Name=mRNA_H-paniculata_contig306.8290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3774bp|location=Sequence derived from alignment at H-paniculata_contig306:14533..25568- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |