mRNA_H-paniculata_contig3058.8283.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI) HSP 1 Score: 382 bits (982), Expect = 6.160e-127 Identity = 185/296 (62.50%), Postives = 234/296 (79.05%), Query Frame = 3
Query: 309 EKWDSWEFGSFKRNSYEELSLEKTLRDQPPVRLPSVMGGGTELLNEVLGAKTTSTDLEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKARRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSVPTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRALKHGDLTEDERRRITAGWLMQCVRGSDGILRRYGIAVPPDAIPNER-----VAGFSVR 1181
++WD+WEFG++K ++ E E R P ++ + +G T L + T++DLE+A+D+LK YL+EDR ++M +VL QRT S +VFENP+NPNNVWACLRTLDSFG+Q+AH+VSDP TY+K+AR +TMC+AMGSQKWLTLHGH+ PE+AVAKLK DGY+VVASDLSPSAVPI +I+WSVPTA+VLGNEERGIS SMR +AD TF IPMRGF +SFNMSVACS+ILAHLSA+RALKHGDL EDERR + WLMQCVRGS+ IL+R GI +P + ++ +AG+ VR
Sbjct: 75 DEWDTWEFGTWKTRTHSENVAEAAARAAGPAKVSTFIG--TRALVD-----QTASDLERAVDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQEIFGTDKQRPQNIAGYRVR 363
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A836C8H0_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H0_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.880e-74 Identity = 123/253 (48.62%), Postives = 169/253 (66.80%), Query Frame = 3
Query: 429 TELLNEVLGAKTTSTDLEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKARRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSVP-TAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRALKHGDLTEDERRRITAGWLMQCVRGSDGILRRYGIAVPPDAI---PNERVAGFS 1175
T+LL E+ A ++E+AI+ L+ + +R ++ +VL +RT VFENPSNPNNVWA LRT+DSFG+QN HV++DP Y KK R TM SAMGSQKWL+LHGH++ + LKA GYR++ S L P AVP+D I+WS A+ GNE+ G+S+ + + D+TF IPMRGFA+SFN+SVA S++LA +A L+ GDL E ERR + WL++ V + +L+R GIA+P E +AGFS
Sbjct: 7 TQLLAEMPVA-----EMERAIEALERFTQPERLGRLQDVLNKRTAHLCTVFENPSNPNNVWAALRTIDSFGIQNVHVIADPELYIKKGRLLTMSSAMGSQKWLSLHGHDSAADCARALKARGYRIIGSSLGPGAVPMDAIDWSARRVAVAFGNEKTGLSEGLLAQCDQTFYIPMRGFAESFNVSVALSIVLASAAAGGGLRGGDLGEGERRAVYLRWLLRTVAAGESVLQREGIALPQSMSLRRTEEGIAGFS 254
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC) HSP 1 Score: 214 bits (544), Expect = 9.420e-62 Identity = 111/242 (45.87%), Postives = 153/242 (63.22%), Query Frame = 3
Query: 420 GGGTELLNEVLGA--KTTSTDLEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKAR-RQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSVPTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRALKHGDLTEDERRRITAGWLMQCVRGSDGILRRYGIAVP 1136
GG +E+ N + + D E A++ L ++ DR ++ V++QRT VFE P+NPNNVWACLRTLDSFG+Q+ V+ P Y ++ M A+GS +WL++ ++ EA+ +LK G RV ASDL + + ++ S P IVLGNE GIS+ MR LADETF +PMRGFA+SFN+SVAC+V A+LS + LK GDL+E ER + WLM+CV GS +L R G+ VP
Sbjct: 67 GGSSEVDNVAVSMHDEPQGFDYESAVEALSPLVSPDRLERLQTVISQRTNHCQFVFEAPTNPNNVWACLRTLDSFGIQHTSVIRRPGGYDRQRDINGNMNVALGSSQWLSMQEFQSASEAIGQLKDRGVRVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRVP 308
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA) HSP 1 Score: 207 bits (526), Expect = 4.480e-60 Identity = 109/234 (46.58%), Postives = 149/234 (63.68%), Query Frame = 3
Query: 474 DLEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKARRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSP--SAVPIDQINWSVP-TAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRALKHGDLTEDERRRITAGWLMQCVRGSDGILRRYGIAVPPDAI-PNERV 1163
D+ A + L + T R ++ +++ +RT S VFEN +NPNN+WACLR+LD+FGVQ AHV+ D Y K R SAMGSQKWLT+ H + VA LK +GY V+ASDL P S P+ ++ W+ AIV+GNEERGI++ MRSL D TF IPM GFA+SFN+S + +V LA +S++ LKHGDL E+ + WL++ V ILRR G+ + + I P +V
Sbjct: 13 DVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERILPTSKV 246
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA) HSP 1 Score: 209 bits (532), Expect = 3.290e-59 Identity = 111/240 (46.25%), Postives = 154/240 (64.17%), Query Frame = 3
Query: 474 DLEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKARRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSP--SAVPIDQINWSVP-TAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRALKHGDLTEDERRRITAGWLMQCVRGSDGILRRYGIAVPPDA-IPNER-VAGFSV 1178
D+ A + L + T R ++ +++ +RT S VFEN +NPNN+WACLR+LD+FGVQ AHV+ D Y K R SAMGSQKWLT+ H + VA LK +GY V+ASDL P S P+ ++NW+ AIV+GNEERGI++ MRSL D TF IPM GFA+SFN+S + +V LA +S++ LKHGDL E+ + WL++ V ILRR G+ + + +P + V G+S+
Sbjct: 154 DVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERFLPTSKAVLGYSL 393
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV) HSP 1 Score: 199 bits (507), Expect = 2.140e-55 Identity = 102/201 (50.75%), Postives = 140/201 (69.65%), Query Frame = 3
Query: 477 LEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKA---RRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSV-PTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIR-----ALKHGDLTEDE 1052
+ +A DIL+ ++ +DR ++ VL QRT T +FENPSNP+NVWACLRT+DSFGVQN +V D Y K +++ M +AMGS KWL+L H + EEAV +KA+GY++ ASDL+P++ + +++W V P +V+GNEERGIS MR +AD TF +PM GFA+SFN+SVA S+ LAH+SA AL+ GDL E
Sbjct: 172 VSRATDILRPFVGDDRYERIDSVLRQRTKRTKFLFENPSNPSNVWACLRTIDSFGVQNVDLVVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSAKSKDGRGALRPGDLDPHE 372
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A7S1Y6X6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X6_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.970e-54 Identity = 106/235 (45.11%), Postives = 151/235 (64.26%), Query Frame = 3
Query: 483 QAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKK---ARRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSV----PTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRA-------LKHGDLTEDERRRITAGWLMQCV---RGSDGILRRYGIAVP 1136
+A + L+ ++ EDR +M VL QRT + +FENPSNP+NVWACLRT+DSFGVQ+ +V Y K A++ + +AMGS +WL+L H T AVAKLK++GY++ ASDL+P++ + ++WS P IV+GNE RGISQ MR LADETF +PM GFA+SFN+SVA ++ LAHLSA L+ GD+ E E R+ ++ + R + +L+R + +P
Sbjct: 140 RATETLRPFIREDRAERMESVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQDVDLVVQSGQYEGKGAIAQKSGLRTAMGSAQWLSLTNHPTTASAVAKLKSEGYKLYASDLNPNSKDVRDVDWSADGDRPICIVMGNEGRGISQEMRELADETFTLPMCGFAESFNLSVATAITLAHLSAKSGHENQEGPLRPGDMDEHEYNRLLLKGIIFSLPQRRTARALLKRNNVVLP 374
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A7S0Y847_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y847_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.230e-53 Identity = 103/242 (42.56%), Postives = 155/242 (64.05%), Query Frame = 3
Query: 477 LEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKK---ARRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSV---PTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIR-------------ALKHGDLTEDERRRITAGWLMQCV---RGSDGILRRYGIAVP 1136
+ +AI+ L+ ++ DR +++ VL QRT + +FENPSNP+NVWACLRT+DSFG+QN V+ D Y K ++++ M +AMGS +WLTL H T +EA+ +++ G+++ ASDL+P++ + I+W P IV+GNE+RGISQ MR +ADETF +PM GFA+SFN+SVA S+ LAH+SA L+ GDL+E E + L+ + R S +L++ G+ +P
Sbjct: 136 IAKAIETLEPWINGDRLERVSGVLKQRTKHSKFLFENPSNPSNVWACLRTIDSFGMQNVDVIIDSGRYAGKQAISQKKGMRTAMGSAQWLTLTNHHTTKEAIDQIRDQGFKIYASDLNPNSKDVRDIDWDADDRPICIVMGNEDRGISQEMREMADETFTLPMSGFAESFNLSVATSITLAHMSAKSYNCQKDPDGKRKGPLRPGDLSEHEYNCLYLKGLLHSLPQKRMSKALLKKAGVELP 377
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A7S3PUK7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUK7_9STRA) HSP 1 Score: 188 bits (477), Expect = 2.840e-51 Identity = 102/236 (43.22%), Postives = 148/236 (62.71%), Query Frame = 3
Query: 477 LEQAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKA---RRQTMCSAMGSQKWLTLHGHETPEEAVAKLKADGYRVVASDLSPSAVPIDQINWSV-PTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIR-----ALKHGDLTEDERRRITAGWLMQCV---RGSDGILRRYGIAVPPDAI 1148
+ A +L+ ++ EDR K+A VL QRT + +FENPSNP+NVWACLRT+DSFGVQN + D Y K +++ M +AMGS +WL+L H + EA+ ++K GY++ A+DL+ ++ + ++W P +V+GNEERGISQ MR ADETF +PM GFA+SFN+SVA S+ LAH+SA L+ GDL E E + L+ + R +L++ I +P A+
Sbjct: 148 VNSARGVLEPWINEDRLQKVARVLKQRTKRSKFLFENPSNPSNVWACLRTIDSFGVQNVDCIIDSGMYAGKQAIHQKKGMRTAMGSAQWLSLKNHLSTAEAIKEIKNQGYKIYATDLNSNSKDVRDLDWETSPICVVMGNEERGISQEMRDAADETFILPMCGFAESFNLSVATSITLAHMSAQSFGENGPLRKGDLDEHEYNCLYLKGLLNSLPQKRTGKLLLKQNNIIIPDRAL 383
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Match: A0A7S4VNE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VNE4_9STRA) HSP 1 Score: 186 bits (473), Expect = 8.660e-51 Identity = 104/242 (42.98%), Postives = 153/242 (63.22%), Query Frame = 3
Query: 483 QAIDILKSYLTEDRTAKMAEVLAQRTGSTAVVFENPSNPNNVWACLRTLDSFGVQNAHVVSDPRTYTKKA---RRQTMCSAMGSQKWLTLHGHETPEEAVAKLKAD-GYRVVASDLSPSAVPIDQINWSV-PTAIVLGNEERGISQSMRSLADETFAIPMRGFAQSFNMSVACSVILAHLSAIRA--------------LKHGDLTEDERRRITAGWLMQCV---RGSDGILRRYGIAVPPD 1142
+A IL+ Y+ DR ++ VL QRT + +FENPSNP+NVWACLRT+DSFGVQN +V + Y KA +++ M +AMGS +WL+L + T +AV +++ + GY++ ASDL+P++ + ++W V P +V+GNE+RGIS+ MR+LADETF +PM GFA+SFN+SVA +V LAH+SA L+ GDL E E + L+ + R +L++ GI +P D
Sbjct: 132 EASAILEPYINADRLERIDSVLKQRTKNCRFLFENPSNPSNVWACLRTIDSFGVQNVDLVINSGLYEGKAAISQKRGMRTAMGSAQWLSLRNYMTTADAVREIREEKGYKIYASDLNPNSKDVRDLDWDVGPICVVMGNEDRGISEEMRNLADETFTLPMVGFAESFNLSVATAVTLAHMSASSRQKEVEGGETIVTGPLRPGDLDEHEFNCLRLKGLLNSLPQRRTGPALLKQKGIVLPDD 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3058.8283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3058.8283.1 >prot_H-paniculata_contig3058.8283.1 ID=prot_H-paniculata_contig3058.8283.1|Name=mRNA_H-paniculata_contig3058.8283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=391bp MLLLCCCGIRIVQSVVDEGAMVAKATTLGLAVTSVTSGIVRCYGFLQPMVback to top mRNA from alignment at H-paniculata_contig3058:606..4295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3058.8283.1 ID=mRNA_H-paniculata_contig3058.8283.1|Name=mRNA_H-paniculata_contig3058.8283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3690bp|location=Sequence derived from alignment at H-paniculata_contig3058:606..4295+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3058:606..4295+ >mRNA_H-paniculata_contig3058.8283.1 ID=mRNA_H-paniculata_contig3058.8283.1|Name=mRNA_H-paniculata_contig3058.8283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at H-paniculata_contig3058:606..4295+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |