mRNA_H-paniculata_contig30537.8271.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A6H5JR77_9PHAE (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR77_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.500e-29 Identity = 63/120 (52.50%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDAC----GVSAPV------GFGVVSFTELNSPGFPAFPVLHRNHLAIFPEVFPEAFINQDADPWIFQ 330
G C + LAQ AF QGA YTVL GDDVRL+S W +I+D F+ + R G+ P GFGVV FT+ SPGFP FPVLHR H IFPE+FP F+NQDADPWIF+
Sbjct: 102 GQVCRVWRKLAQEAFRQGAEYTVLLGDDVRLLSPGWMGQIQDEFKLLQRELSSQTSVATEGLGRPFVDVLPHGFGVVCFTDKLSPGFPGFPVLHRTHGEIFPEIFPVKFVNQDADPWIFE 221
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A5N5QIV0_9AGAM (Uncharacterized protein n=1 Tax=Ceratobasidium theobromae TaxID=1582974 RepID=A0A5N5QIV0_9AGAM) HSP 1 Score: 102 bits (254), Expect = 4.530e-23 Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFP-EVFPEAFINQDADPWIFQ 330
G CA+ A+ AF+ Y VL GDD+ L+ E W I FQ + R + P GFG V+FT+L PG P FPV+HR H+ IF EV PEAFINQD DP++FQ
Sbjct: 469 GKVCALWRDAARGAFKNNCDYYVLMGDDIELLDEGWMRTIHSKFQQVSRES-------GGPNGFGCVAFTDLTFPGMPTFPVIHRTHMTIFDGEVIPEAFINQDGDPYLFQ 572
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A7S2W5J2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W5J2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.840e-22 Identity = 56/116 (48.28%), Postives = 68/116 (58.62%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFPE------VFPEAFINQDADPWIFQ 330
G C +L AFE G + VLFGDDV L SE W E+I F+ I R C V P GFGVVSF +L P FP FPVL ++H IF + +FP AFINQDADP+++Q
Sbjct: 97 GSVCHYWNILGCKAFENGCDFVVLFGDDVVLKSENWLEKIIQGFKEIERR-----CKV--PFGFGVVSFNDLTHPYFPTFPVLGKHHYKIFGDRKNSQGLFPSAFINQDADPYLWQ 205
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A8H6S5P1_9AGAR (Uncharacterized protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6S5P1_9AGAR) HSP 1 Score: 94.7 bits (234), Expect = 2.270e-20 Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFP-EVFPEAFINQDADPWIFQ 330
G CA+ A+ A++ G Y LFGDDV L+ + W I FQ I + + P GFG V+F++++ PG P FPV+HR+H+ +F V P+AFINQD DP++FQ
Sbjct: 463 GHVCALWRDCARTAWKDGCDYMALFGDDVELLDDGWLRGIHQEFQVISSVS-------NYPSGFGCVAFSDISFPGMPTFPVIHRSHMNMFSGNVIPDAFINQDGDPFLFQ 566
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A482SIS9_9ARCH (Glycosyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIS9_9ARCH) HSP 1 Score: 92.0 bits (227), Expect = 1.940e-19 Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query: 10 CAMCGVLAQLAFEQGARYTVLFGDDVRLVSEK---------WTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFPEVFPEAFINQDADPWIFQ 330
C + LA A +QG Y VL GDDV + + W + I +AF +H+ P S P GFG V+ ++N+P FP FPVL + H+ IFP++FP+ F+NQDADP++F+
Sbjct: 103 CDIWRSLAMEAVDQGCFYLVLLGDDVNISVAQVSPPAPHTHWVDSIENAFHDLHKK-FP-----SLPFGFGCVALKDVNAPSFPTFPVLTKVHVRIFPDLFPKVFVNQDADPFVFE 212
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A8H4VI74_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VI74_9AGAR) HSP 1 Score: 91.3 bits (225), Expect = 3.720e-19 Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFP-EVFPEAFINQDADPWIFQ 330
G C + A+ A+ G Y VL GDDV L W + + + F + R P+GFG V+FT+ + PG P FPV+HR H+ IF +V P+AFINQD DP++FQ
Sbjct: 469 GHVCKIWQDCARKAWTDGCDYMVLMGDDVTLEDAGWLKAVHEEFNEVSRQN-------KTPLGFGCVAFTDTSFPGMPTFPVIHRTHMDIFNGDVVPDAFINQDGDPYLFQ 572
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: S8EIK6_FOMPI (Uncharacterized protein n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8EIK6_FOMPI) HSP 1 Score: 89.0 bits (219), Expect = 2.400e-18 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFP-EVFPEAFINQDADPWIFQ 330
G CA+ A+ A+E GA + L GDDV L+ W + AF+ + T P GFG ++FT+ + PG P FPV+HR H+ IF +V P F+NQD DP++FQ
Sbjct: 456 GHVCALWRDCARAAWEDGADFMTLMGDDVILLDPSWMSTVVRAFEELSVTE-------GVPPGFGCIAFTDTSFPGMPTFPVIHRTHMDIFGGQVIPGFFVNQDGDPFLFQ 559
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: UPI0004449523 (glycosyltransferase family 2 protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449523) HSP 1 Score: 84.3 bits (207), Expect = 1.000e-16 Identity = 46/111 (41.44%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFP-EVFPEAFINQDADPWIFQ 330
G C++ A+ AF Y VL GDDV L + W I F + A S P GFG VS T+ + PG P FP +HR H+ IF + PEAF+NQD DP++FQ
Sbjct: 466 GHVCSLWRECARRAFADHCDYYVLMGDDVALDDDGWMTAIVAEFSKM-------ASKESVPEGFGCVSLTDTSFPGMPTFPTVHRTHMEIFDGTIVPEAFVNQDGDPFLFQ 569
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A371DK95_9APHY (NAD-dependent epimerase/dehydratase n=2 Tax=Polyporus TaxID=5637 RepID=A0A371DK95_9APHY) HSP 1 Score: 83.6 bits (205), Expect = 1.870e-16 Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPVGFGVVSFTELNSPGFPAFPVLHRNHLAIFP-EVFPEAFINQDADPWIFQ 330
G CA+ A+ A+E Y VL GDDV L W I F + ++ D + P G G V+FT+++ PG P FPV+HR HL IF EV P+AF NQD DP+++Q
Sbjct: 451 GHVCALWRDAARRAYEDKCDYYVLMGDDVVLQDANWMSCIHRTFTEL---SVQDH-DLRLPHGVGCVAFTDMSFPGMPTFPVVHRTHLDIFHGEVVPDAFTNQDGDPFLYQ 557
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Match: A0A7S0R1R1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0R1R1_9CRYP) HSP 1 Score: 81.6 bits (200), Expect = 3.700e-16 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 GDRCAMCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDACGVSAPV---GFGVVSFTELNSPGFPAFPVLHRNHLAIFPEVFPEAFINQDADPWIFQ 330
G C ++A A G+ + V+ GDDV++V W + F +H+ + P GFG ++ ++L + GFP FP+LH+ HL + E+F F+NQDADP++FQ
Sbjct: 74 GQICTYWKLMANQAVSAGSDFFVMLGDDVKIVDIDWIPAVMRDFDRMHKE-------LQLPADLFGFGCIALSDLQATGFPTFPILHKIHLKLLGELFSPLFVNQDADPFLFQ 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30537.8271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30537.8271.1 >prot_H-paniculata_contig30537.8271.1 ID=prot_H-paniculata_contig30537.8271.1|Name=mRNA_H-paniculata_contig30537.8271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp MCGVLAQLAFEQGARYTVLFGDDVRLVSEKWTEEIRDAFQSIHRTAIPDAback to top mRNA from alignment at H-paniculata_contig30537:394..1295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30537.8271.1 ID=mRNA_H-paniculata_contig30537.8271.1|Name=mRNA_H-paniculata_contig30537.8271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=902bp|location=Sequence derived from alignment at H-paniculata_contig30537:394..1295+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30537:394..1295+ >mRNA_H-paniculata_contig30537.8271.1 ID=mRNA_H-paniculata_contig30537.8271.1|Name=mRNA_H-paniculata_contig30537.8271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at H-paniculata_contig30537:394..1295+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |