mRNA_H-paniculata_contig305.8261.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: D7FJ18_ECTSI (CCR4-NOT transcription complex subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ18_ECTSI) HSP 1 Score: 761 bits (1966), Expect = 1.830e-272 Identity = 387/422 (91.71%), Postives = 398/422 (94.31%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEEVGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAPIQPLTLDEMRLGEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
MLD+QELTPLLQLLNDEDDILENVAQKF R FTRNDHFKVGCALC+LLCDNLLT TQRVVSFSILCDLYRN+ANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYE TPAEAVEVPDLSALRQLYSEKNPAVP+L R AGVRPVL DPS EVG WLPPRPE+Q GRA GG ALRGG+ GG+RE PIQPLTLD+MRL +GG GGSLSLASFEPEFMRPVPPMLPIADSEV+WLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLP QQQQVL+ELQ DARLVYHCGLTP KLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE
Sbjct: 1 MLDSQELTPLLQLLNDEDDILENVAQKFHRTFTRNDHFKVGCALCILLCDNLLTHTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVEVPDLSALRQLYSEKNPAVPSL-RTAGVRPVLADPSESSNEVGSWLPPRPEEQVGRAPGGAALRGGV-GGKREAPTPIQPLTLDDMRLSKGGRGGSLSLASFEPEFMRPVPPMLPIADSEVMWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPTQQQQVLSELQGDARLVYHCGLTPFKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 420
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: A0A2D4BNE6_PYTIN (CCR4-NOT transcription complex subunit 11 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE6_PYTIN) HSP 1 Score: 483 bits (1244), Expect = 4.270e-163 Identity = 263/436 (60.32%), Postives = 322/436 (73.85%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVP--DLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEE-----VGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAPIQPLTLDEMRLGEGGDG-------GSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+A+EL PLL +LN++D LE V+ F R FT+NDHFKVGC +C+LL DNLLT +QR+V FSILCDLYRNEA TNPFLP FLEA+EKGTDP E ++LVHLL S P+NR +++++A +++E A + ++P DL ALR++Y EK P VP L R AG+R V+ D ++ +E + +PP V + P A + LT++EM L G GSLSL FEP+FMR PP++ +E+IWLNPDY P LLWD +M +DSS G E+R++MA AF GP +P+QQQ+VL +L+ D +LVYHC LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLEARELRPLLTILNEDDKPLEQVSSAFSRTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILCDLYRNEAASTNPFLPVFLEALEKGTDPCETKFLVHLLSSTPSNRETSKRSAKTILSELR---ANSSQIPPFDLEALRKVYKEKTPPVPQL-RGAGIRNVVTDSELDLQEHLNTSANVHVPPNE----------VCML-------NVPCA--EELTIEEMGLSLDAAGAAGAPSAGSLSLQGFEPKFMRLPPPIMEPDMTELIWLNPDYCPTLLWDGTMFEDSSHGMELRELMAXAFVGPXIPSQQQKVLADLEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 413
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: A0A8K1CP59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP59_PYTOL) HSP 1 Score: 476 bits (1225), Expect = 2.560e-160 Identity = 253/428 (59.11%), Postives = 314/428 (73.36%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEE-----VGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAPIQPLTLDEMRL-GEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+ +EL PLL +LN+++ LE V F R FT+NDHFKVGC +C+LL DNLLT +QR+V SIL DLYR+E GTNPFLP F E +EKG+D E+++++HLL +P NR S++K A ++AE+ + +V D+ AL+ Y E+ PAVP RAAG+R V+ D ++ +E + +PP AL + L+++EM L GE G SLSL SFEP FMR PP++ +E+IWLNPDY P +LWD++M +DSS G E+R++MAKAF GPL+P+QQQ+VL EL+ D +LVYHC LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLETRELRPLLAILNEDEKPLEQVGSSFARTFTKNDHFKVGCTICILLQDNLLTSSQRIVGLSILSDLYRSENTGTNPFLPVFFEVLEKGSDLSEKRFVLHLLSTPSANRESSKKGAKTLLAEFRANASPVAQV-DIDALKNAYKERTPAVPQF-RAAGMRNVVTDTELDLQEQLNNGANVHIPPNEVS---------ALN----------VPSFEELSIEEMGLTGENGAPASLSLLSFEPSFMRLPPPIMEPEMTELIWLNPDYCPTVLWDSTMFEDSSHGLELRELMAKAFVGPLIPSQQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 407
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: K3XBZ3_GLOUD (CCR4-NOT transcription complex subunit 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBZ3_GLOUD) HSP 1 Score: 453 bits (1165), Expect = 2.690e-151 Identity = 252/437 (57.67%), Postives = 311/437 (71.17%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVP---DLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEEVGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAP-----------IQPLTLDEMRL-GEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+ +EL PLL +LN++D LE V F + +T+NDHFKVGC +C+LL DNLLT +QRVV FSIL DLYRNE+ GTNPFLP FLEA+EKG+D E+++LV LL + P+ ++ +K A VI E ++P VP D+ R+ Y+EK PAVP RAAGVR V+ D ++ +E L G + P P + L+L+EM L EG G LSL SFEP+FMR PP+L +E+IWLNPDY P +LW+++M DSS G E+R++M KAF+ PL+P+ Q +VL+EL+ + +LVY C LTP +LPDLVENNPMIAI+CLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLETRELRPLLSILNEDDKPLETVMSSFLKTYTKNDHFKVGCTICILLQDNLLTSSQRVVGFSILSDLYRNESAGTNPFLPVFLEALEKGSDISEKKFLVLLLSAAPSTKDMNKKTAKAVITELRQSP-----VPLQFDIEGFRKAYAEKTPAVPQF-RAAGVRNVVTDTELDLQE--------------------HLNNGAS-----PHVPPNEVSSLNLPCFEALSLEEMSLISEGDASGPLSLLSFEPKFMRLPPPILEPDMTELIWLNPDYCPTMLWNSTM-LDSSHGMEIRELMLKAFQTPLIPSLQAKVLDELEVNPKLVYQCSLTPQRLPDLVENNPMIAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 405
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: H3H0V6_PHYRM (CCR4-NOT transcription complex subunit 11 n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3H0V6_PHYRM) HSP 1 Score: 450 bits (1157), Expect = 8.540e-150 Identity = 248/447 (55.48%), Postives = 309/447 (69.13%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEE-----VGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAPIQPLTLDEMRLGEGGDG--------------------GSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+ +EL PLL +LN++D LE VA F FT+NDHFKVGC +C+LL DNLLT +QR+V FSIL DLYRNE TNPFLP FL+A+EKG+D E++ +VHLL + R+S++K A Q++AE+ P++ V+ D+ A+R Y E+ P+VP RAAG+R V+ D + +E L +PP + L+L+EM L + GSLSL SFEP FMR PP+L +E+IWLNPDY P LLWD++M DS+ G +R++M +AF+ PL+P+ QQ+VL EL+ D +LVYHC LTP +LPDLVENNPM+AI+CLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLEIRELRPLLAILNEDDKPLEQVASMFLHTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILSDLYRNEGTTTNPFLPVFLDALEKGSDLCEKKLIVHLLTATGATRDSSKKAAKQLMAEFRANPSQPVQF-DVEAMRNSYLERTPSVPQF-RAAGIRNVVTDTEFDLQEHVNNGANLQVPPNEVSSLNLPC-------------------FEALSLEEMSLLSDAEASXXXXXXXXXXXXXXXXXXAGSLSLLSFEPTFMRLPPPILEPDMTELIWLNPDYCPTLLWDSTM-LDSTHGIALRELMLRAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 425
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: A0A484EAT0_BRELC (CCR4-NOT transcription complex subunit 11 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAT0_BRELC) HSP 1 Score: 441 bits (1133), Expect = 3.290e-146 Identity = 248/446 (55.61%), Postives = 307/446 (68.83%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEE-----VGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAPI-QPLTLDEMRL------GEGGDG------------GSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+ +EL PLL +LN++D LE V F R FT+NDHFKVGC +C+LL DNLLT +QR+VSFSILCDLYR+E TNPFL F++A+EKG+D E+ ++VHLL + R+S++K+A Q +A++ P+ + + D+ ALRQ Y E+ P VP RAAG+R V+ D + +E L +PP P + L+L+EM L G G GSLSL SFEP+FMR P +L +E IWLNPDY P LLWD++M DS+ +R++M AF+ PL+P+ QQ+VL EL+ D +LVYHC LTP +LPDLVENNPM+AI CLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLEIRELRPLLAILNEDDKPLEQVTSLFLRTFTKNDHFKVGCTICILLQDNLLTSSQRIVSFSILCDLYRSEGTTTNPFLLVFVDALEKGSDLCEQNFIVHLLTTSGAPRDSSKKSAKQWMADFRTNPSPPLHI-DVEALRQNYLERTPLVPQF-RAAGIRNVVTDSEFDLQEHVNNGANLQVPPNEVSSL--------------------NLPCSEALSLEEMSLLSDADVSSGSHGTASSSAASASCTGSLSLLSFEPKFMRLPPSILEPDMTEFIWLNPDYCPTLLWDSTM-LDSTHNIALRELMTCAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAINCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 423
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: A0A7S2RYB1_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYB1_9STRA) HSP 1 Score: 426 bits (1094), Expect = 2.060e-140 Identity = 238/427 (55.74%), Postives = 303/427 (70.96%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGT-NPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARK-NALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEEVGLWLPPRPEDQAGRARGGVALRGGIAGGRREPEA---PIQPLTLDEMRLGEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
+L EL LL +L+ + + LE V FQR F+RNDH+K+ CAL +LL D LLTRTQR++SF +L +L+ N NPFLP FL +E +D E+ ++ L+ R+S RK +A ++ + + A EVP+++ LRQ + + +P+ P L A VRPV+ DP +E GL + P A GG A A PEA P + L+ DEMR G + ++ L P F RP+PP+L + D+E++W+NPDYAPRLLWD+++ +D++KG EVR++M+KAFKGPL +QQ VLNEL+ND RLVYHCGLTP KLP+LVENNP+IAIECLLKLMSS+Q+ EYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIR KIINV+
Sbjct: 5 LLTRAELDALLTVLSVDGNPLEAVLADFQRAFSRNDHYKLCCALNILLVDQLLTRTQRIISFFVLHELFGLAGNAAVNPFLPSFLATLEGPSDTPEQPFVAGLIGPSSAYRDSVRKKSARDLLEDLVQRKAMPAEVPNVATLRQKHLDSSPSPPGLDSAT-VRPVVHDPL---DENGLGVVP--------AAGG-AXXXXTASPSPRPEAHFAPTESLSPDEMRELLGPEAAAMGLGGLRPPFPRPMPPLLTVTDAELMWINPDYAPRLLWDSTLCRDNAKGQEVRELMSKAFKGPLKLDEQQHVLNELENDNRLVYHCGLTPQKLPELVENNPIIAIECLLKLMSSNQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRTKIINVQ 418
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: F0W6B0_9STRA (CCR4-NOT transcription complex subunit 11 n=2 Tax=Albugo TaxID=65356 RepID=F0W6B0_9STRA) HSP 1 Score: 427 bits (1097), Expect = 4.640e-140 Identity = 240/430 (55.81%), Postives = 298/430 (69.30%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNE-ANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEEV---GLWLPPRPEDQAGRARGGVALRGGIAGGRREPEAP-IQPLTLDEM---RLGEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+ +EL PLL +L++ D LE V F + +T+NDHF++GC + +LL DNLLT QR + FSIL DLYRNE ++ NPFLP FL A EKG D E+++L HLL S ++R +K+A V+ E+ + V D+ L+ Y E+ PAVP L RA+G+R V+ D ++ +E G L P + V+L P + T++E + G G LSL SFEP FMRP P +L SE+IWLNPDY P +LWD +M +D+S E+RD+M+KAF PL+P+ QQ+VL EL D ++VYH LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 65 MLEMRELRPLLAILSESDKPLEQVTNAFLKTYTKNDHFRIGCIVSILLQDNLLTSAQRFIGFSILFDLYRNEGSHAINPFLPIFLNAYEKGNDVYEKKFLSHLLSSA-SSRELNKKSANAVLQEFRSDTTQTVHAIDVDKLQAWYQERTPAVPQL-RASGIRNVIADSELDYQEHMNNGNCLQLAPNE--------VSLA----------NIPCLDEWTMEEFSEEKDASGKTNGYLSLLSFEPPFMRPPPSVLEPEMSELIWLNPDYCPSVLWDDTMFEDASHELELRDLMSKAFLNPLIPSHQQKVLAELDADPKIVYHSALTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 474
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: A0A836CN98_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN98_9STRA) HSP 1 Score: 422 bits (1086), Expect = 3.640e-139 Identity = 241/436 (55.28%), Postives = 299/436 (68.58%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTN-----RNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPA-----VPTLSRAAGVRPVLQDPSVEGEEVGL----WLPPRPEDQAGRARGGVALRGGIAGGRREPEAPIQPLTLDEMRLGEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+ ++L LL +L+D ++ +E VA +FQR F D+F++GC++C+LL DNLLT QRV + +L ++ ++G+NPF L+ E+ D ER+ R A A V+ E+E +P D+++LR+ ++E+ P L RAAG+RPVL DP G G W AG RG A GRR PE P+ P + M L EG +GGSL++ FEPE +RPVPP+LP+ SEV+WL+P+YAPR LWD S+GQDSS+GAEVR ++ +AFK PL AQQQQVL ELQ D+RLVY CGLTP KLP LVENNPMIA+ECL +LMSSSQITE+LSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENI+DKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLEPRQLDDLLTVLSDNEEAVETVAGRFQRAFAATDYFRIGCSVCMLLADNLLTSAQRVAAIILLWSWGKDGSSGSNPFHGTLLQIAEETADARERRLXXXXXXXXXXXXXXXXRAWALLPAAAVLGEFE-SPQSEEGASDVTSLRRAHAERERGGAGVRAPGL-RAAGLRPVLADPCEGGRTWGTGGSAWF-------AGGPRGAGKRP---AAGRRAPETPLPP---EAMALMEGPEGGSLTMEGFEPEIIRPVPPLLPVEASEVMWLHPEYAPRFLWDASLGQDSSRGAEVRQLVGRAFKAPLPQAQQQQVLAELQADSRLVYLCGLTPQKLPALVENNPMIAVECLQRLMSSSQITEHLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIRDKYMQNRLVRLVCVFLQSLIRNKIINVQ 421
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Match: A0A067CRR8_SAPPC (CCR4-NOT transcription complex subunit 11 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRR8_SAPPC) HSP 1 Score: 409 bits (1050), Expect = 5.000e-134 Identity = 238/429 (55.48%), Postives = 300/429 (69.93%), Query Frame = 2
Query: 20 MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDNLLTRTQRVVSFSILCDLYRNEANGTNPFLPFFLEAIEKGT-DPVERQYLVHLLC---SPPTNRNSARKNALQVIAEYERTPAEAVEVPDLSALRQLYSEKNPAVPTLSRAAGVRPVLQDPSVEGEEVGLW-LPPRPEDQAGRARGGVALRGGIAGGRREPEAPIQPLTLDEMRLGEGGDGGSLSLASFEPEFMRPVPPMLPIADSEVIWLNPDYAPRLLWDTSMGQDSSK--GAEVRDVMAKAFKGPLLPAQQQQVLNELQNDARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVE 1285
ML+A+E+ PLL LL++ED +E V F R FT+NDHFKVGC +C++L DN+LT QRVV FSIL +++RNE N TNPF P +EA+E DP E++YL+HLL +P + + NA Q++ + R + + +L A +QLY ++ P VP S + G+R VL ++E +E G + L P D IA + E LT D++ L + +L S P F+RP P +L SE +WL+PDY P LLWDT M +D+ G E+RD+MAKAF GPL+P+QQQ+VL +L+ D +LVY C LTP++LPDLVENNPMIAIECLLKLM+S+QITEYLSALVNMDMSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+
Sbjct: 1 MLEAREMGPLLALLSEEDKSVEVVVSMFLRSFTKNDHFKVGCMVCLMLADNVLTSNQRVVGFSILSEVFRNETN-TNPFFPSLVEALEAPHGDPAEKRYLIHLLARMSAPGSEPSKKNLNAKQLLQHF-RNETKVASL-NLDAEKQLYFDRTPRVPE-SLSQGIRGVLPYSALEFQEHGNYNLLLAPAD--------------IAAMTLDDEPT---LTADDLNL------ETCTLQSVNPVFVRPAPTILEPEISEYMWLDPDYCPTLLWDTGMYEDADVDCGRELRDLMAKAFVGPLVPSQQQKVLADLEADPKLVYACQLTPARLPDLVENNPMIAIECLLKLMTSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQ 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig305.8261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig305.8261.1 >prot_H-paniculata_contig305.8261.1 ID=prot_H-paniculata_contig305.8261.1|Name=mRNA_H-paniculata_contig305.8261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp MLDAQELTPLLQLLNDEDDILENVAQKFQRIFTRNDHFKVGCALCVLLCDback to top mRNA from alignment at H-paniculata_contig305:16990..24746+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig305.8261.1 ID=mRNA_H-paniculata_contig305.8261.1|Name=mRNA_H-paniculata_contig305.8261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7757bp|location=Sequence derived from alignment at H-paniculata_contig305:16990..24746+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig305:16990..24746+ >mRNA_H-paniculata_contig305.8261.1 ID=mRNA_H-paniculata_contig305.8261.1|Name=mRNA_H-paniculata_contig305.8261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at H-paniculata_contig305:16990..24746+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |