mRNA_H-paniculata_contig30468.8254.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A6H5KDZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 9.140e-10 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 25 VIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKALER 213
+ + EDN+GA + N S+ R++HIDV+ H + ++GK+ Y TGEQHAD+LTKAL R
Sbjct: 68 IKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKALGR 130
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A6H5GUV6_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GUV6_9HEMI) HSP 1 Score: 61.6 bits (148), Expect = 2.340e-9 Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 22 PVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKAL 207
PV +K DN+GA+++A N + RT+HID++HH+V AVE K+ + + T E AD+LTKAL
Sbjct: 517 PVSLKNDNRGAQELARNPVYHSRTKHIDIRHHVVREAVEEKKIVLQHTPTEEMTADILTKAL 578
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A6H5HSM1_9HEMI (Integrase catalytic domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HSM1_9HEMI) HSP 1 Score: 60.5 bits (145), Expect = 6.060e-9 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 22 PVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKAL 207
PV +K DN+GA+++A N + RT+HID++HH V AVE K+ + + T E AD+LTKAL
Sbjct: 816 PVSLKNDNRGAQELARNPVYHSRTKHIDIRHHFVREAVEEKKIVLQHTPTEEMTADILTKAL 877
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A5K1JYL8_9APHY (Isocitrate lyase (ICL) (Isocitrase) (Isocitratase) (MICA) -isocitrate glyoxylate-lyase))) (Fragment) n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1JYL8_9APHY) HSP 1 Score: 58.5 bits (140), Expect = 1.120e-8 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 40 DNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKALER 213
DNQ A +A N+ + RT+HI V+HH + + +E G++ V Y TG+Q ADVLTKAL R
Sbjct: 130 DNQSAMALAKNSEFHDRTKHIAVRHHFIRDEIEEGRIRVAYVPTGDQVADVLTKALAR 187
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A8J6HPC5_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HPC5_TENMO) HSP 1 Score: 59.7 bits (143), Expect = 1.140e-8 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 25 VIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKAL 207
II DNQGA +++ NN + RT+H+D++HH + AVE G + V Y T + ADVLTK L
Sbjct: 1056 TIIFNDNQGAGQLSKNNVFHNRTKHVDIRHHFIREAVERGDIKVEYLPTDQMPADVLTKGL 1116
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A0P1A9P4_PLAHL (FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9P4_PLAHL) HSP 1 Score: 56.6 bits (135), Expect = 1.730e-8 Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 22 PVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKALERSCF 222
PV I EDNQG+ +A N ++RT+HID+++H+V VE G+V ++Y T AD++TK + + F
Sbjct: 28 PVRIFEDNQGSFALAKNPEFHKRTKHIDIRYHLVREKVEGGQVILLYCSTKAMKADMMTKPITAAQF 94
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A6V7M3Q4_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7M3Q4_9HYME) HSP 1 Score: 57.0 bits (136), Expect = 1.950e-8 Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 22 PVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKAL 207
P+ I EDN G +A+N ++++T+HID+K+HI+ +E G + + Y TG+Q D LTK+L
Sbjct: 72 PISIHEDNMGCISIANNPTNHKKTKHIDIKYHIIRKQIEKGLIILKYVPTGKQLTDALTKSL 133
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 2.090e-8 Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 25 VIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKALER 213
+ + EDN+GA + N S+ R++H+DV+ H++ ++GK+ Y TGEQHAD+LTK L R
Sbjct: 536 IKVLEDNKGALALIENPFSSSRSKHLDVRFHVIRELFKSGKITAEYVPTGEQHADMLTKVLGR 598
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A182GDI5_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDI5_AEDAL) HSP 1 Score: 55.8 bits (133), Expect = 2.200e-8 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 22 PVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKALERSCF 222
P+ I+ DNQ +A N N RT+HID++HH + +A+E G V++ Y T +Q AD LTK L+R F
Sbjct: 25 PIEIRCDNQSCIAIAKNGGYNPRTKHIDIRHHYIRDALEQGIVNLSYVCTEDQVADGLTKPLQRVKF 91
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Match: A0A0A9Y2Q5_LYGHE (Copia protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y2Q5_LYGHE) HSP 1 Score: 56.2 bits (134), Expect = 2.290e-8 Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 22 PVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVDVVYAGTGEQHADVLTKAL 207
PV++ DNQGA+K++ N +RR++HID++ + + +AV G+V + Y T E ADVLTK L
Sbjct: 44 PVVLCNDNQGAQKLSSNPVFHRRSKHIDIRMYFIRDAVNNGEVKLEYVPTEEMVADVLTKGL 105 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30468.8254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30468.8254.1 >prot_H-paniculata_contig30468.8254.1 ID=prot_H-paniculata_contig30468.8254.1|Name=mRNA_H-paniculata_contig30468.8254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp MSTLEHYPVIIKEDNQGAEKMAHNNHSNRRTRHIDVKHHIVGNAVEAGKVback to top mRNA from alignment at H-paniculata_contig30468:2474..2695- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30468.8254.1 ID=mRNA_H-paniculata_contig30468.8254.1|Name=mRNA_H-paniculata_contig30468.8254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=222bp|location=Sequence derived from alignment at H-paniculata_contig30468:2474..2695- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30468:2474..2695- >mRNA_H-paniculata_contig30468.8254.1 ID=mRNA_H-paniculata_contig30468.8254.1|Name=mRNA_H-paniculata_contig30468.8254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig30468:2474..2695- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |