mRNA_H-paniculata_contig3045.8249.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 141 bits (356), Expect = 2.340e-34 Identity = 77/268 (28.73%), Postives = 145/268 (54.10%), Query Frame = 1
Query: 10 EPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGITK 813
+P ++ +A + + +W++A E E++ GV+ +V P++ ++ + ++K K DG VEKYK RLV G + G+ + E P + S +++L+LAA DWE+ + + A+L + +EI++++P ++ AVWRL KA+Y QA R W + +A+ G + AD C+F+K +D +I +Y D+ ++ + + + +DL S + +L + + L TR+R++R I + Q Y + ER G+ +
Sbjct: 994 DPLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKW--VFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHP-PIIAVYVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMAE 1258
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A4S4KBB0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4KBB0_9APHY) HSP 1 Score: 135 bits (340), Expect = 2.110e-33 Identity = 82/269 (30.48%), Postives = 134/269 (49.81%), Query Frame = 1
Query: 1 LPVEPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
L P H+EA A + WK AE E++ + ++T+V PK +V + KR DG V KYK RLV G I GV + E P S + +L+LAA+ + E+ + + A+L + +EI+++ P ++ G VW+L+K++Y QA W A+F G +S D +F K DG ++ + D LLIS + P I + +DL + ++ +L +A + L RDR + + + Q Y ++ RFG+
Sbjct: 141 LSEPPLTHKEAMARPDAPQWKLAEIAEIEAFVKAKLFTEVNKPKGRRLVDCKWVYTIKRG--PDGEVIKYKARLVARGFTQIEGVDYNETFAPVSKFTSIRSLLALAAVHNLEIHQMDVKSAFLNGDLNEEIYMQCPPGFKAKDGNVWKLNKSLYGLKQASCEWYKRVCAEFKTMGFTRSDHDHAIFFKYEDGHLLIAAVYVDDMLLISDRMPAIQ-KLKSDLSTRFEMTDLGEAHWILNMEIVRDRPRHTLTLTQRQYTETILNRFGL 406
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 138 bits (347), Expect = 3.680e-33 Identity = 85/267 (31.84%), Postives = 142/267 (53.18%), Query Frame = 1
Query: 10 EPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMF-HKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
EPR+ EAQAS E +W++A + E L G W + PK+ V +++RK ++G V KYK RLV G I G+ F E P S + +L+LA + +WE+ + + AYL + +EI++ P + + G + RL K +Y Q+GR W+ + + T G ++ AD C++ + +GEV +I ++ D+LL+ T PK+ E DL+ ++ +L + + +G RDR+ KI I Q Y S+ +R+ +
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKW--VFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEV-QIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQL 1169
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A2R6NZJ8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NZJ8_9APHY) HSP 1 Score: 137 bits (346), Expect = 4.940e-33 Identity = 83/269 (30.86%), Postives = 134/269 (49.81%), Query Frame = 1
Query: 1 LPVEPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
L P H+EA A + WK AE E++ + ++T+V PK +V + KR DG V KYK RLV G I GV + E P S + +L+LAA+ + E+ + + A+L + +EI+++ P ++ G VW+L+K++Y QA R W A+F G +S D +F K DG ++ + D LLIS P I + +DL + ++ +L +A + L RDR + + + Q Y ++ RFG+
Sbjct: 965 LDEPPLTHKEAMARPDASQWKLAEIAEIEAFVKAKLFTEVNKPKGRRLVDCKWVYTIKRG--PDGEVIKYKARLVARGFTQIEGVDYNETFAPVSKFTSIRSLLALAAVHNLEIHQMDVKSAFLNGDLNEEIYMQCPPGFKAKDGNVWKLNKSLYGLKQASREWYKRVCAEFKTMGFTRSDHDHAIFFKYEDGHLLIAAVYVDDMLLISDHMPAIQ-KLKSDLSTRFEMTDLGEAHWILNMEIVRDRPRHTLTLTQRQYTETILNRFGL 1230
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 135 bits (339), Expect = 4.250e-32 Identity = 82/265 (30.94%), Postives = 139/265 (52.45%), Query Frame = 1
Query: 13 PRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
PR+ EA+AS E +WK+A + EM + + G +T+ + P + ++ +K EDGN+ +YK RLV G I GV + E P S + L +AAI+D E+ + + AYL + +EI++ P Y + G V RL K +Y Q+GR W+ E T+ G + AD C++ +I +G + +I ++ D+LLI ++ + E +L + +K+L + + +G RDR+ I++ Q Y + RFG+
Sbjct: 879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKW--VFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGM 1140
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A2R6NJS8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NJS8_9APHY) HSP 1 Score: 134 bits (338), Expect = 5.500e-32 Identity = 82/270 (30.37%), Postives = 136/270 (50.37%), Query Frame = 1
Query: 10 EPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKM--MLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYRE--FRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
EPR +REA S+ K W+ A +E + L D G V+ P + + S +++Y+ K DGN+ K+K R+V G + G + + T + +S A QDWEL + AYLQ + +EI++++P +E G WRL KA+Y Q+GR W + G E+ AD C++ DG +V ++++Y D++ ++ K + F DL + + D + LG R+R+ R I+++Q Y R +RFG+
Sbjct: 562 EPRTYREAAQSAYSKQWEEALGIEYRQLQDTGTIEWVKTPPSEAIGS---LVVYRAKHDGDGNLAKFKARIVARGCSQVPGRDYNPLFVSSSVFRFTTLRAFMSFVADQDWELHQMDVVGAYLQGDLDEEIYMKVPEGIKEPGKEGWCWRLKKALYGLKQSGRQWKKKLDEAMAELGFEKGQADECLYVLKEDGHIVLMVLVYVDDMAVAGKKLALVKRFKHDLAERFDITDGGDLTFILGVQVIRNRQNRTIHMNQTTYIRGFLDRFGM 828
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR) HSP 1 Score: 132 bits (333), Expect = 2.250e-31 Identity = 83/266 (31.20%), Postives = 138/266 (51.88%), Query Frame = 1
Query: 10 EPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
+P+++ EA + + + WK A E+ + ++ +VE P++ VV + KR DG +EKYK R+V G + GV + + P AS + +L+LAA D E+ + + A+L + +EIF+ P ++ R VW+L KA+Y QA R W + A+F + G +S+AD +F+K DG V+ ++ +Y D++LI ADL S + + +L +AR L RDR +R I + Q Y S+ G+
Sbjct: 281 DPQSYEEAMSRPDAERWKAACAEELLTFVKAELYDEVERPRDRKVVGCKWVFRIKRG--PDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNEDG-VLLIVAVYIDDMLIFCNSLPAVEALKADLGSHYDMTDLGEARRILNIKIIRDRARRTIELTQRQYVESILTHQGM 543
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A0J7KG03_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KG03_LASNI) HSP 1 Score: 132 bits (331), Expect = 4.440e-31 Identity = 87/260 (33.46%), Postives = 131/260 (50.38%), Query Frame = 1
Query: 7 VEPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIP--VIYREFRGAVWRLDKAIYVWVQA-GRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLY 777
+P N EA SS+ W +A E E L NG WT V+ PK+ + T + KR + G +++YK RLV G I G+ + E P S + + +LA D + + AYL I QEI+V+ P ++ +G VWR +Y+ +A GR W+ + T G ++S AD C++ K D + + +I +Y D+LLI K+ L +K+L +A+Y LG + TRDRK RKI +DQ Y
Sbjct: 627 TDPENLEEALNSSDSVTWIKAMEEERDFLAKNGTWTLVDLPKDKRALDTKWVFKTKRDVT--GQIKRYKARLVVRGCSQIEGIDYNETYSPVVRYTSIQFLCALAVKHDLYMDQMDVTAAYLHGDIEQEIYVKPPEELVKSGEKGKVWR--PKVYIRTEASGRAWNKKFHDTLTDMGFKRSQADSCVYFKR-DNKSLVIIAVYVDDLLILASNEKVKTSLKKKLSQTFDMKDLGEAKYLLGMNITRDRKARKIWLDQSTY 881
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A150G7P2_GONPE (Integrase catalytic domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7P2_GONPE) HSP 1 Score: 131 bits (330), Expect = 5.680e-31 Identity = 84/271 (31.00%), Postives = 141/271 (52.03%), Query Frame = 1
Query: 1 LPVEPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQA-LIGQEIFV-EIPVIYREFRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGI 807
LPV P N EA++ + WK+A + E+ L N WT V+ + V+ + Y+ GN+E+YK RLV G + G+ F E P A+ + LS+ A++D EL + + A+L L ++ V ++P + R RL+KA+Y QA R W ++ A G + S +D +F K DG+ V +++Y D+LLI+ + A+ + L S ++++L +AR++LG RDR R + + Q YA ++ +FG+
Sbjct: 504 LPVPPDNIEEAKSRPDWPMWKKACDEEIASLYCNNTWTLVQVSRATRVIGVKWVFSYE--FDASGNIERYKARLVAKGYSQVAGIDFDEVFAPVSKHATLRAFLSVVAVRDLELHQLDVKTAFLNGELEDDDLHVAQLPGYEQGGRDTACRLNKALYGLRQASRTWYERLRSELKAMGFKPSESDPGLFVKEEDGDRV-FLLVYVDDLLIAAMKLETVAQIKSRLMSKFEIRDLGEARFFLGYEIERDRAARTLKLSQKRYAETVLAKFGM 771
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Match: A0A6G0J2S8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0J2S8_LARCR) HSP 1 Score: 130 bits (327), Expect = 6.610e-31 Identity = 79/270 (29.26%), Postives = 136/270 (50.37%), Query Frame = 1
Query: 10 EPRNHREAQASSERKDWKRAEEVEMQGLIDNGVWTQVECPKNNLVVSTMMMMIYKRKIREDGNVEKYKCRLVGHGNR*ITGVHFQEALCPAPAAASTKMMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYRE--FRGAVWRLDKAIYVWVQAGRCWSMEATADFTAKGSEQSHADRCMFHKIVDGEVVAVIIIYADNLLISTKGPKIAAEFLADLRSDHKLKELRDARYYLGCHTTRDRKKRKINIDQHLYARSMAERFGITK 813
EP +EA SS K+WK A ++E + L++N W VE PK+ + ++K K DG VE+YKCRLV G GV + E P +S + +LS A + + + A+L + +EI++E P Y + V +L K+IY Q+ RCWS T G QS +D C+F + + + ++ +Y D+L++ T+ + E L+ +K+K++ + Y LG +D+ + + Q Y ++ +++G+ K
Sbjct: 136 EPTTMKEAMLSSNAKEWKEAADLEYESLLENETWDLVELPKDRKPIG--QRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIKPGQEHLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRA--RQELEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDK 401 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3045.8249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3045.8249.1 >prot_H-paniculata_contig3045.8249.1 ID=prot_H-paniculata_contig3045.8249.1|Name=mRNA_H-paniculata_contig3045.8249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp MMLSLAAIQDWELRNVYFEHAYLQALIGQEIFVEIPVIYREFRGAVWRLDback to top mRNA from alignment at H-paniculata_contig3045:99..911- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3045.8249.1 ID=mRNA_H-paniculata_contig3045.8249.1|Name=mRNA_H-paniculata_contig3045.8249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=813bp|location=Sequence derived from alignment at H-paniculata_contig3045:99..911- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3045:99..911- >mRNA_H-paniculata_contig3045.8249.1 ID=mRNA_H-paniculata_contig3045.8249.1|Name=mRNA_H-paniculata_contig3045.8249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at H-paniculata_contig3045:99..911- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |