prot_H-paniculata_contig3024.8198.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3024.8198.1
Unique Nameprot_H-paniculata_contig3024.8198.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length174
Homology
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 141 bits (355), Expect = 5.600e-38
Identity = 65/174 (37.36%), Postives = 108/174 (62.07%), Query Frame = 0
Query:    1 MEDLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVE-GEVKILAPNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGHGLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            ++D+G +  VLG+ +RRDR    +TISQ +Y++ +LKR+G ++C+   TP+E G+     P+ +   N +EY+ ++G L Y +T +RPD+A AV   ++ M  P ++     KR+ R +    + G+   GK+    L G+ DADWA D + R+ST+GYVF +NG  +SW S++
Sbjct:   15 VDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKR 188          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A177VLY9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VLY9_9BASI)

HSP 1 Score: 144 bits (363), Expect = 9.570e-37
Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 0
Query:    3 DLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKIL-APNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGH-GLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            DLG     LGI + R+   D IT+ Q  Y +EVL R+G  +C    TP++ +  +  A + +   +  EY+ +VG L Y + G+RPD+AYAV    R   DP     +   R+ R L       +T GG  +G+  LEGFVD+DWA D +DR+ST+G+VFT+ GGA+SW SRK
Sbjct:  535 DLGPAHHCLGIRINRNWDEDTITLDQERYAKEVLARFGMSDCNPARTPMDQKTSLRKAADGEARADKREYQAIVGCLAYLAQGTRPDLAYAVSTLGRYGSDPTETHRTAANRVLRYLKRTSSAKLTFGGSRDGNVNLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRK 707          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A177VUP4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VUP4_9BASI)

HSP 1 Score: 140 bits (353), Expect = 1.430e-36
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 0
Query:    3 DLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKIL-APNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGH-GLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            DLG     LGI + R+  +  IT+ Q  Y +EVL R+G  EC +  TP++ +  +  A + +   +  +++ +VG L Y + G+RPD+AYAV    R   DP         R+ R L       +T GG+ +G+  LEGFVD+DWA D +DR+ST+G+VFT+ GGA+SW SRK
Sbjct:  135 DLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANLRKATDGEARADKKKFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRK 307          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A6S7KSC5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KSC5_PARCT)

HSP 1 Score: 135 bits (341), Expect = 2.210e-36
Identity = 69/174 (39.66%), Postives = 105/174 (60.34%), Query Frame = 0
Query:    1 MEDLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVE-GEVKILAPNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGHGLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            +EDLG +S +LG+ ++RDR +  +TISQ  Y+  VLKR+  +EC+   TP+E G+      + +   N  EY+ ++G L Y +T +RPD+A AV   ++ M  P ++     KRI R +    + GIT   K+    L G+ DADWA D E R+ST+GY+F ++G  ISW S+K
Sbjct:   55 VEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDETPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKK 228          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A177T2R9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T2R9_9BASI)

HSP 1 Score: 136 bits (343), Expect = 3.910e-36
Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 0
Query:    3 DLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKIL-APNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGH-GLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            DLG     LGI + R      IT+ Q  Y +EVL R+G  +C    TP++ +  +  A + +   +  E++ +VG L Y + G+RPD+AYAV    R   DP         R+ R L       +T GG+ +G+  L GFVD+DWA D +DR+ST+G+VFT+ GGA+SW SRK
Sbjct:   34 DLGPAHHCLGIRISRSWEEGTITLDQERYAKEVLARFGMSDCNPAKTPMDQKASLRKAVDGEARADKKEFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGATLTFGGQKDGNVSLAGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRK 206          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A177V816_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia caries TaxID=13290 RepID=A0A177V816_9BASI)

HSP 1 Score: 142 bits (357), Expect = 6.220e-36
Identity = 70/173 (40.46%), Postives = 102/173 (58.96%), Query Frame = 0
Query:    3 DLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKIL-APNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGH-GLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            DLG     LGI + R+  +  IT+ Q  Y +EVL R+G  EC +  TP++ +  +  A + +   +  E++ +VG L Y + G+RPD+AYAV    R   DP         R+ R L       +T GG+ +G+  LEGFVD+DWA D +DR+ST+G+VFT+ GGA+SW SRK
Sbjct:  540 DLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANLRKATDGEARADKKEFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRK 712          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 134 bits (338), Expect = 2.070e-35
Identity = 68/174 (39.08%), Postives = 106/174 (60.92%), Query Frame = 0
Query:    1 MEDLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKILAPNSKRSGNPS-EYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGHGLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            +++LG L   LGI + R+R +  I ++Q +YI+ + +++G ++C++  TP +   K++ P+      P   YR +VG+LMY +T +RPD+A AV + A+  E   +      KRI + L T  DLG+   G   G  L G+ DA+WA D + R+STTGYVF LNG AISW S++
Sbjct:   23 IKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKR 195          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A443S3D3_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S3D3_9ACAR)

HSP 1 Score: 138 bits (347), Expect = 2.600e-35
Identity = 69/169 (40.83%), Postives = 102/169 (60.36%), Query Frame = 0
Query:    4 LGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKILAPNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGHGLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSR 172
            +G L+  LG+ V R R    + ++Q SYI+++L +YG  +C+S  TP++  VK+    SK       YR +VGSLMYA  GSRPD+ YAV + A+ ++       +  KR+ R L   P  GIT    ++   L G+ DAD+A D + R+ST+GY+F L+GGA+SW SR
Sbjct:  330 VGKLNSFLGLQVIRHRKEKLLNVNQESYIQKMLNKYGMTDCKSVKTPMDATVKLTKSESKSC--EFSYRELVGSLMYAMLGSRPDICYAVGKLAQFLDCYDETHWTAAKRVLRYLKGTPKHGITFNANSSSPNLYGYCDADYAGDLDSRRSTSGYIFILSGGAVSWMSR 496          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A177VM55_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VM55_9BASI)

HSP 1 Score: 139 bits (351), Expect = 4.400e-35
Identity = 70/173 (40.46%), Postives = 100/173 (57.80%), Query Frame = 0
Query:    3 DLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKIL-APNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGH-GLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            DLG     LGI + R+  N  IT+ Q  Y +EVL R+G  EC    TP++ +  +  A + +   +  E++ +VG L Y + G+RPD+AYAV    R   DP         R+ R L       +T G + +G+  LEGFVD+DWA D +DR+ST+G+VFT+ GGA+SW SRK
Sbjct: 1188 DLGPAHHCLGIRISRNWENGTITLDQERYAKEVLSRFGMTECNPAKTPMDQKASLRKATDDETRADKREFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGAKLTFGEQKDGNVSLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRK 1360          
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 134 bits (336), Expect = 1.310e-34
Identity = 72/174 (41.38%), Postives = 102/174 (58.62%), Query Frame = 0
Query:    1 MEDLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTPVEGEVKILAPNSKRSG-NPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRMEDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGHGLEGFVDADWAEDFEDRKSTTGYVFTLNGGAISWFSRK 173
            M+DLG LS +LGI V +D+  + I + Q  YI  +LK+YG D+     TP +  VK+   +   +  +PS Y+ MVGSL+YA+  +RPD+A AV   ++   +P     +  KRI R L    +L +      N   L GF DADWA D +DR STTG +F L+GGA+SW S+K
Sbjct:   80 MKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPVDPSTYQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGN-KDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKK 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3024.8198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT5.600e-3837.36Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A177VLY9_9BASI9.570e-3741.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VUP4_9BASI1.430e-3639.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7KSC5_PARCT2.210e-3639.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T2R9_9BASI3.910e-3639.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177V816_9BASI6.220e-3640.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB69_PHYRM2.070e-3539.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A443S3D3_9ACAR2.600e-3540.83Integrase core domain protein-like protein (Fragme... [more]
A0A177VM55_9BASI4.400e-3540.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A0S7JP25_9TELE1.310e-3441.38POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 28..173
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 28..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3024contigH-paniculata_contig3024:2406..3005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3024.8198.1mRNA_H-paniculata_contig3024.8198.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3024 2118..3404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3024.8198.1 ID=prot_H-paniculata_contig3024.8198.1|Name=mRNA_H-paniculata_contig3024.8198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MEDLGSLSRVLGIGVRRDRPNDAITISQGSYIREVLKRYGFDECRSGPTP
VEGEVKILAPNSKRSGNPSEYRGMVGSLMYASTGSRPDMAYAVYQAARRM
EDPCRKDSSRCKRIFRCLSTVPDLGITLGGKNNGHGLEGFVDADWAEDFE
DRKSTTGYVFTLNGGAISWFSRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like