prot_H-paniculata_contig301.8169.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig301.8169.1
Unique Nameprot_H-paniculata_contig301.8169.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
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BLAST of mRNA_H-paniculata_contig301.8169.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.030e-23
Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 0 
Query:    9 VDIISMLAELMEDTQYLFFTSVTKAWRNAWGQQRPHLTRAVTPHSTVSQLRESFECGLARTPNVCAATAGIGKLDLLQFARETGCPWNLQT 99
            VDI+S +AE ++D QYLFF SV++ WR+ WG+ RP +T+A+T  ++V QL  SFECGL RT  VC   AG+G+LDLL+ AR  GC WN  T
Sbjct:    7 VDIVSTVAEFVDDNQYLFFASVSRGWRDVWGK-RPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCQWNENT 96
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BLAST of mRNA_H-paniculata_contig301.8169.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 3.380e-17
Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 0 
Query:    5 LVTNVDIISMLAELMEDTQYLFFTSVTKAWRNAWGQQRPHLTRAVTPHSTVSQLRESFECGLART-PNVCAATAGIGKLDLLQFARETGCPWN 96
            L  NVD++  +   + + Q+LFF  V++AWR AWG  RP +T  VT  S+VSQLR SFE GL R  P +CAA A +G L+LL+ AR +GC WN
Sbjct:   57 LADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGC-RPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWN 148
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BLAST of mRNA_H-paniculata_contig301.8169.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 3.500e-17
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0 
Query:    1 MEHPLVTNVDIISMLAELMEDTQYLFFTSVTKAWRNAWGQQRPHLTRAVTPHSTVSQLRESFECGLARTPN-VCAATAGIGKLDLLQFARETGCPWNLQT 99
            M +P     D+IS  +E + D Q+LFF SV++AWR AW + RP  TRA+TP ++ SQLR S +CGL+     VC A A +G+LDLL+ AR  G  W+  T
Sbjct:    1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAW-RGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMT 99
[Close]
BLAST of mRNA_H-paniculata_contig301.8169.1 vs. uniprot
Match: D7FH77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH77_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 6.550e-16
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0 
Query:    6 VTNVDIISMLAELMEDTQYLFFTSVTKAWRNAWGQQRPHLTRAVTPHSTVSQLRESFECGLART-PNVCAATAGIGKLDLLQFARETGCPWNLQT 99
            + N DI+  L   + D  +LFF  V + WR AWG  RP  TR  T   T +QL+  F+CGL RT P +CAA A +G +DLL+ AR+ GC W   T
Sbjct:   10 LNNPDILGCLISFVADESFLFFGPVCRDWRAAWGN-RPTTTRIATSDLTPTQLQRGFDCGLTRTNPELCAAIARLGDVDLLELARDNGCRWGAST 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig301.8169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L0J7_9PHAE1.030e-2354.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPZ6_9PHAE3.380e-1750.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDD9_ECTSI3.500e-1747.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FH77_ECTSI6.550e-1645.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 66..385
e-value: 4.7E-18
score: 66.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 102..355
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 75..153
coord: 156..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig301contigH-paniculata_contig301:27651..28829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig301.8169.1mRNA_H-paniculata_contig301.8169.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig301 26569..29457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig301.8169.1 ID=prot_H-paniculata_contig301.8169.1|Name=mRNA_H-paniculata_contig301.8169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
MEHPLVTNVDIISMLAELMEDTQYLFFTSVTKAWRNAWGQQRPHLTRAVT
PHSTVSQLRESFECGLARTPNVCAATAGIGKLDLLQFARETGCPWNLQTC
TMAALGGHLTSLQWARQNGCSWDESTCAAAARGRHLSVLRWARENGCLWD
WRTCYNSAQMGDLAILTWARENGCPWAEDTCAAAAWGGHLHVIQWAREHG
CPWNRRVCEKAALGGHLNVLQWARETNCLETSWSICCYAAYGGHLDVVQW
ARANGCSWCLMTTWKAAEGGHLRVFKWALANGCTMDNNTCAVAAKGGHLD
VIRWAFDNGCPLKQNTCIAAAKGGHLEILRWACEKGLPWDKNICKIAACR
GHLHILVWARANGFPWEDNIFPAAAAGKHDHIIQWARGILQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf