prot_H-paniculata_contig30068.8162.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig30068.8162.1
Unique Nameprot_H-paniculata_contig30068.8162.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: UPI00142E31C7 (uncharacterized protein LOC103832254 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E31C7)

HSP 1 Score: 86.3 bits (212), Expect = 9.720e-17
Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPD 149
            MKDL + SR+LG+++ RDR   T+ +SQG Y+++VL+ ++  E + V TP+  + K+            KSL         + +E  + R  N   Y   VGSLMYA  G+RPG+ +AV   +R M  P R  +   K++ RYL    D
Sbjct: 1048 MKDLGAASRILGMDIIRDRKKGTLKLSQGKYLQKVLETFNMAESKAVVTPIGPQFKL------------KSL--------TQKEEHEEARFMNVIPYASAVGSLMYAMVGSRPGLCFAVGLISRYMSKPGRIHWEAVKWVMRYLKGALD 1176          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-16
Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDLGI 152
            MKD+ + SR+LGI+++RDR    + +SQ SY+ +V+K ++  E + V TP+ G  K+SA                    V EV E           Y   VGS+MYA  GTRP IAYA+   +R M  P    +   K++ RY+    DL +
Sbjct: 1063 MKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSA--------------------VKEVSECIDTE---KYPYSSAVGSVMYAMIGTRPDIAYAIGLISRFMSKPGIMHWEAVKWLLRYIRGTADLNL 1191          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A6D2J1R0_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J1R0_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 8.410e-16
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDLGI 152
            MKDL + SR+LGI+++RDR    + +SQ  Y+ +V+K ++  E + V TP+ G  K+SA                       V + ++        Y   VGSLMYA  GTRP +AYA+   +R M  P    +   K++ RY+    DL +
Sbjct: 1068 MKDLGAASRILGIDIKRDRKEGVLWLSQSGYLGKVIKRFNMVEAKTVNTPMGGHFKLSA-----------------------VSDASECVDTEKVPYSSAVGSLMYAMVGTRPDLAYAIGLVSRFMSKPGSIHWEAVKWLLRYVKRSSDLSL 1196          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD)

HSP 1 Score: 83.2 bits (204), Expect = 1.150e-15
Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDLGI 152
            MKD+   SR+LGI+++RDR  DT+ + Q  YI++VLK +   E + V TP+    K+++  + D+  + + +                        Y   VGS+MYA  GTRP +AYA+   +R M  P    +   K++ RYL    DL +
Sbjct: 1061 MKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKV-----------------------PYLSAVGSVMYAMVGTRPDVAYALGLVSRFMSKPGSIHWEAVKWLLRYLRGSADLNL 1189          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A6D2JMB2_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JMB2_9BRAS)

HSP 1 Score: 83.2 bits (204), Expect = 1.150e-15
Identity = 49/144 (34.03%), Postives = 74/144 (51.39%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYL 144
            MKDL   SR+LG+++ RDR   T+ +SQ SYI +VLK +   + +   TP+    K+ +    ++  E           V  ++ +          Y   VGSLMYA  G+RP +AYAV   +R M  P RE ++  K++ RYL
Sbjct: 1160 MKDLGKASRILGMDIIRDREKGTLKLSQESYIEKVLKAFDMADAKSTTTPLATHFKLKSLTKAERKEE-----------VVHMENKP---------YASAVGSLMYAMIGSRPDLAYAVGVISRFMSNPGREHWTAVKWVLRYL 1283          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY)

HSP 1 Score: 82.8 bits (203), Expect = 1.580e-15
Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDLGI 152
            + DL  +  +LG  V RDR   T+ +SQ SYI  +++ + F++ + + TP++    +S+  S    +E     A + DI                 YR  VGSLMYAS GTRP I YAV   +R  + P R  +   K +FRYLS   DL +
Sbjct: 1260 ISDLGEIHWILGFAVERDRTARTLALSQTSYINSIIQRFGFEDLKPLTTPMDPNTTLSSAQSPQTTAE----AAAMRDI----------------PYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKL 1391          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A1J3IYK5_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IYK5_NOCCA)

HSP 1 Score: 81.3 bits (199), Expect = 3.710e-15
Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYL 144
            MKD+   SR+LG+++ RDR   T+ +SQ SYI +VLK +   E +   TP+    ++ +    ++  E   +                      T Y   VGSLMYA  G+RP IAYAV   +R M  P R+ ++  K++ RYL
Sbjct:  115 MKDMGKASRILGMDIIRDRERGTLQLSQESYIEKVLKTFGMTEAKPTTTPLATHFRLKSLTKDERKEEAVHM--------------------EDTPYASAVGSLMYAMIGSRPDIAYAVGVISRFMSNPGRDHWTAVKWVLRYL 238          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A2K3N065_TRIPR (Copia LTR rider n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N065_TRIPR)

HSP 1 Score: 81.6 bits (200), Expect = 3.940e-15
Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDK-PSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLS 145
            MKDL + SR+LGI++RRDR    + +SQ +Y+R++L+ +     + V TP   + K+S    +D+ PS              +V+        NS  Y  +VGSLMYA   TRP IAYAV   +R M  P +  +   K+I RY++
Sbjct: 1019 MKDLGAASRILGIDIRRDRKKSKLCLSQEAYLRKILEKFGMSNSKPVVTPTNPQFKLS----IDQCPS-------------TDVERAYM----NSIPYANIVGSLMYAMVCTRPDIAYAVSLVSRYMANPGKAHWQALKWILRYIN 1143          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A6D2KZJ0_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KZJ0_9BRAS)

HSP 1 Score: 80.9 bits (198), Expect = 5.320e-15
Identity = 49/152 (32.24%), Postives = 74/152 (48.68%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDLGI 152
            MKD+   SR+LGI++RRDR    + +SQ SY+ +V++ +   E + V TP+ G  K+SA                       V E ++        Y  +VGS+MYA  GTRP IAYA+   +  M  P    +   K++ RY+    DL +
Sbjct:  127 MKDMGPASRILGIDIRRDREAGVLYLSQASYLEKVVQKFKMKEAKSVNTPMGGHFKLSA-----------------------VTEDSECIDTEKYPYSSVVGSIMYAMIGTRPDIAYAIGLVSMFMSKPGMMHWEAVKWLLRYIKGSSDLEV 255          
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Match: A0A6D2K0I3_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K0I3_9BRAS)

HSP 1 Score: 81.3 bits (199), Expect = 5.370e-15
Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = 0
Query:    1 MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTPVEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGMVGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDLGI 152
            MKD+ + SR+LGI+++RDR   T+ +SQ  YI +V++ ++    + V TP+    ++S+                        +E  +G       Y   VGS+MYA  GTRP +AYA+   +R M  P    +   K++ RYL +  DL +
Sbjct: 1041 MKDMGAASRILGIDIKRDREKGTLCLSQSRYIEKVIQRFNMSGAKIVTTPIGAHFRLSS-----------------------TKEDEEGVDIEIVPYSSAVGSIMYAMVGTRPDVAYAIGLVSRFMSKPGAVHWEAVKWLLRYLRSSTDLNL 1169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30068.8162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00142E31C79.720e-1734.90uncharacterized protein LOC103832254 n=1 Tax=Brass... [more]
A0A1J3F7G4_NOCCA1.790e-1634.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A6D2J1R0_9BRAS8.410e-1632.24Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]
UPI00142E19AD1.150e-1531.58uncharacterized protein LOC103874474 n=1 Tax=Brass... [more]
A0A6D2JMB2_9BRAS1.150e-1534.03Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A401H4R8_9APHY1.580e-1534.21Uncharacterized protein n=2 Tax=Sparassis crispa T... [more]
A0A1J3IYK5_NOCCA3.710e-1533.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3N065_TRIPR3.940e-1535.62Copia LTR rider n=1 Tax=Trifolium pratense TaxID=5... [more]
A0A6D2KZJ0_9BRAS5.320e-1532.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2K0I3_9BRAS5.370e-1530.26Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF253coord: 93..131
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 93..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30068contigH-paniculata_contig30068:3..458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30068.8162.1mRNA_H-paniculata_contig30068.8162.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig30068 3..1018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig30068.8162.1 ID=prot_H-paniculata_contig30068.8162.1|Name=mRNA_H-paniculata_contig30068.8162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MKDLDSLSRVLGIEVRRDRPNDTITISQGSYIREVLKGYHFDECREVPTP
VEGKLKISAPDSVDKPSEPKSLGAVLSDIVAEVQERTKGRSGNSTEYRGM
VGSLMYASTGTRPGIAYAVHQAARRMEGPCREDFSTCKFIFRYLSTVPDL
GI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like