mRNA_H-paniculata_contig30060.8160.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: D7FQ61_ECTSI (Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences pdb|3C5R|B Chain B, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ61_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.440e-27 Identity = 60/94 (63.83%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 19 ESCLHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIARRLLAYDADW 300
E+CLHVA FEGNV A RYLLS+DADPNSA+ ASG NTPLHEA RGGSLA+ LLLKSSANVLA N+HGD LA+D+DW
Sbjct: 240 ETCLHVASFEGNVPAVRYLLSVDADPNSAHSASGYNTPLHEAARGGSLAVTRLLLKSSANVLAVNSHGDHXXXXXXXXXXXXXXXXXLAHDSDW 333
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: A0A6H5KVI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.150e-26 Identity = 57/94 (60.64%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 19 ESCLHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIARRLLAYDADW 300
E+CLHVA FEGNV A RYLLS+DADPNSA+ ASG NTPLHEA RGGSLA+ LLLKSSANVL N+HGD +D+DW
Sbjct: 110 ETCLHVASFEGNVPAVRYLLSIDADPNSAHSASGYNTPLHEAARGGSLAVTRLLLKSSANVLTVNSHGDHXXXXXXXXXXXXXXXXXXXHDSDW 203
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: UPI001EB0A0C5 (ankyrin repeat and protein kinase domain-containing protein 1-like isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0A0C5) HSP 1 Score: 63.9 bits (154), Expect = 6.720e-10 Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 1
Query: 10 CGRESCLHVACFE-----GNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIARRLLAYDAD 297
C + C+ A F G V + + P N+ ++PLH A+ G S ++ LLL + ++A N +G PLH+ACR+GRLD+AR+LL A+
Sbjct: 7 CEEDCCIDKATFYAYVAGGQVEQVKACIEAGLPPVITNLTEDTDSPLHIAVLGDSTEMVDLLLSHTNFIMATNMYGKTPLHLACRSGRLDVARKLLQRGAE 107
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: A0A024TEG5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEG5_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.380e-7 Identity = 31/93 (33.33%), Postives = 50/93 (53.76%), Query Frame = 1
Query: 28 LHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIAR--RLLAYDADW 300
L A F G VA +Y + P++A TPLH A GGS A++ LL +++A +A+G+ P+H+A R GR ++ + ++ D W
Sbjct: 132 LWTAAFHGRVAEVQYYVRHGLHPDTAEFGYPNQTPLHYAAAGGSAAMVTYLLAMHCSLVAVDANGNTPVHLAARWGRREVIKVMKMETNDGSW 224
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: UPI001C9A3891 (ankyrin repeat domain-containing protein 16-like n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A3891) HSP 1 Score: 55.1 bits (131), Expect = 1.110e-6 Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 19 ESCLHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIARRLL 282
S +H+A F G+ L ++D + +A +SG +TPLHEAI+GG LA+ +++ A+V A + G LHVA G D R +L
Sbjct: 188 RSVMHIAAFHGHEGIIEELATIDPNLANARDSSG-HTPLHEAIKGGHLAVAERIIELRADVRATDNVGQTILHVAALTGNTDAVRYIL 274
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: A0A7S1DFQ7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DFQ7_HEMAN) HSP 1 Score: 52.0 bits (123), Expect = 2.750e-6 Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 118 GLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIARRLL 282
G NT LH A G + + LL++ A+ AANA GD+PLH+ACR G L++ + L+
Sbjct: 6 GGNTALHAAALEGDIGAVSSLLEAGADPAAANAEGDMPLHIACRNGDLEMVKMLV 60
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: A0A7I8VRY7_9ANNE (Hypothetical protein n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VRY7_9ANNE) HSP 1 Score: 53.1 bits (126), Expect = 5.430e-6 Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 19 ESCLHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACRAGRLDIARRLLAY 288
S LH AC G+ +YLL A + GLN PL +A++GGS+ II LL+ + AN+ + G +H+A +A + D+ + L+ +
Sbjct: 171 RSILHTACIHGHCEMVKYLLRKTAISVHLKDSCGLN-PLMDAVKGGSVDIIDLLVTNGANINDTDNLGKSCIHIAAQANQADVIKHLIKH 259
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Match: A0A7M7TE43_NASVI (Uncharacterized protein n=3 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7TE43_NASVI) HSP 1 Score: 50.4 bits (119), Expect = 5.450e-5 Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 1
Query: 28 LHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRGGSLAIICLLLKSSANVLAANAHGDLPLHVACR 249
L+ A +G AA L+ N+ + A +TPLH AI+ GS+ I+ LLL+ A++ A N+ G+ PLH++ +
Sbjct: 43 LNYALAKGQKEAAMMLIERGCRVNNRDFALPADTPLHHAIKFGSIEIVELLLRKGASIEARNSEGETPLHLSAK 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30060.8160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30060.8160.1 >prot_H-paniculata_contig30060.8160.1 ID=prot_H-paniculata_contig30060.8160.1|Name=mRNA_H-paniculata_contig30060.8160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp LPLCGRESCLHVACFEGNVAAARYLLSLDADPNSANIASGLNTPLHEAIRback to top mRNA from alignment at H-paniculata_contig30060:744..1043+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30060.8160.1 ID=mRNA_H-paniculata_contig30060.8160.1|Name=mRNA_H-paniculata_contig30060.8160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=300bp|location=Sequence derived from alignment at H-paniculata_contig30060:744..1043+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30060:744..1043+ >mRNA_H-paniculata_contig30060.8160.1 ID=mRNA_H-paniculata_contig30060.8160.1|Name=mRNA_H-paniculata_contig30060.8160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig30060:744..1043+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |