prot_H-paniculata_contig11275.815.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11275.815.1
Unique Nameprot_H-paniculata_contig11275.815.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
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BLAST of mRNA_H-paniculata_contig11275.815.1 vs. uniprot
Match: A0A6A4G9J9_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9J9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.030e-7
Identity = 36/118 (30.51%), Postives = 60/118 (50.85%), Query Frame = 0 
Query:    1 ALKLAIEEARAEGLPPNRVTELRELVINPYFEAFRRTLGRDPPTDMKPLWVHVPVDARTSRARPRPMSRDKAKWPYDHFTKLAQAGMVITNHQARFNSVAMILPK---KDTYRMLVDY 115
            +L   I++A A G PPN ++ LR  V++ Y + +R   G D P  ++P  V +  D    R +PR     ++ +   H  +L Q G+V  N+ +R+   A+   K   KD +R+  DY
Sbjct:  547 SLGALIQDAEANGFPPNMMSSLRTTVLD-YGDVWRARFGADGPARVRPYSVKLKPDVLPFRCKPRRYPPLQSDFLRSHVAELQQFGLVRLNNASRWACAAVPARKAGLKDAFRLTTDY 663
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BLAST of mRNA_H-paniculata_contig11275.815.1 vs. uniprot
Match: A0A225UJN6_9STRA (Peptidase A2 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJN6_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.110e-6
Identity = 33/115 (28.70%), Postives = 62/115 (53.91%), Query Frame = 0 
Query:    6 IEEARAEGLPPNRVTELRELVINPYFEAFRRTLGRDPPTDMKPLWVHVPVDARTSRARPRPMSRDKAKWPYDHFTKLAQAGMVITNHQARFNSVAMILPK---KDTYRMLVDYHA 117
            ++ A   GLPP  V  +REL +  + + +R T+G DPP  ++ L V + + A   R+ PR  +  +A++  D+   L   G+V  N+ +R+    + + K   +D +R+ +DY +
Sbjct:  131 LDRAATNGLPPEHVDAVREL-LEEFPDVWRETVGADPPATVERLQVTLQLGAVPHRSPPRKYAPMQAQFIRDYVKFLVDNGLVEQNNASRWACAVVPVRKHGTQDRFRLTIDYRS 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11275.815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6A4G9J9_9STRA1.030e-730.51Reverse transcriptase domain-containing protein n=... [more]
A0A225UJN6_9STRA1.110e-628.70Peptidase A2 domain-containing protein n=1 Tax=Phy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 28..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11275contigH-paniculata_contig11275:2536..2886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11275.815.1mRNA_H-paniculata_contig11275.815.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11275 2536..2886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11275.815.1 ID=prot_H-paniculata_contig11275.815.1|Name=mRNA_H-paniculata_contig11275.815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
ALKLAIEEARAEGLPPNRVTELRELVINPYFEAFRRTLGRDPPTDMKPLW
VHVPVDARTSRARPRPMSRDKAKWPYDHFTKLAQAGMVITNHQARFNSVA
MILPKKDTYRMLVDYHA
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