prot_H-paniculata_contig300.8149.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig300.8149.1
Unique Nameprot_H-paniculata_contig300.8149.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length993
Homology
BLAST of mRNA_H-paniculata_contig300.8149.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.410e-93
Identity = 248/527 (47.06%), Postives = 281/527 (53.32%), Query Frame = 0
Query:    1 GRGGCLLASARYSWERRLYDGRMFGG-DGDV---QTEWRNRVWRERSHQRRGSRDRALRALLAEAQGEGECPVWGPKEDPLDAIRLTATWHGLGGTCPLPHAPLELLGDSAE----GDNNFDWSAAVSWEQRRTRGVGSDGRGGSLGFKLRLLLAAYVHCLALGGDLLMADICSAGPEVGESS-RERARHIGAVLGPDTRQLVAIMRTLPT-STGADRGSALGHHAAD--DAVGTARYLLTPRRL-----PLKYDGGGGAGGPWNSTVGHSNSRQKSGASGPGDNDDAHDEGNRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVPPSLASLPPLSVLPLSSSSPSPSSLASPAVTSAFPTVAGQMKGKQNNDKSARGLRRQTQENIEAPLDPGANPAHDDSRPPASVPHGTVPWLWVPRGGAPACRLVSQVAMEAARLGAYGVCLGDLADFWKAFVQEVRFLWEEGSSIPRMDPEPPVDGYSMYDPRCTGQDAALTAMFRRYIT-TPPQPPS 509
            G GG L ASARY+WERRLYDGR+ GG DG+    Q EWR    RERSH  RG+R+ A+RALLA A+GE   P WGP+ DPLD +RL+A W GLGG  PLPH PLELL D+      G +   W A+VSWE   T  + +    GSLG KLRLLLA YVHCLALGGDLLMADICSA  E   SS RERARHIGAVLGP TR+L+A M T P    G   G   G   AD  D V +ARYLLTPRR        K+ GGGG+                  A  PG  D    +GN +XXXXXXXXXXXXXXXXX                                                                              RG                                   PWLWVPRGGAPACRLVSQ+A+EAAR GA GVCLGD+A FWK+FVQE+RFLWEE +S+P+MDPEPPVDG SMYD R TGQ A L+   RR I  +PP  P+
Sbjct:  296 GYGGLLEASARYTWERRLYDGRVLGGEDGEDDLRQNEWRAGFLRERSHLCRGTRECAVRALLASARGEHGIPAWGPEGDPLDGVRLSAVWRGLGGDRPLPHTPLELLRDNLSPPGGGSSLSQWEASVSWE---TASLSA----GSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGDGESGGGTHGDDRADPADIVHSARYLLTPRRSRPSRSAQKHGGGGGS------------------AMAPGGGDVG--DGNGAXXXXXXXXXXXXXXXXXE-----------------------------------------------------------------------------RGS----------------------------------PWLWVPRGGAPACRLVSQLALEAARFGAEGVCLGDVAAFWKSFVQELRFLWEESASVPQMDPEPPVDGLSMYDLRITGQRAGLSERLRRNILRSPPATPA 684          
BLAST of mRNA_H-paniculata_contig300.8149.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 3.990e-92
Identity = 228/527 (43.26%), Postives = 262/527 (49.72%), Query Frame = 0
Query:    1 GRGGCLLASARYSWERRLYDGRMFGG-DGDV---QTEWRNRVWRERSHQRRGSRDRALRALLAEAQGEGECPVWGPKEDPLDAIRLTATWHGLGGTCPLPHAPLELLGD--SAEGDNNF--DWSAAVSWEQRRTRGVGSDGRGGSLGFKLRLLLAAYVHCLALGGDLLMADICSAGPEVGESS-RERARHIGAVLGPDTRQLVAIMRTLPTSTGADRGSAL-GHHAAD--DAVGTARYLLTPRRL-----PLKYDGGGGAGGPWNSTVGHSNSRQKSGASGPGDNDDAHDEGNRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVPPSLASLPPLSVLPLSSSSPSPSSLASPAVTSAFPTVAGQMKGKQNNDKSARGLRRQTQENIEAPLDPGANPAHDDSRPPASVPHGTVPWLWVPRGGAPACRLVSQVAMEAARLGAYGVCLGDLADFWKAFVQEVRFLWEEGSSIPRMDPEPPVDGYSMYDPRCTGQDAALTAMFRRYITT-PPQPPS 509
            G GG L ASARY+WERRL+DGR+ GG DG+    QTEWR    RERSH  RG+R+ A+R LLA A+GE   P WGP+ DPLD +RL+A W GLGG  PLPHAPLELL D  S  G ++    W A+VSWE   T  + +    GSLG KLRLLLA YVHCLALGGDLLMADICSA  E   SS RERARHIGAVLGP TR+L+A M T P     + G    G   AD  D V +ARYLLTPRR        K+ GGGG+                                                                                                            V +A     G   G +                        A                  PWLWVPRGGAPACRLVSQ+A+EAAR GA GVCLGD+A FWK+FVQE+RFLWEE +S+P+MDPEPPVDG SMYD R TGQ A L+   RR I   PP  P+
Sbjct:  297 GYGGRLEASARYTWERRLFDGRVLGGEDGEDDLRQTEWRAGFLRERSHLCRGTRECAVRTLLASARGEHGIPAWGPEGDPLDGVRLSAVWRGLGGDRPLPHAPLELLCDYLSPPGGSSSLSQWEASVSWE---TTSLSA----GSLGLKLRLLLAVYVHCLALGGDLLMADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPRRGDGESGDGTDGDDRADPADIVHSARYLLTPRRSRPSRSAEKHGGGGGS------------------------------------------------------------------------------------------------------------VVAAEGGEVGDGSGAEK-----------------------AXXXXXXXXXXXXXXXXXSPWLWVPRGGAPACRLVSQLALEAARFGAEGVCLGDVAAFWKSFVQELRFLWEESASVPQMDPEPPVDGLSMYDLRITGQRAGLSERLRRNILQRPPATPA 685          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig300.8149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3A9_9PHAE6.410e-9347.06Rab3 GTPase-activating protein catalytic subunit n... [more]
D7FXM6_ECTSI3.990e-9243.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026147Rab3 GTPase-activating protein catalytic subunitPANTHERPTHR21422FAMILY NOT NAMEDcoord: 365..660

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig300contigH-paniculata_contig300:16465..30036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig300.8149.1mRNA_H-paniculata_contig300.8149.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig300 16465..30036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig300.8149.1 ID=prot_H-paniculata_contig300.8149.1|Name=mRNA_H-paniculata_contig300.8149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=993bp
GRGGCLLASARYSWERRLYDGRMFGGDGDVQTEWRNRVWRERSHQRRGSR
DRALRALLAEAQGEGECPVWGPKEDPLDAIRLTATWHGLGGTCPLPHAPL
ELLGDSAEGDNNFDWSAAVSWEQRRTRGVGSDGRGGSLGFKLRLLLAAYV
HCLALGGDLLMADICSAGPEVGESSRERARHIGAVLGPDTRQLVAIMRTL
PTSTGADRGSALGHHAADDAVGTARYLLTPRRLPLKYDGGGGAGGPWNST
VGHSNSRQKSGASGPGDNDDAHDEGNRSQSSSSLLSLSPPMDAATTTATA
TVAQQYGKPHPHNQQQQQQQRVPPSLASLPPLSVLPLSSSSPSPSSLASP
AVTSAFPTVAGQMKGKQNNDKSARGLRRQTQENIEAPLDPGANPAHDDSR
PPASVPHGTVPWLWVPRGGAPACRLVSQVAMEAARLGAYGVCLGDLADFW
KAFVQEVRFLWEEGSSIPRMDPEPPVDGYSMYDPRCTGQDAALTAMFRRY
ITTPPQPPSNKQPRDERRSRDMGVEANDNPAVANAKQKRISKEKERTSHE
HGPPPSAESFSKFPTAMVDVCGSGGGGGDDLGHSSPRRGSGLRENGSAPR
YSGPGQQGTGARGGNRMAVPQPDMRTCLLHQKLQMLNCCLAEQNRCRSSI
PGESLSSLSSPRPPPSALPPSPSPPPTDKSNTAPPGASPSSIMSRIVAEN
GPDSDLATTSPGSGIFLGAGGQDTSVTSSSAEVPSLSDDPAGKGSNAADG
GSGSSGGGGREDDSIVKDNISDSFEKSRDRRKAAQLKARFASERDAILRR
VGVRKQDGRNGNISSSSSSSKGNNRAPTENGTTADADAHGKAAAAGDGRA
TVGGRKRRWRPDRPRRKAEPMASSPAYDDEPLPPSPRPRGLMEEFPRIRK
NGRSNNRSASSPDKSSGGGGSGDLDLGSRRQLGNRDIHAARSEAKLSEGD
GEPGRSSSITEIIPDSGDGGDIRYDGAEVREGIGGRRGGRDEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026147Rab3-GAP_cat_su