prot_H-paniculata_contig11271.813.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11271.813.1
Unique Nameprot_H-paniculata_contig11271.813.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length601
Homology
BLAST of mRNA_H-paniculata_contig11271.813.1 vs. uniprot
Match: D7G608_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G608_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.650e-14
Identity = 113/402 (28.11%), Postives = 163/402 (40.55%), Query Frame = 0
Query:  195 GSGGRRRSA-PPTADKMPWPISMLYGSQLYVSDGERGDTHAGEPVMEWPVDLSLVDSVAQLLVATSAFNAIQTAVPSLHHAPSSLHSDPDKQGKTGVRVVEMPIEAATLFWAVGPVFQEVRMETSGLLHEISSDTHMVELLMRRNYLDTLLTVGVPGQQGPAQVSYRNTVDAFINANIFRQRQDTVERRACSTVSNIVDGFKRRHPVTEMKNMVTKNWNEIAPGKLLDDLDDPTFEGGSETTPEPLGEQDRLYVDQVVEMNRLLTQPHIFMGDRQELRNSAFETAI---VGFIWGYLRRRVAWIRSGEKFAVAKNGRVLQAAVVSSNGALRAACGSLALSLL---AGYRFYLRDQTLDREKGRHGTVVMSCARAALDLGVLYAVLRACPYSLLPVIAVNSLV 589
            GSGGR   A     D++PWP   LYG   Y  +G  G  H G        D ++  SV    V +  +   +  V  +     S  S  D +G           E A L    G V +     +   L EIS  + +V LL+RR  L  L+ V        AQ S   T++     N +R+               + +  + +    E+   V K   +   G    DLD                E D+ +V Q  E + L   P+  +     L N    T +   +G  WG  RR +AW R+GE F+      + +A +++    LRA  G+ AL      AG+R   R   LD   G  GT+ MS AR   +L  LYA+LR CPYSLLP + V+++V
Sbjct:  115 GSGGRTAVAGEDEEDEVPWPFRFLYGENNY--EGAAGYAHDGGN----EDDDTITPSVGG--VVSGPWPLDRKLVADIAELMLSAASARDSEGAVARG------EDAEL----GEVLEAAAASS---LREISHHSELVGLLLRRRPLVGLVAVSQDSMMA-AQASSEATLNI---CNAYRR------------CHGLPEASEPKASYDEVITWVNKTLAQEWAGSPSGDLD--------------TSEADQAFVRQA-ERSTLPPSPYSSV-----LINMQMSTGVGMALGVPWGAARRWIAWRRAGETFSALSRLSLPRALLLAG---LRAGLGTTALVATHGPAGFRPQARPWILDATSGSRGTLAMSAAREVSELAYLYAILRLCPYSLLPSLVVSAVV 456          
BLAST of mRNA_H-paniculata_contig11271.813.1 vs. uniprot
Match: A0A6H5JGV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV5_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.520e-13
Identity = 106/398 (26.63%), Postives = 155/398 (38.94%), Query Frame = 0
Query:  196 SGGRRRSAPPTADKMPWPISMLYGSQLYVSDGERGDTHAGEPVMEWPVDLSLVDSVAQLLVATSAFNAIQTAVPSLHHAPSSLHSDPDKQGKTGVRVVEMPIEAATLFWAVGPVFQEVRMETSGLLHEISSDTHMVELLMRRNYLDTLLTVGVPGQQGPAQVSYRNTVDAFINANIFRQRQDTVERRACSTVSNIVDGFKRRHPVTEMKNMVTKNWNEIAPGKLLDDLDDPTFEGGSETTPEPLGEQDRLYVDQVVEMNRLLTQPHIFMGDRQELRNSAFETAIVGFIWGYLRRRVAWIRSGEKFAVAKNGRVLQAAVVSSNGALRAACGSLALSLL---AGYRFYLRDQTLDREKGRHGTVVMSCARAALDLGVLYAVLRACPYSLLPVIAVNSLVG 590
            SGGR  +     D++PWP   LYG   Y  +G  G  + G    +  +  S+   ++        +   +  V  +     S  S  D +G           E A L    G V +      S LL EIS    +V LL+RR  L  L+ V        AQ S   T++     N +R+     E          +        +T +   + + W E   G L     D  F   +E +  P      + +++++                     SA     +GF WG  RR +AW R+GE F+V     +     V     LRA  G+ AL      AG+R       LD   G  GT+ MS AR   +L  LYA+LR CPYSLLP + V+++VG
Sbjct:  330 SGGRTAAGEDEEDEVPWPFRFLYGENNY--EGAAGYAYGGGNEDDDTIIASVGGGIS------GPWPLDRKLVADIAELMLSAASARDSEGAVARG------EDAEL----GEVLEAAA--ASSLL-EISHHPELVGLLLRRRPLAGLVAVSQDSMMA-AQTSSEATLNI---CNAYRRCHGLPEASEPKASYEEI--------ITWVNKTLAQEWAESPSGDLDTSEADQAFVRQAERSTLPPLPYSSVLINEIM---------------------SAGVGMALGFPWGAARRWIAWRRAGETFSVLSTCSLPW---VLLRAGLRAGLGATALVATHGPAGFRPQASSWILDATSGSRGTLAMSAARELSELAYLYAILRLCPYSLLPSLVVSAVVG 670          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11271.813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G608_ECTSI4.650e-1428.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGV5_9PHAE2.520e-1326.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 519..538
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..518
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 539..600

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11271contigH-paniculata_contig11271:1078..7808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11271.813.1mRNA_H-paniculata_contig11271.813.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11271 308..7941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11271.813.1 ID=prot_H-paniculata_contig11271.813.1|Name=mRNA_H-paniculata_contig11271.813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=601bp
MSLSFNFPTAALMARDPEIRQELVKEARRRTQLAMDAAAHRHELMTDTAR
SIAELSEADKARGAQHTVEKETGPSLSTETRGLGSRSISVRGGRRHSPVK
LPPENSAAQNDMDNGGDRTDMMSDSQGRSAESGNVDVHDDGAEGAHNSTE
EMLFMSGDELKGTMLNACNALRALRNVLGASRLSLSEAGSSATDGSGGRR
RSAPPTADKMPWPISMLYGSQLYVSDGERGDTHAGEPVMEWPVDLSLVDS
VAQLLVATSAFNAIQTAVPSLHHAPSSLHSDPDKQGKTGVRVVEMPIEAA
TLFWAVGPVFQEVRMETSGLLHEISSDTHMVELLMRRNYLDTLLTVGVPG
QQGPAQVSYRNTVDAFINANIFRQRQDTVERRACSTVSNIVDGFKRRHPV
TEMKNMVTKNWNEIAPGKLLDDLDDPTFEGGSETTPEPLGEQDRLYVDQV
VEMNRLLTQPHIFMGDRQELRNSAFETAIVGFIWGYLRRRVAWIRSGEKF
AVAKNGRVLQAAVVSSNGALRAACGSLALSLLAGYRFYLRDQTLDREKGR
HGTVVMSCARAALDLGVLYAVLRACPYSLLPVIAVNSLVGGLEIEMGNVE
*
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