mRNA_H-paniculata_contig29984.8135.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: A0A6H5JIN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN4_9PHAE) HSP 1 Score: 136 bits (343), Expect = 6.170e-40 Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADV 246
RILVPE TDQ+LWI+I+GAFGAFFAAFGIGANDVANAFATSVGAKA+T++QAV A IFEFLGA+ LGSHVT TIRS IADV
Sbjct: 9 RILVPETTDQFLWILIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVILAGIFEFLGAVFLGSHVTKTIRSGIADV 90
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: D7G5U7_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U7_ECTSI) HSP 1 Score: 132 bits (332), Expect = 3.100e-37 Identity = 64/82 (78.05%), Postives = 73/82 (89.02%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADV 246
RIL PEATDQ+LWI+I+ AFGAFFAAFGIGANDVANAFATSVGAKA+T++QAV A +FEFLGA+ LGSHVT TIR IAD+
Sbjct: 34 RILAPEATDQFLWILIVAAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGVFEFLGAVFLGSHVTKTIRKGIADI 115
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: D8LJQ3_ECTSI (Pho4 high affinity phosphate transporter, probable (IC) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ3_ECTSI) HSP 1 Score: 123 bits (309), Expect = 5.470e-35 Identity = 57/81 (70.37%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIAD 243
R+L PEA+DQWLWIV++GAFG+F AAFGIGANDVANAF+TSVGA+A+TL+QA+ A +FEFLGALLLG+ VT IR I +
Sbjct: 8 RMLAPEASDQWLWIVVVGAFGSFLAAFGIGANDVANAFSTSVGARAVTLKQAIVLAGVFEFLGALLLGAPVTKAIRENIVN 88
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 133 bits (335), Expect = 5.690e-35 Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADV 246
RIL PE TDQWLWI+I+ +FGAFFAAFGIGANDVANAFATSVGAKA+T++QAV AAIFEF GA+ LGSHVT TIR IAD+
Sbjct: 8 RILAPETTDQWLWILIVASFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAAIFEFAGAVFLGSHVTKTIRKGIADI 89
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 133 bits (334), Expect = 8.000e-35 Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIAD 243
RIL PE TD +LWIVI+GAFGAFFAAFGIGANDVANAFATSVGAKA+T++QAV A IFEFLGA+ LGSHVT TIRS IAD
Sbjct: 9 RILAPETTDHFLWIVIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGIFEFLGAVFLGSHVTKTIRSGIAD 89
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 128 bits (321), Expect = 5.790e-33 Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADV 246
RIL P+ T+ +LWI+I+G FGAFFAAFGIGANDVANAFATSVGAKA+TLRQAV A IFEFLGA+ LGSHVT TIRS AD+
Sbjct: 9 RILAPDTTNGFLWILIVGTFGAFFAAFGIGANDVANAFATSVGAKALTLRQAVVLAGIFEFLGAVFLGSHVTSTIRSGTADI 90
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.520e-28 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIAD 243
RIL P T ++LWIVI+ + GA FAAFGIGAND+ANAFATSVGA+A+T++QAV A +FEFLGA+ LGSHV TIRS IAD
Sbjct: 9 RILAPAVTSEFLWIVIVSSIGAVFAAFGIGANDLANAFATSVGARALTIKQAVVLAGVFEFLGAVFLGSHVAKTIRSGIAD 89
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: A0A6U1NDP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDP7_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.770e-27 Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 25 DQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADV 246
D +LWIVI+G F A F A+GIGANDVANAF+TSVGAK +TL+QAV IFEFLGA L GSHVT TIR IADV
Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGIADV 80
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: A0A382CG81_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CG81_9ZZZZ) HSP 1 Score: 105 bits (261), Expect = 8.250e-27 Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 10 VPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADVS 249
+ E TD +LWI IL F +FF ++GIGAND AN+FATSVGAK +TLRQAV AAIFEF GA L+GSHVTDT+R KI D S
Sbjct: 8 IMELTD-YLWIPILCTFASFFTSWGIGANDCANSFATSVGAKVLTLRQAVLVAAIFEFTGAFLMGSHVTDTVRKKIVDNS 86
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Match: D8LJQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ0_ECTSI) HSP 1 Score: 101 bits (252), Expect = 4.400e-26 Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRQAVAFAAIFEFLGALLLGSHVTDTIRSKIADVSA 252
R+L PEAT QWLWIV + + GA AA GIGANDVAN+FATSVG+KA+TL++A+ A I EF GALLLG I IAD A
Sbjct: 9 RVLAPEATGQWLWIVSVASLGALCAALGIGANDVANSFATSVGSKALTLKKALLLAGICEFFGALLLGRQAMTAISESIADDEA 92 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29984.8135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29984.8135.1 >prot_H-paniculata_contig29984.8135.1 ID=prot_H-paniculata_contig29984.8135.1|Name=mRNA_H-paniculata_contig29984.8135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp RILVPEATDQWLWIVILGAFGAFFAAFGIGANDVANAFATSVGAKAITLRback to top mRNA from alignment at H-paniculata_contig29984:82..348- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29984.8135.1 ID=mRNA_H-paniculata_contig29984.8135.1|Name=mRNA_H-paniculata_contig29984.8135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=267bp|location=Sequence derived from alignment at H-paniculata_contig29984:82..348- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29984:82..348- >mRNA_H-paniculata_contig29984.8135.1 ID=mRNA_H-paniculata_contig29984.8135.1|Name=mRNA_H-paniculata_contig29984.8135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at H-paniculata_contig29984:82..348- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |