prot_H-paniculata_contig2969.8068.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: A0A6H5KKW4_9PHAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW4_9PHAE) HSP 1 Score: 374 bits (959), Expect = 4.610e-128 Identity = 191/241 (79.25%), Postives = 205/241 (85.06%), Query Frame = 0
Query: 1 MEFPGAPEDPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEAKALQEAAESAXXXXXXXXXVVSEEDQNIASALKLSVDNILMGLVEKHIDGDGGG-------SRGVKRKA 234
MEFPGA EDPE SFIDPVWLQQWGLGP+NALDYFALSPFYDK+CNNEQCRMQ VDPREGL NLTGLEFML +LP EMSFL PGQP P GPQPRRLFVIKKQ+RKSPSSVEVQAIYYIMEG IYQAPTVQKLIKSRL+KFTHHLNNAFVELSKLA+L SGGGYDWAWQKEAK LQE AE+A V+EED++ +ALKLS+DNILMGLVEK+IDGDG G +RG KRKA
Sbjct: 1 MEFPGAAEDPEQRSFIDPVWLQQWGLGPQNALDYFALSPFYDKACNNEQCRMQSVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVG------VAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKEPAARGAKRKA 235
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: D7G6X0_ECTSI (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X0_ECTSI) HSP 1 Score: 278 bits (712), Expect = 2.350e-92 Identity = 134/150 (89.33%), Postives = 139/150 (92.67%), Query Frame = 0
Query: 1 MEFPGAPEDPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVE 150
M+FPGA EDPE SFIDPVWLQQWGLGPENALDYFALSPFYDK+CNNEQCRMQGVDPREGL NLTGLEFML +LP EMSFL PGQP P GPQPRRLFVIKKQ+RKSPSSVEVQAIYYIMEG IYQAPTVQKLIKSRL+KFTHHLNNAF E
Sbjct: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFGE 150
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: A0A835YVL9_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL9_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.580e-46 Identity = 105/221 (47.51%), Postives = 135/221 (61.09%), Query Frame = 0
Query: 8 EDPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGV-DPREGLKNLTGLEFMLEDLPQEMSFLA-PGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEAKALQEAAESAXXXXXXXXXVVSEEDQNIASALKLSVDNILMGLVEKHIDGDGGG 226
ED +SF D +WL+ + LGPE A+DYFALSPFYD++ NNE CRMQG+ D ++ +TG+E+++E+LP E L PG P PQPR L VIKKQ RKS + EV+ +YYIM+G IYQAP+ LI SRL K L+ +F L L NA G YDW W EA XXXXXXXXX + Q SA++ D IL+ LV ++ +G G
Sbjct: 16 EDQTQLSFQDTMWLRSFYLGPETAIDYFALSPFYDRTSNNELCRMQGLTDHVAAMQTMTGIEYVVEELPPETDELPEPGAP----PQPRHLMVIKKQYRKSKTQAEVRGVYYIMDGTIYQAPSALALITSRLQKAAFMLSESFAALRALPAHNARGA-YDWPWNAEAXXXX-----XXXXXXXXXXXXXXQSQAALSAVRAGADAILLQLVSRYARSEGEG 226
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: M4C4K5_HYAAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4K5_HYAAE) HSP 1 Score: 126 bits (316), Expect = 2.060e-31 Identity = 81/219 (36.99%), Postives = 120/219 (54.79%), Query Frame = 0
Query: 6 APEDPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEAKALQEA---AESAXXXXXXXXXVVSEEDQNIASALKLSVDNILMGLVEKH 219
A D SF D VWLQ + L P+ L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L LP L P++L+VI+KQ R S + VE A+YY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +K +E +E + ++ +N A VD+IL+ L++KH
Sbjct: 5 AHADDYNASFRDTVWLQSFPLNPQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGIEYEL--LPNAAKQL-----------PQQLYVIRKQRRSSRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLAAGVRFSPTEG---YAWDFSSKDKKEPVIPSEQLQLKLKQKYEKMEKQRENSAR-----VDSILIQLMKKH 199
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: A0A2R5GW25_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW25_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.520e-30 Identity = 75/172 (43.60%), Postives = 104/172 (60.47%), Query Frame = 0
Query: 13 ISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLEDLPQEMSF-LAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEA-KALQEAAESA 182
+SF+D W++ +GL N LDYFA SPFYD SCNNE RMQ + GLE ML D+P + + L P PV LF++ KQ R S + V QA+YYI++ IYQAP++Q+LI +RL K T+HL NAF ++ K A A G+ W + +A +A +++AE A
Sbjct: 64 VSFLDDNWIRAFGLSAHNVLDYFACSPFYDTSCNNEILRMQNL----------GLE-MLADMPPGIEYRLLPSGHEPV------LFIVVKQERASKTVVRRQALYYILDKVIYQAPSLQRLIATRLSKSTNHLQNAFDQMVKAARY-APSQGFTWHFDGDAHRAWRQSAEGA 217
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: D0NQQ4_PHYIT (Mediator of RNA polymerase II transcription subunit 6 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NQQ4_PHYIT) HSP 1 Score: 121 bits (303), Expect = 1.210e-29 Identity = 77/216 (35.65%), Postives = 115/216 (53.24%), Query Frame = 0
Query: 9 DPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEAKALQEA---AESAXXXXXXXXXVVSEEDQNIASALKLSVDNILMGLVEKH 219
D SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L P P++LF+I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +K +E +E + ++ +N A VD+IL+ L++KH
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYEL-------------LPNTAKQMPQQLFIIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG---YAWDFSSKDKKEPVIPSEQLQLKLKQKYEKMEKQRENSAR-----VDSILIQLMKKH 199
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: A0A8K1CUM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUM6_PYTOL) HSP 1 Score: 120 bits (300), Expect = 4.660e-29 Identity = 77/214 (35.98%), Postives = 116/214 (54.21%), Query Frame = 0
Query: 9 DPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEA-KALQEAAESAXXXXXXXXXVVSEEDQNIASALKLSVDNILMGLVEKH 219
D SF D +WLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKN+ G+E+ L LP L P++LF+I+KQ R + V+ A+YY+++G +YQAP + ++ SRL K +H +N AF L+ + + G Y W + E KA +E + ++ +N A VD+IL+ L++KH
Sbjct: 8 DDYNASFHDTIWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNMRGIEYEL--LPNAAKQL-----------PQQLFLIQKQRRLGRTQVKPLAVYYVLDGRVYQAPNIHAMLTSRLKKCSHRVNKAFHALAAGVRFSPTEG-YAWDFSSEDNKAPVIPSEQLQLKLKQKFEKMEKQRENSAR-----VDSILIRLMKKH 199
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: A0A484EGT8_BRELC (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT8_BRELC) HSP 1 Score: 115 bits (289), Expect = 2.700e-28 Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = 0
Query: 9 DPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQGVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDW 166
D SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ + E LKNL G+E+ L LP L P++L++I+KQ R + VE A+YY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G Y W
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LEQLKNLRGVEYEL--LPNAAKQL-----------PQQLYIIRKQRRNGRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG-YAW 150
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: K3WSB9_GLOUD (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSB9_GLOUD) HSP 1 Score: 117 bits (294), Expect = 4.060e-28 Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 0
Query: 9 DPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELSKLAELNASGGGYDWAWQKEAKALQEA---AESAXXXXXXXXXVVSEEDQNIASALKLSVDNILMGLVEKH 219
D SF D +WLQ + L + + YFALSPFYD+SCNNE+ +MQ G+D LKN+ G+E+ E LP L P++LF+I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +K +E +E + ++ ++ A VD+IL+ L++KH
Sbjct: 8 DDYNASFRDTMWLQSFPLNAQTVIHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNMRGIEY--EVLPNTAKQL-----------PQQLFLIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHTLAAGVRFSPTEG---YAWDFSSKDKKEPIIPSEQLQLKLKQKYEKIEKQREHSAR-----VDSILIQLMKKH 199
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Match: A0A0N7L744_PLAHL (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L744_PLAHL) HSP 1 Score: 114 bits (285), Expect = 6.430e-28 Identity = 66/154 (42.86%), Postives = 92/154 (59.74%), Query Frame = 0
Query: 1 MEFPGAPEDPETISFIDPVWLQQWGLGPENALDYFALSPFYDKSCNNEQCRMQ--GVDPREGLKNLTGLEFMLEDLPQEMSFLAPGQPTPVGPQPRRLFVIKKQMRKSPSSVEVQAIYYIMEGNIYQAPTVQKLIKSRLDKFTHHLNNAFVELS 152
ME G +D SF D VWLQ + L + L YFALSPFYD+SCNNE+ +MQ G+D LKNL G+E+ L LP L P++L++I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+
Sbjct: 1 MEVAGHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYEL--LPNAAKQL-----------PQQLYIIRKQRRNGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLA 137 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2969.8068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2969.8068.1 ID=prot_H-paniculata_contig2969.8068.1|Name=mRNA_H-paniculata_contig2969.8068.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bpback to top |