prot_H-paniculata_contig2969.8067.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2969.8067.1
Unique Nameprot_H-paniculata_contig2969.8067.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: D7G6W9_ECTSI (60S ribosomal protein L13a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W9_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 9.570e-126
Identity = 180/198 (90.91%), Postives = 191/198 (96.46%), Query Frame = 0
Query:    1 MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFGF 198
            MF+AP  VDGRGHLLGRLASVVAKELL GQKVV+VRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGP+HFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYD KKRMVVPNALQVIRM PGRRFCVLGRLSEEVGWPH++LIKRLEAQRKIKSEAYYV+KK+AKQ+KDKA AEA+ +AVAPVLEE+GF
Sbjct:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A835Z9N1_9STRA (60S ribosomal protein L13a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N1_9STRA)

HSP 1 Score: 286 bits (731), Expect = 7.190e-96
Identity = 139/197 (70.56%), Postives = 168/197 (85.28%), Query Frame = 0
Query:    1 MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFG 197
            + + P VVDGRGHLLGRLAS+VAK+LL GQKV++VR EQI ISGSLVRNKVKY Q++KKR NTNP RGPFHFRSPARIFWRT+RGM+P KT RG+ A+ARL  FEGIPAP+D +KRMVVP AL+V+R+ PGR+ CVLGRLS EVGW H DL++RLEA+RK++SEA+Y +KK+  Q++ KAEA AD SAV PVLE +G
Sbjct:    2 VLEKPVVVDGRGHLLGRLASIVAKQLLSGQKVIVVRAEQIVISGSLVRNKVKYAQFRKKRMNTNPARGPFHFRSPARIFWRTIRGMIPHKTHRGQLAMARLKAFEGIPAPFDKQKRMVVPAALKVLRLAPGRKHCVLGRLSTEVGWRHGDLVERLEAKRKVRSEAFYQKKKANAQLRVKAEAAADLSAVTPVLESYG 198          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: W7TSL6_9STRA (60s ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.100e-86
Identity = 133/200 (66.50%), Postives = 162/200 (81.00%), Query Frame = 0
Query:    2 FDAPTVV-DGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEA--DFSAVAPVLEEFGF 198
            FD+  VV DGRGHLLGRL+S+VAKELL GQKVV+VRCE++ ISG LVRN  +YMQ+ +KR NTNPKRGPFH+R+P+RI WRT+RGMLP KT RG +ALARL+ FEGIPAPYDTKKR+VVP AL+++R+ PGRRFC L RL+ EVGW H DL+ RLEA+RKIK+EAYY +KK+    K  AE +A  + SAV  VL  FG+
Sbjct:    3 FDSKEVVIDGRGHLLGRLSSIVAKELLSGQKVVVVRCEELMISGGLVRNHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSAVNNVLAGFGY 202          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A5J4Z3W8_PORPP (60S ribosomal protein L13a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W8_PORPP)

HSP 1 Score: 259 bits (661), Expect = 3.120e-85
Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 0
Query:    1 MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFG 197
            M+++  VVD R HLLGRLAS+VAKELLCGQKVV+ RCE I +SG  +R K KY+ + +KR NTNP RGPFHFR+P+RIFWRTVRGMLP KT RG+EAL RL  FEGIP PYD  KRMVVP+AL+V+R+ P R+ CVLGRLS EVGW + D++ RLE +RK+ S AYY  KK+  ++K KA   AD S V PVLE FG
Sbjct:    1 MYESVVVVDARAHLLGRLASIVAKELLCGQKVVVTRCEAIEMSGRFIRKKNKYLMFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTERGQEALGRLKVFEGIPPPYDKMKRMVVPDALRVVRLAPRRKHCVLGRLSHEVGWKYQDVLARLETKRKVHSAAYYQRKKALDKLKRKATESADLSKVTPVLEAFG 197          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A7S1TQI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQI9_9STRA)

HSP 1 Score: 259 bits (661), Expect = 3.230e-85
Identity = 125/193 (64.77%), Postives = 158/193 (81.87%), Query Frame = 0
Query:    6 TVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFGF 198
            T++D RGHLLGRLAS++AKELLCGQKV +VRCE+I ++GSL+RNKVK+  Y++KRH TNPK+GP H+RSPAR+ WR VRGMLP KTARG+ ALARL+ FEGIPAPYD KKR+VVP AL+V+R+ PGR+F VL  L+ EVGW H DLI+RLE +RK++++A+Y +KK+A   K  A A  D SAV PVLE  G+
Sbjct:    7 TLIDARGHLLGRLASIIAKELLCGQKVTVVRCEEICVTGSLLRNKVKWANYRRKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 199          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: F0Y3B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B4_AURAN)

HSP 1 Score: 258 bits (659), Expect = 6.510e-85
Identity = 127/197 (64.47%), Postives = 153/197 (77.66%), Query Frame = 0
Query:    1 MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFG 197
            +F    +VDGR H+LGRLAS++AKELLCGQKVV+VRCEQ+ +SGSLVRNKVK+  + KKR NTNPKRGP H+RSPAR+ WRTVRGMLP KT RG++ALARL CFEG+P PYD  K+MVVP AL+V+R+ PGRRF VL RL+ E GW H  LI ++E +R  +S  +Y  KKSA  +K KA A AD S VA VLE FG
Sbjct:    2 VFQDSVLVDGRTHMLGRLASIIAKELLCGQKVVVVRCEQLCVSGSLVRNKVKFTAFLKKRTNTNPKRGPIHYRSPARMLWRTVRGMLPHKTHRGQQALARLQCFEGVPPPYDKMKKMVVPEALKVLRLKPGRRFTVLARLASEFGWKHEALIAKMEEKRVARSAEFYAAKKSATALKAKATAAADLSKVADVLEAFG 198          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A7S0LS12_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS12_9EUKA)

HSP 1 Score: 256 bits (655), Expect = 2.230e-84
Identity = 125/182 (68.68%), Postives = 150/182 (82.42%), Query Frame = 0
Query:    7 VVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSA 188
            V+DG+GHLLGRL S++AK+LL G+KVV+VRCE + ISGSL RNKVKY Q+ KKR NTNP RGPFHFRSPARIFWRT+RGMLP KT RG+ ALARL+CFEGIP PYD KKR+VVP+AL+ +R+   R F VLG LS+EVGW ++DL+ +LEAQRKIK +AYY EKK+   +K KA A AD SA
Sbjct:   13 VIDGKGHLLGRLCSIIAKQLLFGKKVVVVRCEALIISGSLTRNKVKYAQFMKKRMNTNPNRGPFHFRSPARIFWRTLRGMLPHKTVRGQSALARLACFEGIPEPYDKKKRVVVPSALKSLRLRADRNFTVLGELSKEVGWGYTDLVAKLEAQRKIKEQAYYAEKKAQVALKSKAAASADLSA 194          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A6V1NQ00_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQ00_HETAK)

HSP 1 Score: 254 bits (650), Expect = 1.470e-83
Identity = 129/197 (65.48%), Postives = 157/197 (79.70%), Query Frame = 0
Query:    1 MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFG 197
            MF+   VVDGRGHLLGRLAS+VAK+LLCGQKVV+VR E+I +SGSL+R K ++ Q+ KKR NTNPKRGP HFRSPA+IFWRTVRGM+P KT RG  A+ARL CFEGIP P+D KKRMVVP AL+V+R+   R+   LG L+ EVGW  + LI+RLEA+RKI+S+AYY++KK+A  +K KA AEAD S VA VL   G
Sbjct:    1 MFEDTVVVDGRGHLLGRLASIVAKQLLCGQKVVLVRAEEIVMSGSLIRKKTQFAQWLKKRTNTNPKRGPIHFRSPAKIFWRTVRGMIPHKTVRGTAAMARLQCFEGIPHPWDKKKRMVVPEALKVLRLKAHRKNTKLGTLAGEVGWEKAGLIERLEAKRKIRSQAYYLKKKAAVVLKTKAAAEADLSPVAAVLAPLG 197          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A7S3H512_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H512_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.710e-82
Identity = 125/192 (65.10%), Postives = 153/192 (79.69%), Query Frame = 0
Query:    7 VVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFGF 198
            V+DG+GHLLGRLASVVAK+LL G+KVV+VR E + ISGSL RNK+KY Q+ KKR NTNP+RGPFHFRSPARIFWRT+RGMLP KT +G+ AL RL+ FEGIP PYD KKR+VVP+AL+ +R+   R F VLG LS+EVGW ++DL+ +LEAQRKIK +AYY EKK+   +K KA A AD S V  +L   G+
Sbjct:    6 VIDGKGHLLGRLASVVAKQLLFGKKVVVVRTEALLISGSLTRNKIKYAQFIKKRMNTNPRRGPFHFRSPARIFWRTLRGMLPHKTVKGQLALGRLAAFEGIPEPYDKKKRVVVPSALKSLRLRADRNFTVLGELSKEVGWGYTDLVAKLEAQRKIKEQAYYAEKKAQIALKSKATASADLSPVNAILAPLGY 197          
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Match: A0A7S1TDT8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDT8_9RHOD)

HSP 1 Score: 249 bits (637), Expect = 1.400e-81
Identity = 121/198 (61.11%), Postives = 155/198 (78.28%), Query Frame = 0
Query:    1 MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSDLIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFGF 198
            MF  P VVDGRGHLLGRLAS VAKELL GQ+VV+VRCE I  SG  +RNK KY+ + +KR NTNP RGP HFRSP+++FWRTVRGMLP KT RG +ALARL  FEGIPAPYD  KRMVVPNAL+V+R+ P R++C LGR++ EVGW ++D++ RLEA+RK+ SEAYY +KK+  +++ +A+A A    +   L+ +G+
Sbjct:    1 MFSGPVVVDGRGHLLGRLASTVAKELLNGQQVVVVRCEDIDQSGKFIRNKNKYLIFLRKRMNTNPTRGPIHFRSPSKMFWRTVRGMLPHKTQRGADALARLKVFEGIPAPYDKTKRMVVPNALRVLRLRPDRKYCRLGRIASEVGWKYADVVDRLEAKRKVSSEAYYEKKKAEGKLRVQAKANAAIQEMETKLQNYGY 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2969.8067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W9_ECTSI9.570e-12690.9160S ribosomal protein L13a n=2 Tax=Ectocarpus TaxI... [more]
A0A835Z9N1_9STRA7.190e-9670.5660S ribosomal protein L13a n=1 Tax=Tribonema minus... [more]
W7TSL6_9STRA1.100e-8666.5060s ribosomal protein l13a n=1 Tax=Nannochloropsis... [more]
A0A5J4Z3W8_PORPP3.120e-8563.9660S ribosomal protein L13a n=1 Tax=Porphyridium pu... [more]
A0A7S1TQI9_9STRA3.230e-8564.77Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0Y3B4_AURAN6.510e-8564.47Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S0LS12_9EUKA2.230e-8468.68Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A6V1NQ00_HETAK1.470e-8365.48Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3H512_9STRA6.710e-8265.10Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1TDT8_9RHOD1.400e-8161.11Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 8..115
e-value: 4.6E-10
score: 39.8
IPR005822Ribosomal protein L13PIRSFPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 3..156
e-value: 6.9E-42
score: 140.9
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 6..190
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 5..138
score: 19.563
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 2..148
e-value: 1.3E-67
score: 228.3
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 6..147
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 6..146
e-value: 7.3E-54
score: 179.9
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF3RIBOSOMAL PROTEIN L13Acoord: 6..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2969contigH-paniculata_contig2969:1172..4411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2969.8067.1mRNA_H-paniculata_contig2969.8067.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2969 669..4411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2969.8067.1 ID=prot_H-paniculata_contig2969.8067.1|Name=mRNA_H-paniculata_contig2969.8067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MFDAPTVVDGRGHLLGRLASVVAKELLCGQKVVIVRCEQITISGSLVRNK
VKYMQYKKKRHNTNPKRGPFHFRSPARIFWRTVRGMLPRKTARGEEALAR
LSCFEGIPAPYDTKKRMVVPNALQVIRMTPGRRFCVLGRLSEEVGWPHSD
LIKRLEAQRKIKSEAYYVEKKSAKQIKDKAEAEADFSAVAPVLEEFGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR036899Ribosomal_L13_sf
IPR005755Ribosomal_L13_euk/arc