prot_H-paniculata_contig29659.8056.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29659.8056.1
Unique Nameprot_H-paniculata_contig29659.8056.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: D7FL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL55_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.280e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 MTLAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSRENPEVRL 47
            M LA VF HFEAAK +LGLASYAVGQTTLEQIFN+FA +++NPEVRL
Sbjct: 2142 MKLADVFEHFEAAKAKLGLASYAVGQTTLEQIFNSFAVTKDNPEVRL 2188          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A6H5J891_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J891_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.260e-14
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MTLAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSRENPEVRL 47
            M LA VF HFEAAK +LGLASYAVGQTTLEQIFN+ A +++NPEVRL
Sbjct:  493 MKLADVFEHFEAAKAKLGLASYAVGQTTLEQIFNSLAVTKDNPEVRL 539          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A225X1M2_9STRA (ABC transporter n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225X1M2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.670e-9
Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSR-ENPEVRLGAGG 51
            LA VFGH E +K +LG+  YAV QTTLEQIFNNFAG + E   V  G GG
Sbjct: 1675 LATVFGHVEGSKQQLGIREYAVSQTTLEQIFNNFAGQQSEEKGVARGMGG 1724          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A812QND9_SYMMI (ABCA1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QND9_SYMMI)

HSP 1 Score: 57.8 bits (138), Expect = 2.230e-8
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MTLAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSRENPEVRLGAGG 51
            M LA VF +FE  K+ L +  Y+VGQTTLEQIFN FA S++NPE    A G
Sbjct:  945 MALAKVFKYFEDEKSVLNIQDYSVGQTTLEQIFNQFASSQDNPENSAAAKG 995          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: G4ZWA3_PHYSP (Lipid exporter ABCA1 family n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZWA3_PHYSP)

HSP 1 Score: 55.5 bits (132), Expect = 1.460e-7
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSR-ENPEVRLGAGG 51
            LA+VF   EA+K +LG+  YAV QTTLEQIFNNFAG + E   V  G GG
Sbjct: 1901 LASVFRRVEASKQQLGIREYAVSQTTLEQIFNNFAGQQSEEKGVARGIGG 1950          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A482SWD2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWD2_9ARCH)

HSP 1 Score: 52.0 bits (123), Expect = 9.480e-7
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSRENPE 44
            LA +F  FEA K  L +  Y+VGQTTLEQIFN FA  + NP+
Sbjct:  124 LADIFAKFEANKAALSIHEYSVGQTTLEQIFNQFAAKQHNPD 165          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A0W8DA46_PHYNI (ABC transporter domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DA46_PHYNI)

HSP 1 Score: 52.8 bits (125), Expect = 1.300e-6
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSR-ENPEVRLGAGG 51
            LA+VF   E +K +LG+  YAV QTTLEQIFNNFAG + E   V  G GG
Sbjct:  802 LASVFRCVEGSKQQLGIREYAVSQTTLEQIFNNFAGQQSEEKGVARGIGG 851          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A2P4XMU0_9STRA (ABC Superfamily n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMU0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.310e-6
Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSR-ENPEVRLGAGG 51
            LA VF   E +K ++G+  YAV QTTLEQIFNNFAG + E   V  G GG
Sbjct: 1303 LATVFRRVEGSKQQIGIREYAVSQTTLEQIFNNFAGQQSEEKGVARGIGG 1352          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A0W8CBM2_PHYNI (ABC transporter A family member 1 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CBM2_PHYNI)

HSP 1 Score: 52.8 bits (125), Expect = 1.310e-6
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSR-ENPEVRLGAGG 51
            LA+VF   E +K +LG+  YAV QTTLEQIFNNFAG + E   V  G GG
Sbjct: 1834 LASVFRCVEGSKQQLGIREYAVSQTTLEQIFNNFAGQQSEEKGVARGIGG 1883          
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Match: A0A3R7KIT9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KIT9_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.310e-6
Identity = 29/50 (58.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    3 LAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSR-ENPEVRLGAGG 51
            LA VF   E +K +LG+  YAV QTTLEQIFNNFAG + E   V  G GG
Sbjct: 2792 LANVFRRVEGSKKQLGIREYAVSQTTLEQIFNNFAGQQSEEKGVARGIGG 2841          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29659.8056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FL55_ECTSI1.280e-1478.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J891_9PHAE8.260e-1476.60ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A225X1M2_9STRA4.670e-962.00ABC transporter n=2 Tax=Phytophthora TaxID=4783 Re... [more]
A0A812QND9_SYMMI2.230e-856.86ABCA1 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
G4ZWA3_PHYSP1.460e-760.00Lipid exporter ABCA1 family n=8 Tax=Phytophthora T... [more]
A0A482SWD2_9ARCH9.480e-757.14Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0W8DA46_PHYNI1.300e-658.00ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2P4XMU0_9STRA1.310e-656.00ABC Superfamily n=1 Tax=Phytophthora palmivora var... [more]
A0A0W8CBM2_PHYNI1.310e-658.00ABC transporter A family member 1 n=12 Tax=Phytoph... [more]
A0A3R7KIT9_9STRA1.310e-658.00Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29659contigH-paniculata_contig29659:1831..2974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29659.8056.1mRNA_H-paniculata_contig29659.8056.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29659 1553..2974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29659.8056.1 ID=prot_H-paniculata_contig29659.8056.1|Name=mRNA_H-paniculata_contig29659.8056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MTLAAVFGHFEAAKTELGLASYAVGQTTLEQIFNNFAGSRENPEVRLGAG
GN*
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