mRNA_H-paniculata_contig29650.8055.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A6H5KPS7_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS7_9PHAE) HSP 1 Score: 198 bits (503), Expect = 2.190e-63 Identity = 96/106 (90.57%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKE 318
GNRTTPSYVAFT+TERLIGDAAKNQVAMNATNTVFDAKRLIGRR++DPAV SD KHWPF VVEG GGKP IEVSFKGE+KQFAPEE+SSMVLVKMKEIAEAYLGKE
Sbjct: 36 GNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRRYTDPAVASDKKHWPFHVVEGPGGKPTIEVSFKGEKKQFAPEEISSMVLVKMKEIAEAYLGKE 141
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A6H5JJT8_9PHAE (HSP70 protein n=10 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5JJT8_9PHAE) HSP 1 Score: 201 bits (511), Expect = 4.110e-59 Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAFT+TERLIGDAAKNQVAMNATNTVFDAKRLIGRR++DPAV SD KHWPF VVEG GGKP IEVSFKGE+KQFAPEE+SSMVLVKMKEIAEAYLGKEV+ +
Sbjct: 36 GNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRRYTDPAVASDKKHWPFHVVEGPGGKPTIEVSFKGEKKQFAPEEISSMVLVKMKEIAEAYLGKEVKNAV 146
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: Q2TTE3_9STRA (HSP70 (Fragment) n=1 Tax=Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 TaxID=289359 RepID=Q2TTE3_9STRA) HSP 1 Score: 191 bits (484), Expect = 5.640e-58 Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAF DTERLIGDAAKNQVAMNA NTVFDAKRLIGRRF+DP V +DMKHWPF V EG+GGKP I+V+FKGE KQFAPEEVSSMVL KMKEI+EAYLG+EV+ +
Sbjct: 4 GNRTTPSYVAFNDTERLIGDAAKNQVAMNAANTVFDAKRLIGRRFNDPVVQADMKHWPFKVTEGAGGKPTIQVAFKGEVKQFAPEEVSSMVLTKMKEISEAYLGREVKNAV 114
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A6H5KQY2_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY2_9PHAE) HSP 1 Score: 199 bits (506), Expect = 5.910e-58 Identity = 96/111 (86.49%), Postives = 103/111 (92.79%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAFT+TERLIGDAAKNQVAMNATNTVFDAKRLIGR+F+DPAV SD KHWPF VV G GGKP IEVSFKGE+KQFAPEE+SSMVLVKMKEIAEAYLGKEV+ +
Sbjct: 36 GNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRKFTDPAVASDKKHWPFSVVAGPGGKPTIEVSFKGEKKQFAPEEISSMVLVKMKEIAEAYLGKEVKNAV 146
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A7S2MA59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA59_9STRA) HSP 1 Score: 183 bits (465), Expect = 4.380e-57 Identity = 88/111 (79.28%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAFT+TERLIGDAAK+Q AMNATNTVFDAKRLIGR+FSDP V SDMKHWPF V G GG PIIEV +KGE KQF EE+SSMVL KM+EIAEAYLGKEV+ +
Sbjct: 36 GNRTTPSYVAFTETERLIGDAAKSQAAMNATNTVFDAKRLIGRKFSDPGVQSDMKHWPFKVTPGPGGTPIIEVEYKGETKQFKAEEISSMVLTKMREIAEAYLGKEVKNAV 146
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A196SJW9_BLAHN (Heat shock protein (Fragment) n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJW9_BLAHN) HSP 1 Score: 182 bits (461), Expect = 1.180e-56 Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
G RTTPSYVAFTDTERLIGDAAKNQVAMN TNTVFDAKRLIGR+F DP+V SDMKHWPF + G GKP+IEV +KGE+K F+PEE+SSMVL KMK+IAEAYLGKEV+ +
Sbjct: 37 GQRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPSVQSDMKHWPFTLKAGPDGKPLIEVEYKGEKKTFSPEEISSMVLSKMKQIAEAYLGKEVKNAV 147
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A7S2Y2B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B3_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.060e-56 Identity = 87/111 (78.38%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAFTDTERLIGDAAKNQVAMNA NTVFDAKRLIGRRF DP + D+KH PF VV+G+GGKP+I+V FK E K FA EE+SSMVL KMKEIAEAYLGKEV+ +
Sbjct: 14 GNRTTPSYVAFTDTERLIGDAAKNQVAMNAANTVFDAKRLIGRRFDDPCLQDDLKHLPFKVVQGTGGKPMIQVEFKSEAKTFAAEEISSMVLSKMKEIAEAYLGKEVKNAV 124
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: H6WB83_VAULI (Heat shock protein 70 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB83_VAULI) HSP 1 Score: 193 bits (490), Expect = 4.490e-56 Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAFT+TERLIGDAAKNQVAMNATNTVFDAKRLIGRRF+D AV DMKHWPF V++G GGKPII+V+FKGE K FAPEE+SSMVL+KMKEIAEAYLGKEV+ +
Sbjct: 36 GNRTTPSYVAFTETERLIGDAAKNQVAMNATNTVFDAKRLIGRRFTDTAVQQDMKHWPFTVIQGPGGKPIIKVNFKGEEKTFAPEEISSMVLLKMKEIAEAYLGKEVKNAV 146
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: A0A7S0Q9V9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q9V9_9EUKA) HSP 1 Score: 181 bits (459), Expect = 1.090e-55 Identity = 85/111 (76.58%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAF DTERLIGDAAKNQVAMNA+NTVFDAKRLIGR+F D V +DMKHWPF V G+ GKP+I V+FKGE KQF+ EE+SSMVL+KMKEIAEAYLG+EV+ +
Sbjct: 35 GNRTTPSYVAFNDTERLIGDAAKNQVAMNASNTVFDAKRLIGRKFEDAVVQADMKHWPFKVTTGTAGKPVINVTFKGEAKQFSSEEISSMVLIKMKEIAEAYLGREVKNAV 145
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Match: W7TRP6_9STRA (Heat shock protein 70 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRP6_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.760e-55 Identity = 90/111 (81.08%), Postives = 103/111 (92.79%), Query Frame = 1
Query: 1 GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVTSDMKHWPFDVVEGSGGKPIIEVSFKGERKQFAPEEVSSMVLVKMKEIAEAYLGKEVRGVI 333
GNRTTPSYVAFT++ERLIGDAAKNQVAMNA+NTVFDAKRLIGRRFSDP V +DMKHWPF VV+G GGKP+I+V+FKGE K FAPEE+SSMVL+KM+EIAEAYLGKEV+ +
Sbjct: 37 GNRTTPSYVAFTESERLIGDAAKNQVAMNASNTVFDAKRLIGRRFSDPVVQADMKHWPFTVVQGPGGKPLIQVTFKGESKTFAPEEISSMVLIKMREIAEAYLGKEVKNAV 147 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29650.8055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29650.8055.1 >prot_H-paniculata_contig29650.8055.1 ID=prot_H-paniculata_contig29650.8055.1|Name=mRNA_H-paniculata_contig29650.8055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp GNRTTPSYVAFTDTERLIGDAAKNQVAMNATNTVFDAKRLIGRRFSDPAVback to top mRNA from alignment at H-paniculata_contig29650:2031..2366- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29650.8055.1 ID=mRNA_H-paniculata_contig29650.8055.1|Name=mRNA_H-paniculata_contig29650.8055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=336bp|location=Sequence derived from alignment at H-paniculata_contig29650:2031..2366- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29650:2031..2366- >mRNA_H-paniculata_contig29650.8055.1 ID=mRNA_H-paniculata_contig29650.8055.1|Name=mRNA_H-paniculata_contig29650.8055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig29650:2031..2366- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |