mRNA_H-paniculata_contig29633.8053.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig29633.8053.1
Unique NamemRNA_H-paniculata_contig29633.8053.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A6H5KWE3_9PHAE (GCFC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE3_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 3.990e-88
Identity = 144/193 (74.61%), Postives = 167/193 (86.53%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLD-EGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEGRARRWQGQVNFSY 591
            QTKLVS+M++LAPLA+G+  +G  PKLGQELLHNVGLMVGLAETEI TL++RRQ E DRA AL KDAADLR +VD S ERLSR+E VE +L RVHDKV  DP +V+AD++LKAF TLR+RFPEEYAVFGLAQLVPAMAAPV++RSLAGW+PLQAPT+PA LLASWKDVL DTSG  +GEGRARRW+GQ  F +
Sbjct:   80 QTKLVSTMDNLAPLASGVGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVLKRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEF 272          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: D8LQD4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD4_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 5.320e-85
Identity = 144/193 (74.61%), Postives = 166/193 (86.01%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLD-EGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEGRARRWQGQVNFSY 591
            QTKLVS+M+DLAPLA+G   +G  PKLGQELLHNVGLMVGLAETEI TL++RR+ E DRA AL KDAADLR +VD S ERLSR+E VE +L RVHDKV  DP +V+AD++LKAF TLR+RFPEEYAVFGLAQLVPAMAAPV++RSLAGW+PLQAPT+PA LLASWKDVL DTSG  +GEGRARRW+GQ  F +
Sbjct:  510 QTKLVSTMDDLAPLASGAGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRKVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVLKRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEF 702          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A7S2STN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.030e-26
Identity = 71/180 (39.44%), Postives = 108/180 (60.00%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLDEG--------EKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLR-QRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDT 528
            QTK++S +ED+     GL++G         K  LGQELLHN+ L V +AE++I T +QR++ E D+   L  +   L  RV     +L R   +EA L+R+    +S    ++A+ +L+A   LR     EE+A+FGLAQLVP + APVI  +LA W+PL  PT+ A++LA+W+ ++  T
Sbjct:  336 QTKVLSGLEDIGTSGGGLEDGAAEEERLPRKRPLGQELLHNISLCVDIAESKIRTFDQRQRGEADQREVLRGELEALEQRVVSGKHQLDRFVDMEARLARL----DSSAANMAAEELLEALRDLRADERAEEFAMFGLAQLVPGLMAPVIEDALADWDPLSHPTRGAAVLAAWRPLVART 511          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A7S2XY91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY91_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.790e-21
Identity = 52/117 (44.44%), Postives = 81/117 (69.23%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLR 366
            Q KL+SS+ED+    +    G K  LGQELLHNV L+V L  + +  L++RRQA+KDR  AL +D A+L+ RV++ ++R+S +++V+ ++SRV  KVE+D   +  + +L+ FDTLR
Sbjct:   21 QVKLLSSLEDINYAPSDKGAG-KTVLGQELLHNVDLVVELCASSLAALDRRRQAQKDRTKALNRDKAELQGRVEEQADRMSSLKEVKEIISRVAKKVETDAADLRLEAVLRVFDTLR 136          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A150H3B5_GONPE (G-patch domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3B5_GONPE)

HSP 1 Score: 85.1 bits (209), Expect = 9.350e-16
Identity = 59/180 (32.78%), Postives = 94/180 (52.22%), Query Frame = 1
Query:   13 LQTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEG 552
            +Q +++++++ L   A    EG+K  +  EL HN+ L+V LAE  I  L+ + + E+D AT LA+D   L +     +   +R+E V A +  V       P A   D +   +  LR+R+ EEY ++GLAQ   A A P ++  L GW PL  P++ A  L  W+ +L      +DG G
Sbjct:  358 MQARVITNLQHLNAEAV-TSEGDKTPM-PELQHNLRLLVDLAEAAIQKLDAKLRHEQDTATLLARDKQRLEAEEARQAAAAARLEAVTAEVMAVRGL----PAATPLDELAAQYGKLRERYREEYIMYGLAQAALAQALPRLQALLRGWQPLAEPSRGAEELRIWRQLLT-----QDGSG 526          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A2I0VT34_9ASPA (Zinc finger CCCH domain-containing protein 22 n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0VT34_9ASPA)

HSP 1 Score: 81.3 bits (199), Expect = 1.990e-14
Identity = 47/168 (27.98%), Postives = 95/168 (56.55%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVL 519
            Q +++S++E+L        E + P    EL HNV L+V +AE++IL ++ + + E++   +L K+   L+        +L  +E +  ++ +V +  +S  G ++ + +L+ F  L++RF E+Y +F ++ +  + A P + R   GW PLQ P    ++++SW+D+L
Sbjct:  305 QARVLSNLENLNAEVEA-KENQVPM--PELQHNVRLIVDMAESDILKIDNQLRRERENVVSLQKEKEKLQKEAARQKRQLEAMETIAKMVKQVEE--DSLSGILTLESLLRTFSDLKERFAEDYKLFNISCIACSFAIPQLIRVFQGWEPLQNPLHGLTVMSSWRDLL 467          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: D8U8W2_VOLCA (G-patch domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8W2_VOLCA)

HSP 1 Score: 80.9 bits (198), Expect = 2.660e-14
Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVL----------LDTSGLEDGEG 552
            Q +++++++ L    T    G+K  +  EL HN+ L+V LAE  I  L+ + + E+D AT LA++   L +      E  SR+E V A +  V       P A     + +A+  +R+R+ EEY ++GLAQ   A   P ++  L GW PL  P +    + +WK++L           DT G   G G
Sbjct:  248 QARVITNLQHLNQ-ETVTATGDKTPM-PELQHNLRLLVDLAEAAIQKLDAKLRHEQDTATLLAREKERLEAEDARQEEACSRLEAVSAEVEAVRGM----PAATPLGELAEAYGRIRERYREEYIMYGLAQAALAQVLPRMQALLRGWEPLSEPLRGVPEIKTWKELLQSDAAGGGGPYDTVGASAGSG 430          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A835XZY6_9CHLO (G-patch domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZY6_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 3.740e-14
Identity = 54/175 (30.86%), Postives = 90/175 (51.43%), Query Frame = 1
Query:   16 QTKLVSSMEDL--APLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSG 534
            Q +++++++ L    +  G D+   P    EL HN+ L+V LAE  I  L+ + + E+D AT LA++   L       +    R+E+V   +  V D       + +   +  A+  +R RF EEY ++G+AQ   A A P ++  L GW PLQ PT+  + + +WK +L   SG
Sbjct:  419 QARVITNLQHLNEEQVTAGGDKTPMP----ELQHNLRLLVDLAEAGIQKLDAKLRHEQDTATLLAREKQRLEDEEARQAVACKRLEEVADAVQAVRDL---PAASTTLGELAAAYGAIRDRFREEYIMYGIAQAALAQALPRMQALLRGWQPLQEPTRGTAEMRTWKALLQGESG 586          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A835WNM8_9CHLO (G-patch domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WNM8_9CHLO)

HSP 1 Score: 77.8 bits (190), Expect = 3.190e-13
Identity = 54/172 (31.40%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTS 531
            Q +LV+++E L    T    G+K  +  EL HN+ L+V +AE  I  L+ + + E+D AT LA++   L       +   +R+E+V A +  V    +      S   +  A+  +R+R+ EEY ++GLAQ   A A P ++  + GWNPL  P +    + +WK +L   S
Sbjct:  411 QARLVTNLEHLNAETT-THTGDKTPM-PELQHNLRLLVDMAEAAIGRLDAKLRHEQDTATLLAREKQRLEEEDARQAAACARLEEVAAEVEAVR---QLPAATTSLSDLAAAYGRIRERYREEYIMYGLAQAALAQALPRMQALMRGWNPLTEPRRGLEEMRTWKALLAGDS 577          
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A1D1XVA0_9ARAE (Tuftelin-interacting protein 11 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XVA0_9ARAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.660e-12
Identity = 42/140 (30.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  100 ELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVL 519
            EL +N+ L++ L+E EI  ++   + E++   +L ++   LR        +L  +E +  VL  V +  ES  G+++ D +L  F++L++R+PEEY +  +  +  +   P++ R   GW PLQ P   + L+ SWK +L
Sbjct:  344 ELQYNLKLILDLSEVEIQKIDGELRRERENVVSLQREKEKLRKEEARQKRQLDIMEALLGVLEEVQE--ESSSGSLTLDSVLDTFNSLKERYPEEYKLCNIGCIACSFVHPLLIRVFQGWEPLQNPMYGSELMRSWKKLL 481          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWE3_9PHAE3.990e-8874.61GCFC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LQD4_ECTSI5.320e-8574.61G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2STN5_9STRA1.030e-2639.44Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2XY91_9STRA1.790e-2144.44Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A150H3B5_GONPE9.350e-1632.78G-patch domain-containing protein n=1 Tax=Gonium p... [more]
A0A2I0VT34_9ASPA1.990e-1427.98Zinc finger CCCH domain-containing protein 22 n=2 ... [more]
D8U8W2_VOLCA2.660e-1430.69G-patch domain-containing protein n=1 Tax=Volvox c... [more]
A0A835XZY6_9CHLO3.740e-1430.86G-patch domain-containing protein n=1 Tax=Edaphoch... [more]
A0A835WNM8_9CHLO3.190e-1331.40G-patch domain-containing protein n=2 Tax=Chlamydo... [more]
A0A1D1XVA0_9ARAE2.660e-1230.00Tuftelin-interacting protein 11 n=1 Tax=Anthurium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29633contigH-paniculata_contig29633:169..2072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.1
Seed ortholog evalue9.9e-74
Seed eggNOG ortholog2880.D8LQD4
Preferred nameTFIP11
KEGG koko:K13103
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000723,GO:0000781,GO:0000784,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006282,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008380,GO:0009892,GO:0009987,GO:0010467,GO:0010605,GO:0016043,GO:0016070,GO:0016071,GO:0016233,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0022411,GO:0030154,GO:0030198,GO:0031012,GO:0031323,GO:0031324,GO:0031333,GO:0031848,GO:0031974,GO:0031981,GO:0032091,GO:0032200,GO:0032502,GO:0032984,GO:0032988,GO:0032991,GO:0033554,GO:0034641,GO:0042592,GO:0042752,GO:0043021,GO:0043062,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043247,GO:0043254,GO:0043393,GO:0043933,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045738,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051100,GO:0051105,GO:0051107,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051340,GO:0051352,GO:0051716,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070990,GO:0071008,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0098687,GO:1901360,GO:1902494,GO:1904875,GO:1904876,GO:1990446,GO:1990904,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001032,GO:2001033
EggNOG free text desc.spliceosomal complex disassembly
EggNOG OGsKOG2184@1,KOG2184@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_005200.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons4
Model size591
Cds size591
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29633.8053.1prot_H-paniculata_contig29633.8053.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig29633 169..2072 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929904.267217-CDS-H-paniculata_contig29633:168..2881622929904.267217-CDS-H-paniculata_contig29633:168..288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 169..288 -
1691481062.9117455-CDS-H-paniculata_contig29633:168..2881691481062.9117455-CDS-H-paniculata_contig29633:168..288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 169..288 -
1622929904.285911-CDS-H-paniculata_contig29633:609..7321622929904.285911-CDS-H-paniculata_contig29633:609..732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 610..732 -
1691481062.929085-CDS-H-paniculata_contig29633:609..7321691481062.929085-CDS-H-paniculata_contig29633:609..732Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 610..732 -
1622929904.3017342-CDS-H-paniculata_contig29633:1359..15541622929904.3017342-CDS-H-paniculata_contig29633:1359..1554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 1360..1554 -
1691481062.9385936-CDS-H-paniculata_contig29633:1359..15541691481062.9385936-CDS-H-paniculata_contig29633:1359..1554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 1360..1554 -
1622929904.322675-CDS-H-paniculata_contig29633:1919..20721622929904.322675-CDS-H-paniculata_contig29633:1919..2072Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 1920..2072 -
1691481062.9481385-CDS-H-paniculata_contig29633:1919..20721691481062.9481385-CDS-H-paniculata_contig29633:1919..2072Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig29633 1920..2072 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig29633.8053.1

>prot_H-paniculata_contig29633.8053.1 ID=prot_H-paniculata_contig29633.8053.1|Name=mRNA_H-paniculata_contig29633.8053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MPWLLQTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEI
LTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHD
KVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSL
AGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEGRARRWQGQVNFSY
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mRNA from alignment at H-paniculata_contig29633:169..2072-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig29633.8053.1 ID=mRNA_H-paniculata_contig29633.8053.1|Name=mRNA_H-paniculata_contig29633.8053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1904bp|location=Sequence derived from alignment at H-paniculata_contig29633:169..2072- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCATGGCTCCTCCAGACTAAGCTTGTGAGCAGCATGGAGGACCTGGC GCCCCTAGCTACGGGGTTGGACGAGGGTGAGAAACCCAAGCTCGGGCAAG AGCTGCTCCACAACGTCGGCTTGATGGTGGGCTTGGCAGAGACCGAGATA CTGGTCAGTAAATGCAAGAGATTTTTTTTTTCTTTTTAATCGGAATCTGA AATTTGAAGTGTTTAGATATGTTTTGAAATTCCCGCTTGAAACGTGGATC ATAATCCAAGGTTTCGAAGGATTCGAATGTTTTGAAATTGACGCCTGGAT TTTGTTCAGAGTCTGAGATTCGAATAGTTGGAATGTTGTGAAGTGAAATG TTTGTTGAAGAATTTTTTTCAGAGTCTTCAGGTTCGAATATTTCGAAATT TCCGTTTTGAGTTTTTTGGGGTTTTTTTTTCGTGATGGTGAGGCCGCTTC TTTTCAACGTTTGATTTTTTTACCTTGGTAACTTAAAAAAACAAGAATTA ATTGAAAACCTGTTACAGACGTTAAATCAACGACGGCAAGCCGAGAAGGA TCGAGCCACTGCTCTCGCGAAGGACGCCGCAGACCTCCGAAGTAGGGTGG ACGATTCCAGCGAGCGGCTATCTCGGATAGAGCAGGTTGAAGCGGTGCTG AGTCGCGTGCACGACAAGGTGGAGAGCGATCCAGGGGCAGTATCTGCCGA TCATATTCTCAAGGTGCCCACGCGTATTTTTTTGTTTCTTTTTTGTCATG TGTTTGCGTTTATTGTTTTTTGTTGAGCATACTTGTATTTTCGTTTATTT TGTTGATTAATGTTCTATTTTTGTTAATGATTATTGTGAAAAAAAATTCA GGTATACATTTATTGATTATATTTTATTATCTAATGTTACTGTTACTGTT ACTGTTACTGTTACTGTTACTGTTACTGTTACTGTTACTGTTTGTATTGT GTTTATTGTGTTTATTGTGTTTATTTCGCTGGTAGCATGGAAATGACGAA GATAAACACTACTTTTTATTTCCTAAGAAGTAGCCAAGTAGATGTGGACG ACGCAAAATTGCTACTTTTGTCCGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGAGTGTTTCCGCTCGCCGTGAGAAAAGGTTTCTCTATTTTATTAT TCTTATTATTCGATTTGTTTGGCTCGTGTTCTTGCAGTAATCCATCGAAA AATTGCACCGCACAATATAATAACTAAAAATCCAGATATTTCGTAACGAG TGGTGGTAAGAACTTCGGGATAAAACTGATCAATGGATGTTGATAATCAA AACGTACTTTTTTTTTTTTTTTTTTTTTGGTCGCTCGAAGGCGTTCGATA CACTGCGACAACGCTTCCCGGAAGAATACGCCGTCTTTGGCCTGGCGCAG CTGGTGCCGGCTATGGCTGCTCCCGTCATCAGGCGCTCGCTGGCCGGCTG GAACCCTCTGCAGGTAGGCGTGTTTGGTTCGATTTGTTGGTGTGTTGGCA TACTGGGATAATTAGTATCGTTTTCACAGCGGCGTCTACAATATATGCGA TTACATACATGGATTTGTCCCCTCTGAAGAGAGCAGTGAGAGATTGACTT GTCGGCATATAGCCTGCCTTCGGCTAAAAGAAATCATGCTTGATTCGTGC AAGTTACCCTCACGCTTTTTCAAAAACGTCGCGTCCCGAAGAGATTCATG GGAATTTCGTGATCAGATCAGATCTGTTAAAAAAACCCCAACTATTTCTG ACGATTTTGGATCATCAACGTTGAAATGGCGCAGGCACCTACGCAGCCGG CAAGTCTGCTGGCATCCTGGAAAGATGTACTACTGGACACGTCAGGGTTG GAGGATGGCGAGGGCAGGGCCCGTAGGTGGCAAGGACAGGTAAATTTTTC GTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig29633:169..2072-

>mRNA_H-paniculata_contig29633.8053.1 ID=mRNA_H-paniculata_contig29633.8053.1|Name=mRNA_H-paniculata_contig29633.8053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig29633:169..2072- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCATGGCTCCTCCAGACTAAGCTTGTGAGCAGCATGGAGGACCTGGC
GCCCCTAGCTACGGGGTTGGACGAGGGTGAGAAACCCAAGCTCGGGCAAG
AGCTGCTCCACAACGTCGGCTTGATGGTGGGCTTGGCAGAGACCGAGATA
CTGATGCCATGGCTCCTCCAGACTAAGCTTGTGAGCAGCATGGAGGACCT
GGCGCCCCTAGCTACGGGGTTGGACGAGGGTGAGAAACCCAAGCTCGGGC
AAGAGCTGCTCCACAACGTCGGCTTGATGGTGGGCTTGGCAGAGACCGAG
ATACTGACGTTAAATCAACGACGGCAAGCCGAGAAGGATCGAGCCACTGC
TCTCGCGAAGGACGCCGCAGACCTCCGAAGTAGGGTGGACGATTCCAGCG
AGCGGCTATCTCGGATAGAGCAGGTTGAAGCGGTGCTGAGTCGCGTGCAC
GACAAGGTGGAGAGCGATCCAGGGGCAGTATCTGCCGATCATATTCTCAA
GACGTTAAATCAACGACGGCAAGCCGAGAAGGATCGAGCCACTGCTCTCG
CGAAGGACGCCGCAGACCTCCGAAGTAGGGTGGACGATTCCAGCGAGCGG
CTATCTCGGATAGAGCAGGTTGAAGCGGTGCTGAGTCGCGTGCACGACAA
GGTGGAGAGCGATCCAGGGGCAGTATCTGCCGATCATATTCTCAAGGCGT
TCGATACACTGCGACAACGCTTCCCGGAAGAATACGCCGTCTTTGGCCTG
GCGCAGCTGGTGCCGGCTATGGCTGCTCCCGTCATCAGGCGCTCGCTGGC
CGGCTGGAACCCTCTGCAGGCGTTCGATACACTGCGACAACGCTTCCCGG
AAGAATACGCCGTCTTTGGCCTGGCGCAGCTGGTGCCGGCTATGGCTGCT
CCCGTCATCAGGCGCTCGCTGGCCGGCTGGAACCCTCTGCAGGCACCTAC
GCAGCCGGCAAGTCTGCTGGCATCCTGGAAAGATGTACTACTGGACACGT
CAGGGTTGGAGGATGGCGAGGGCAGGGCCCGTAGGTGGCAAGGACAGGTA
AATTTTTCGTACGCACCTACGCAGCCGGCAAGTCTGCTGGCATCCTGGAA
AGATGTACTACTGGACACGTCAGGGTTGGAGGATGGCGAGGGCAGGGCCC
GTAGGTGGCAAGGACAGGTAAATTTTTCGTAC
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