mRNA_H-paniculata_contig29633.8053.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A6H5KWE3_9PHAE (GCFC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE3_9PHAE) HSP 1 Score: 281 bits (718), Expect = 3.990e-88 Identity = 144/193 (74.61%), Postives = 167/193 (86.53%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLD-EGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEGRARRWQGQVNFSY 591
QTKLVS+M++LAPLA+G+ +G PKLGQELLHNVGLMVGLAETEI TL++RRQ E DRA AL KDAADLR +VD S ERLSR+E VE +L RVHDKV DP +V+AD++LKAF TLR+RFPEEYAVFGLAQLVPAMAAPV++RSLAGW+PLQAPT+PA LLASWKDVL DTSG +GEGRARRW+GQ F +
Sbjct: 80 QTKLVSTMDNLAPLASGVGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVLKRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEF 272
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: D8LQD4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD4_ECTSI) HSP 1 Score: 280 bits (717), Expect = 5.320e-85 Identity = 144/193 (74.61%), Postives = 166/193 (86.01%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLD-EGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEGRARRWQGQVNFSY 591
QTKLVS+M+DLAPLA+G +G PKLGQELLHNVGLMVGLAETEI TL++RR+ E DRA AL KDAADLR +VD S ERLSR+E VE +L RVHDKV DP +V+AD++LKAF TLR+RFPEEYAVFGLAQLVPAMAAPV++RSLAGW+PLQAPT+PA LLASWKDVL DTSG +GEGRARRW+GQ F +
Sbjct: 510 QTKLVSTMDDLAPLASGAGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRKVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVLKRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEF 702
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A7S2STN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN5_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.030e-26 Identity = 71/180 (39.44%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLDEG--------EKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLR-QRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDT 528
QTK++S +ED+ GL++G K LGQELLHN+ L V +AE++I T +QR++ E D+ L + L RV +L R +EA L+R+ +S ++A+ +L+A LR EE+A+FGLAQLVP + APVI +LA W+PL PT+ A++LA+W+ ++ T
Sbjct: 336 QTKVLSGLEDIGTSGGGLEDGAAEEERLPRKRPLGQELLHNISLCVDIAESKIRTFDQRQRGEADQREVLRGELEALEQRVVSGKHQLDRFVDMEARLARL----DSSAANMAAEELLEALRDLRADERAEEFAMFGLAQLVPGLMAPVIEDALADWDPLSHPTRGAAVLAAWRPLVART 511
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A7S2XY91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY91_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.790e-21 Identity = 52/117 (44.44%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLR 366
Q KL+SS+ED+ + G K LGQELLHNV L+V L + + L++RRQA+KDR AL +D A+L+ RV++ ++R+S +++V+ ++SRV KVE+D + + +L+ FDTLR
Sbjct: 21 QVKLLSSLEDINYAPSDKGAG-KTVLGQELLHNVDLVVELCASSLAALDRRRQAQKDRTKALNRDKAELQGRVEEQADRMSSLKEVKEIISRVAKKVETDAADLRLEAVLRVFDTLR 136
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A150H3B5_GONPE (G-patch domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3B5_GONPE) HSP 1 Score: 85.1 bits (209), Expect = 9.350e-16 Identity = 59/180 (32.78%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 13 LQTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSGLEDGEG 552
+Q +++++++ L A EG+K + EL HN+ L+V LAE I L+ + + E+D AT LA+D L + + +R+E V A + V P A D + + LR+R+ EEY ++GLAQ A A P ++ L GW PL P++ A L W+ +L +DG G
Sbjct: 358 MQARVITNLQHLNAEAV-TSEGDKTPM-PELQHNLRLLVDLAEAAIQKLDAKLRHEQDTATLLARDKQRLEAEEARQAAAAARLEAVTAEVMAVRGL----PAATPLDELAAQYGKLRERYREEYIMYGLAQAALAQALPRLQALLRGWQPLAEPSRGAEELRIWRQLLT-----QDGSG 526
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A2I0VT34_9ASPA (Zinc finger CCCH domain-containing protein 22 n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0VT34_9ASPA) HSP 1 Score: 81.3 bits (199), Expect = 1.990e-14 Identity = 47/168 (27.98%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVL 519
Q +++S++E+L E + P EL HNV L+V +AE++IL ++ + + E++ +L K+ L+ +L +E + ++ +V + +S G ++ + +L+ F L++RF E+Y +F ++ + + A P + R GW PLQ P ++++SW+D+L
Sbjct: 305 QARVLSNLENLNAEVEA-KENQVPM--PELQHNVRLIVDMAESDILKIDNQLRRERENVVSLQKEKEKLQKEAARQKRQLEAMETIAKMVKQVEE--DSLSGILTLESLLRTFSDLKERFAEDYKLFNISCIACSFAIPQLIRVFQGWEPLQNPLHGLTVMSSWRDLL 467
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: D8U8W2_VOLCA (G-patch domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8W2_VOLCA) HSP 1 Score: 80.9 bits (198), Expect = 2.660e-14 Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVL----------LDTSGLEDGEG 552
Q +++++++ L T G+K + EL HN+ L+V LAE I L+ + + E+D AT LA++ L + E SR+E V A + V P A + +A+ +R+R+ EEY ++GLAQ A P ++ L GW PL P + + +WK++L DT G G G
Sbjct: 248 QARVITNLQHLNQ-ETVTATGDKTPM-PELQHNLRLLVDLAEAAIQKLDAKLRHEQDTATLLAREKERLEAEDARQEEACSRLEAVSAEVEAVRGM----PAATPLGELAEAYGRIRERYREEYIMYGLAQAALAQVLPRMQALLRGWEPLSEPLRGVPEIKTWKELLQSDAAGGGGPYDTVGASAGSG 430
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A835XZY6_9CHLO (G-patch domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZY6_9CHLO) HSP 1 Score: 80.5 bits (197), Expect = 3.740e-14 Identity = 54/175 (30.86%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 16 QTKLVSSMEDL--APLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTSG 534
Q +++++++ L + G D+ P EL HN+ L+V LAE I L+ + + E+D AT LA++ L + R+E+V + V D + + + A+ +R RF EEY ++G+AQ A A P ++ L GW PLQ PT+ + + +WK +L SG
Sbjct: 419 QARVITNLQHLNEEQVTAGGDKTPMP----ELQHNLRLLVDLAEAGIQKLDAKLRHEQDTATLLAREKQRLEDEEARQAVACKRLEEVADAVQAVRDL---PAASTTLGELAAAYGAIRDRFREEYIMYGIAQAALAQALPRMQALLRGWQPLQEPTRGTAEMRTWKALLQGESG 586
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A835WNM8_9CHLO (G-patch domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WNM8_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 3.190e-13 Identity = 54/172 (31.40%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 16 QTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVLLDTS 531
Q +LV+++E L T G+K + EL HN+ L+V +AE I L+ + + E+D AT LA++ L + +R+E+V A + V + S + A+ +R+R+ EEY ++GLAQ A A P ++ + GWNPL P + + +WK +L S
Sbjct: 411 QARLVTNLEHLNAETT-THTGDKTPM-PELQHNLRLLVDMAEAAIGRLDAKLRHEQDTATLLAREKQRLEEEDARQAAACARLEEVAAEVEAVR---QLPAATTSLSDLAAAYGRIRERYREEYIMYGLAQAALAQALPRMQALMRGWNPLTEPRRGLEEMRTWKALLAGDS 577
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Match: A0A1D1XVA0_9ARAE (Tuftelin-interacting protein 11 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XVA0_9ARAE) HSP 1 Score: 75.1 bits (183), Expect = 2.660e-12 Identity = 42/140 (30.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 100 ELLHNVGLMVGLAETEILTLNQRRQAEKDRATALAKDAADLRSRVDDSSERLSRIEQVEAVLSRVHDKVESDPGAVSADHILKAFDTLRQRFPEEYAVFGLAQLVPAMAAPVIRRSLAGWNPLQAPTQPASLLASWKDVL 519
EL +N+ L++ L+E EI ++ + E++ +L ++ LR +L +E + VL V + ES G+++ D +L F++L++R+PEEY + + + + P++ R GW PLQ P + L+ SWK +L
Sbjct: 344 ELQYNLKLILDLSEVEIQKIDGELRRERENVVSLQREKEKLRKEEARQKRQLDIMEALLGVLEEVQE--ESSSGSLTLDSVLDTFNSLKERYPEEYKLCNIGCIACSFVHPLLIRVFQGWEPLQNPMYGSELMRSWKKLL 481 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29633.8053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29633.8053.1 >prot_H-paniculata_contig29633.8053.1 ID=prot_H-paniculata_contig29633.8053.1|Name=mRNA_H-paniculata_contig29633.8053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp MPWLLQTKLVSSMEDLAPLATGLDEGEKPKLGQELLHNVGLMVGLAETEIback to top mRNA from alignment at H-paniculata_contig29633:169..2072- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29633.8053.1 ID=mRNA_H-paniculata_contig29633.8053.1|Name=mRNA_H-paniculata_contig29633.8053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1904bp|location=Sequence derived from alignment at H-paniculata_contig29633:169..2072- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29633:169..2072- >mRNA_H-paniculata_contig29633.8053.1 ID=mRNA_H-paniculata_contig29633.8053.1|Name=mRNA_H-paniculata_contig29633.8053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig29633:169..2072- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |