prot_H-paniculata_contig29219.7969.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig29219.7969.1
Unique Nameprot_H-paniculata_contig29219.7969.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.780e-47
Identity = 104/259 (40.15%), Postives = 144/259 (55.60%), Query Frame = 0
Query:    2 KLLHERLGHVR--------DLHTVAQPQDIKLRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQ----IKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGG-IPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            +L H+R GH+         ++     P+ IK   K G+C TCER + +K+       E+  E LELVHTD+ GPV+  S G   +AI F DDY+R R VY ++HKSE+L  LK++ +D+  +        ++ LRSD G E+TG  F+ FC  +GI+Q+F   Y PQ NGVAE+SW  +  M +S  I   +G R  AEA   A Y LNR+ T     G  PY K  G    +   R FGC A+V   S +R KF+D+A
Sbjct:   22 ELWHQRFGHMNYEYLRQMGEIDGTGVPKGIK---KPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLRSDNGGEYTGIDFKNFCKNHGIRQDFGIPYGPQDNGVAEKSWHVLSNMARSLRIQAGLGKRFWAEALNTAAYILNRSRTSALGPGETPYYKMFGKHTSVKHFRTFGCKAFVHDTSVRRGKFDDRA 277          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A2Z6P4L8_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P4L8_TRISU)

HSP 1 Score: 177 bits (450), Expect = 3.080e-47
Identity = 99/251 (39.44%), Postives = 142/251 (56.57%), Query Frame = 0
Query:    3 LLHERLGHV--RDLHTVAQPQDIKLRGKLGI----CSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            L H R GH+  + L T+     ++      +    C+ C + +  +  +++    + +E+LELVH DI GP+   SEG+  + I F+DDYSR   VY L +KS+A  T K F+  + K TGL IK LR+D+G EFT   F+++C  NGIK++ +  YTPQ+NGVAER  R+V  M +S ++  N+  +   EA   A Y LNR PT       P E W+G  P +  LRVFGC AY      +R K EDK+
Sbjct:  432 LWHRRFGHLSYKGLKTLQTKNMVRGLPSFSVGEIVCTNCLKGKQHRDVISRRSTWRASEKLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKETGLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTVAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWVEAVNWAFYVLNRCPTSSVKEMTPVEAWYGMKPSVGHLRVFGCIAYAHVPDARRTKLEDKS 682          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 176 bits (446), Expect = 9.970e-47
Identity = 93/251 (37.05%), Postives = 141/251 (56.18%), Query Frame = 0
Query:    3 LLHERLGHVR--DLHTVAQPQDIK----LRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERS-EGSCFAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            L H+RLGH     L  ++    +K    ++    +C  C+  +  K P  K    + TE+L+LVHTD+ GP+   S  GS + + F+DDY+RM  V+ L+ KS+      +F+  +   TGLQ+K LRSD G E+T   F++FC + GI+ + +  YTPQ+NGV+ER  R+V EM +  +    +     AEA   +VY LN  PT+   G  P+E WHG TP ++ L+VFGC  Y +    +R K + K+
Sbjct:  395 LWHKRLGHFSYSTLKRMSSNDLVKNLPAIQDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKS 645          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.320e-46
Identity = 100/259 (38.61%), Postives = 142/259 (54.83%), Query Frame = 0
Query:    2 KLLHERLGHVR--------DLHTVAQPQDIKLRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQ----IKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGG-IPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            +L H+R GH+         ++     P+ IK   K G+C TCER + +K+       E+  E LELVHTD+ GPV+  S G   +AI F DDY+R R VY ++HKSE+L  LK++ +D+  +        ++ LRSD G E+TG  F+ FC  +GI+Q+F   Y PQ NG+AE+SW  +  M ++  I   +G    AEA   A Y  NR+       G  PY K  G    +  LR FGC A+V   S +R KF+D+A
Sbjct:   22 ELWHQRFGHMNYEYLRQMGEIDGTGVPKGIK---KPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLRSDNGGEYTGIDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTAAYIWNRSRNSALGPGETPYYKMFGKHASVKHLRTFGCKAFVHDTSVRRGKFDDRA 277          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A2K3KY79_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KY79_TRIPR)

HSP 1 Score: 175 bits (444), Expect = 1.690e-46
Identity = 100/252 (39.68%), Postives = 142/252 (56.35%), Query Frame = 0
Query:    3 LLHERLGHV-----RDLHTVAQPQDIKL--RGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            L H R GH+     + L T    + +     G++ +C  C + +  +  +++    + +E+LELVH DI GP+   SEG+  + I F+DDYSR   VY L +KS+A  T K F+  + K T L IK LR+D+G EFT   F+++C  NGIK++ +  YTPQ+NGVAER  R+V  M +S ++  N+  +  AEA   A Y LNR PT       P E W G  P +  LRVFGC AY      +R K EDK+
Sbjct:  128 LWHRRFGHLSYKGLKTLQTKGMVRGLPCFSEGEI-VCKNCLKGKQHRDVISRRSTWRASEKLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKETDLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTAAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWAEAVNWAFYVLNRCPTSSVKEMTPVEAWCGVKPSVGHLRVFGCIAYAHVPDARRTKLEDKS 378          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A1J3CMV3_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3CMV3_NOCCA)

HSP 1 Score: 162 bits (410), Expect = 1.390e-44
Identity = 87/252 (34.52%), Postives = 138/252 (54.76%), Query Frame = 0
Query:    2 KLLHERLGHV--RDLHTVAQPQDI----KLRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            +L H R GH+  + L+T+   + +    ++     +C  C R +  + P  K  + + TERLEL+H+D+ GP+   S     + I F+DD+SR   +Y +  KSEA    K F+  + K TGL IK LR+D+G E+    F+ FC E+GIK++ +  +TPQ+NGVAER  R++  M ++ ++   +      +A +   + LNR+PT       P E W G  P ++  RVFGC  YV     +R K +DK+
Sbjct:   58 ELWHHRYGHLSYKGLNTLCSKEMVVGLPEIEDVKTVCDACVRGKHHRVPFPKQSKWRATERLELIHSDLCGPISPSSNSQIRYLISFIDDFSRKTWIYFVGEKSEAFDRFKTFKAFVEKQTGLLIKGLRTDRGGEYNSNEFKGFCREHGIKRQLTTAFTPQQNGVAERKNRTIMNMVRAALLEKEVPKSFWPDAVQWVNHILNRSPTLVVKDKTPEEAWSGKKPSVEHFRVFGCVGYVHIPDAKRSKLDDKS 309          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A251SFG3_HELAN (Putative ribonuclease H-like domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SFG3_HELAN)

HSP 1 Score: 170 bits (430), Expect = 1.440e-44
Identity = 97/251 (38.65%), Postives = 143/251 (56.97%), Query Frame = 0
Query:    2 KLLHERLGHVR-DLHTVAQPQDI-----KLRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDK 245
            +L H R GHV  D     + +D+     K+R     C  C   + ++KP +K    Q TE L+LVH+DI GP+   S G C + I F+DDY+R   VY L+ KSEAL+  K F     K +   IK LR+D+G E+  ++F+++   NGI+ + +++YTPQ+NGVAER  R++ E+++S M    + + + AEA     Y LNR  T+      PYE W+G  P ++ LRVFGC AY +   Q R K  +K
Sbjct:  690 RLWHRRYGHVNMDTLIDMKNKDLVIGLPKIRKDDSTCEGCISGKHARKPFHKKMVWQATEPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKTWVYFLKFKSEALYHFKNFRVLNEKQSNHVIKTLRTDRGGEYCSKAFQEYLRLNGIRHQLTNSYTPQQNGVAERKNRTLMELSRSMMNIKQLPNCYWAEAVACTTYILNRTITKTRPNITPYEAWNGQKPNVEHLRVFGCLAYALIPKQHRDKLSNK 940          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.750e-44
Identity = 100/259 (38.61%), Postives = 142/259 (54.83%), Query Frame = 0
Query:    2 KLLHERLGHVR--------DLHTVAQPQDIKLRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQ----IKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGG-IPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            +L H+R GH+         ++     P+ IK   K G+C TCER + +KK       E+  E LELVHTD+ GPV+  S G   +AI F DDY+R R VY ++HKSE+L  LK++ +D+  +        ++ LRSD G E+TG  F+ FC  +GI+Q+F   Y PQ NG+AE+SW  +  M ++  I   +G    AEA   A Y  NR+       G  PY K  G    ++  R FGC A+V   S +R KF+D+A
Sbjct:   68 ELWHQRFGHINYEYLKQMGEIDDTGVPKGIK---KPGVCGTCERAKQTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLRSDNGGEYTGVDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTATYIWNRSRNSTLGAGETPYYKMFGKHASVNHFRTFGCKAFVHDTSVRRGKFDDRA 323          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A251T2S6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T2S6_HELAN)

HSP 1 Score: 169 bits (427), Expect = 3.390e-44
Identity = 96/250 (38.40%), Postives = 141/250 (56.40%), Query Frame = 0
Query:    3 LLHERLGHVR--DLHTVAQPQDI----KLRGKLGICSTCERREASKKPVNKYWEEQTTERLELVHTDIAGPVDERSEGSC-FAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDK 245
            L H R GHV    LH +   + +    K+     IC  C   + ++KP +K    + +E L+L+H+DI GP+  +S G C + I F+DD+SR   VY L+ KS+AL   + F+R      G +IK++R+D+G E+ G  F+ F  ENGI  + + +YTPQ+NGVAER  R++ E+++S M    + + + AEA   A Y LNR  T+      P E W G  P +D LR+FGC AYV    Q R K + K
Sbjct:  356 LWHRRYGHVNFETLHDMGMNETVSGLPKIDKSSHICEGCIFGKHARKPFSKKAVWRASEPLQLIHSDICGPMKTQSIGGCRYFITFIDDFSRKTWVYFLKFKSQALSYFRNFKRLAENQIGYKIKSMRTDRGGEYCGHEFQNFLKENGIHHQLTTSYTPQQNGVAERKNRTLMELSRSMMKMKELPNMYWAEAVSCATYLLNRTITKSVPELTPQEVWSGRKPNVDHLRIFGCIAYVHIPKQNRTKLDVK 605          
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Match: A0A8J5YEG9_9ROSI (Integrase catalytic domain-containing protein n=6 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YEG9_9ROSI)

HSP 1 Score: 168 bits (426), Expect = 4.780e-44
Identity = 94/253 (37.15%), Postives = 140/253 (55.34%), Query Frame = 0
Query:    3 LLHERLGHV--RDLHTVAQPQDIKLRGKL----GICSTCERREASKKP--VNKYWEEQTTERLELVHTDIAGPVDERS-EGSCFAIFFVDDYSRMRKVYALRHKSEALWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSDTYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAPTRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA 246
            L H R GHV  R L  + +   ++   K+     +C  C+  + S+ P  VN+ W  +  ERLELVH+DI GP+   S   S + + F+DD +R   VY ++HKSE L    +F+  +   TG +IK LR+D GAE+  E F++ C   GI  + +  YTPQ+NGV ER  R+V  MT+  +    +  R  AEA   +VY LN+ PTR      P+E W+G  P +  L+VFGC  Y +  +++R K E ++
Sbjct:  454 LWHRRFGHVNFRSLDMLQKQNLVENMSKVEASDSVCDVCQFGKQSRLPFPVNQAW--RARERLELVHSDICGPMKSSSLNDSKYFVLFIDDLTRFCWVYFMKHKSEVLEAFSKFKALVENQTGCKIKALRTDNGAEYLSERFQKLCELAGIHHQLTTVYTPQQNGVCERKNRTVMNMTRCLLFQSKLPSRFWAEAVNTSVYLLNKLPTRAVKDKTPFEAWYGLKPSVSHLKVFGCMCYALIPAERRTKLERRS 704          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29219.7969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TIQ5_9STRA2.780e-4740.15Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A2Z6P4L8_TRISU3.080e-4739.44Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A151T355_CAJCA9.970e-4737.05Retrovirus-related Pol polyprotein from transposon... [more]
W7TGQ6_9STRA1.320e-4638.61Retrotransposon unclassified n=1 Tax=Nannochlorops... [more]
A0A2K3KY79_TRIPR1.690e-4639.68Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
A0A1J3CMV3_NOCCA1.390e-4434.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A251SFG3_HELAN1.440e-4438.65Putative ribonuclease H-like domain-containing pro... [more]
W7T174_9STRA1.750e-4438.61Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A251T2S6_HELAN3.390e-4438.40Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A8J5YEG9_9ROSI4.780e-4437.15Integrase catalytic domain-containing protein n=6 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 55..167
e-value: 5.9E-22
score: 78.1
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 40..217
score: 20.315
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 48..239
e-value: 5.6E-31
score: 109.3
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 4..222
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..222
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 54..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig29219contigH-paniculata_contig29219:219..959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig29219.7969.1mRNA_H-paniculata_contig29219.7969.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig29219 219..959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig29219.7969.1 ID=prot_H-paniculata_contig29219.7969.1|Name=mRNA_H-paniculata_contig29219.7969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
IKLLHERLGHVRDLHTVAQPQDIKLRGKLGICSTCERREASKKPVNKYWE
EQTTERLELVHTDIAGPVDERSEGSCFAIFFVDDYSRMRKVYALRHKSEA
LWTLKQFERDIAKATGLQIKNLRSDQGAEFTGESFRQFCAENGIKQEFSD
TYTPQRNGVAERSWRSVFEMTQSKMITVNMGHRHRAEAARAAVYCLNRAP
TRPHNGGIPYEKWHGTTPKLDRLRVFGCTAYVMFQSQQRCKFEDKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf