mRNA_H-paniculata_contig28724.7829.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: D7FKW8_ECTSI (SAS-6_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW8_ECTSI) HSP 1 Score: 211 bits (538), Expect = 9.130e-68 Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 1
Query: 1 VMQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 348
VMQE+QKLMVEF+DYPNVLIRMLNNC KEPHSHL VFVMQHDVNARLDFIQNMEYKFVELMSLQY RS ED VQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR
Sbjct: 95 VMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSAEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 210
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A835YXQ7_9STRA (SAS-6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ7_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.900e-57 Identity = 92/113 (81.42%), Postives = 104/113 (92.04%), Query Frame = 1
Query: 4 MQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
MQE Q+L ++F DYP VLIRMLN C +EPHSHLAV+VMQH+++ARLDFIQNMEYKF+EL+SL + RSPED VQHQITYRYNAMKSRLALMQARLQ+VNNLVKLKNPSLLLQLQ
Sbjct: 92 MQEQQRLTLDFADYPAVLIRMLNQCIREPHSHLAVYVMQHELDARLDFIQNMEYKFIELLSLHFTRSPEDVVQHQITYRYNAMKSRLALMQARLQDVNNLVKLKNPSLLLQLQ 204
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A7S1XUL9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL9_9STRA) HSP 1 Score: 182 bits (462), Expect = 7.160e-56 Identity = 93/114 (81.58%), Postives = 102/114 (89.47%), Query Frame = 1
Query: 1 VMQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
V+QE QKLMVEF DYPNVLIRMLNNC +EPH+HLAVFVMQ D ARLDFIQNMEYKFVELMS +ARS E++VQH ITYRYNAMK+RLALMQARL EV N++KLKNPSLLLQLQ
Sbjct: 102 VVQEQQKLMVEFADYPNVLIRMLNNCIREPHNHLAVFVMQQDGTARLDFIQNMEYKFVELMSCHFARSSEESVQHHITYRYNAMKTRLALMQARLTEVQNVIKLKNPSLLLQLQ 215
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A6V2Z9A0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Z9A0_HETAK) HSP 1 Score: 181 bits (458), Expect = 2.810e-55 Identity = 92/114 (80.70%), Postives = 104/114 (91.23%), Query Frame = 1
Query: 1 VMQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
V+QE Q+LMVEF DYPNVLIRMLN C +EPH+HLAVFVMQ DV ARLDFIQNMEYKFVELM+ +ARS E+ VQ+QITYRYNAMKS+LALMQ+R+QEVNNLVK+KNPSLLLQLQ
Sbjct: 117 VVQEQQRLMVEFPDYPNVLIRMLNACIQEPHAHLAVFVMQRDVAARLDFIQNMEYKFVELMTCHFARSTEEVVQYQITYRYNAMKSKLALMQSRMQEVNNLVKMKNPSLLLQLQ 230
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A7S2UUP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUP1_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.040e-53 Identity = 91/112 (81.25%), Postives = 99/112 (88.39%), Query Frame = 1
Query: 7 QEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
Q+ Q+LMVEF DYPNVLIRMLNNC KEPHS LAVFVMQ DV+ARLDFIQNMEYKFVELM+ + SPED+VQ ITYRY +MKSRLALMQ RLQEVNNLVK+KNPSLLLQLQ
Sbjct: 116 QDQQRLMVEFPDYPNVLIRMLNNCIKEPHSCLAVFVMQQDVHARLDFIQNMEYKFVELMTCHFVHSPEDSVQRHITYRYKSMKSRLALMQNRLQEVNNLVKMKNPSLLLQLQ 227
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A7S2CBS5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBS5_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.820e-52 Identity = 88/115 (76.52%), Postives = 99/115 (86.09%), Query Frame = 1
Query: 7 QEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVN---ARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
QE QKLMVEF +YPNVLIRMLN+C KEPHSHLAVFVMQH+ ARLDFIQNMEYKFVELMS Q+ + ++ VQ I+YRYNAMKSRL+L+Q RLQEVNNLV+LKNPSLLLQLQ
Sbjct: 16 QEQQKLMVEFPEYPNVLIRMLNSCIKEPHSHLAVFVMQHNAEERAARLDFIQNMEYKFVELMSCQFEHTADEAVQQHISYRYNAMKSRLSLVQTRLQEVNNLVRLKNPSLLLQLQ 130
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A7S3JM65_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JM65_9SPIT) HSP 1 Score: 164 bits (414), Expect = 1.300e-48 Identity = 78/116 (67.24%), Postives = 102/116 (87.93%), Query Frame = 1
Query: 1 VMQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 348
++QEDQKLM+EF DY N+LI+MLN+C KEPHS LAVF+MQ D +ARLDFIQNMEYKFVEL+S+ + S E+ ++ QIT+RYN++KS+LA+MQARLQ++N +VK+KNPSLLLQLQ +
Sbjct: 102 IVQEDQKLMIEFNDYSNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSMDFNASSEEVIRQQITFRYNSVKSKLAIMQARLQDINAIVKIKNPSLLLQLQKQ 217
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A7S0XE79_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XE79_9CHLO) HSP 1 Score: 163 bits (413), Expect = 1.420e-48 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1
Query: 4 MQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
+QE QKLMV+F +YP+V++R LN+C KEPHSHLAVFVM D +ARLDFIQNMEYKFVEL+SL + SPED V+ QI YRYN++KSRLALMQARL +VN LVK+KNP+LLLQLQ
Sbjct: 103 LQEGQKLMVDFAEYPSVIVRNLNHCIKEPHSHLAVFVMMRDGSARLDFIQNMEYKFVELLSLNFLSSPEDMVRQQIAYRYNSLKSRLALMQARLADVNALVKIKNPNLLLQLQ 215
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A067CJZ3_SAPPC (SAS-6_N domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJZ3_SAPPC) HSP 1 Score: 164 bits (414), Expect = 4.110e-48 Identity = 78/114 (68.42%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 1 VMQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
++QE QKLMV+F DY NVL+RMLNNC KEPH+H+AV++MQ D ARLDFIQNMEYKFVEL+S+ +AR+PE+ V+ IT+RYN +KSR++ +Q+RL EVNN+VK+KNPSLLLQLQ
Sbjct: 136 IVQEQQKLMVDFADYANVLVRMLNNCIKEPHNHIAVYLMQSDGRARLDFIQNMEYKFVELLSVDFARAPEEVVRQHITFRYNTVKSRVSALQSRLHEVNNIVKVKNPSLLLQLQ 249
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Match: A0A080Z976_PHYPR (SAS-6_N domain-containing protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A080Z976_PHYPR) HSP 1 Score: 159 bits (401), Expect = 4.720e-48 Identity = 78/113 (69.03%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 4 MQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQNMEYKFVELMSLQYARSPEDTVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 342
MQE Q+LMV+F DY NVLIRMLNNC KEPH+HLAV++MQ D ARLDFIQNMEYKF+EL+S+ + R+ EDT++ IT+RY +MKSRL ++Q RL EVN++VK KNPSLLLQLQ
Sbjct: 1 MQEQQELMVDFTDYANVLIRMLNNCIKEPHNHLAVYLMQADGRARLDFIQNMEYKFIELLSVDFMRASEDTIRQHITFRYTSMKSRLQVLQTRLHEVNSIVKTKNPSLLLQLQ 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28724.7829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28724.7829.1 >prot_H-paniculata_contig28724.7829.1 ID=prot_H-paniculata_contig28724.7829.1|Name=mRNA_H-paniculata_contig28724.7829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp MQEDQKLMVEFRDYPNVLIRMLNNCAKEPHSHLAVFVMQHDVNARLDFIQback to top mRNA from alignment at H-paniculata_contig28724:1886..2870- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28724.7829.1 ID=mRNA_H-paniculata_contig28724.7829.1|Name=mRNA_H-paniculata_contig28724.7829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=985bp|location=Sequence derived from alignment at H-paniculata_contig28724:1886..2870- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28724:1886..2870- >mRNA_H-paniculata_contig28724.7829.1 ID=mRNA_H-paniculata_contig28724.7829.1|Name=mRNA_H-paniculata_contig28724.7829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at H-paniculata_contig28724:1886..2870- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |