prot_H-paniculata_contig287.7822.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig287.7822.1
Unique Nameprot_H-paniculata_contig287.7822.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig287.7822.1 vs. uniprot
Match: D8LSI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI8_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 7.730e-44
Identity = 69/96 (71.88%), Postives = 85/96 (88.54%), Query Frame = 0
Query:   22 MRIPQPWTQQVACEMTVEPIWPFAYSKYNGQKVEGKGRTNTNSQDNRHKCDRRGVRSKCYICEDITCGVDMESNCGYQLQGVNASLLATNVPSVSD 117
            MRIP+PW+++ +CE  VEP+WPF YSKY GQ+VE KGRTNTN QD RH+CDRRGVRSKC++CEDI CG +++++C YQLQGVNASLLATN+PSVSD
Sbjct:    1 MRIPRPWSERSSCEKAVEPVWPFVYSKYRGQEVEAKGRTNTNLQDERHECDRRGVRSKCHVCEDIVCGENLDADCSYQLQGVNASLLATNIPSVSD 96          
BLAST of mRNA_H-paniculata_contig287.7822.1 vs. uniprot
Match: B8BPX3_THAPS (EGF-like domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPX3_THAPS)

HSP 1 Score: 103 bits (257), Expect = 2.410e-23
Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 0
Query:   21 SMRIPQPWTQQVACEMTVEPIWPFAYSKYNGQKVEGKGRTNTNSQDNRHKCDRRGVRSKCYICEDITCGVDMESNCGYQLQGVNASLLATNVPSVSD 117
            +++I + WT Q  CE   +P WPFAYSKY GQ  E KGR ++N QD RHKCD RGV+SKC+ICED            +QLQGV++  ++TN+P++SD
Sbjct:   20 TLQIARTWTAQHWCESVKQPEWPFAYSKYKGQVEETKGRVSSNKQDVRHKCDSRGVKSKCHICEDH-----------FQLQGVSSDDMSTNIPTISD 105          
BLAST of mRNA_H-paniculata_contig287.7822.1 vs. uniprot
Match: A0A812JCG0_9DINO (VWDE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JCG0_9DINO)

HSP 1 Score: 103 bits (256), Expect = 3.260e-23
Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:   18 TGSSMRIPQPWTQQVACEMTVEPIWPFAYSKYNGQKVEGKGRTNTNSQDNRHKCDRRGVRSKCYICEDITCGVDMESNCGYQLQGVNASLLATNVPSVSD 117
            T  + R  +PW  +  C   VEP WPFAY+K  GQ VE KGRT +N Q   H+C   G RSKC+ CED +CG D+ S+C +Q+QGV  + L  +VP+V D
Sbjct:   48 TAYAWRQHRPWNTRPWCSEVVEPSWPFAYAKVGGQTVERKGRTASNLQHMGHECTTAGARSKCFRCEDFSCGPDLNSSCAFQVQGVPHTALPPSVPTVHD 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig287.7822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSI8_ECTSI7.730e-4471.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8BPX3_THAPS2.410e-2350.52EGF-like domain-containing protein n=1 Tax=Thalass... [more]
A0A812JCG0_9DINO3.260e-2348.00VWDE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig287contigH-paniculata_contig287:9516..10930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig287.7822.1mRNA_H-paniculata_contig287.7822.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig287 9516..10931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig287.7822.1 ID=prot_H-paniculata_contig287.7822.1|Name=mRNA_H-paniculata_contig287.7822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MGVVMAVFEYAVFVRIPTGSSMRIPQPWTQQVACEMTVEPIWPFAYSKYN
GQKVEGKGRTNTNSQDNRHKCDRRGVRSKCYICEDITCGVDMESNCGYQL
QGVNASLLATNVPSVSD
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