|
|
Homology
BLAST of mRNA_H-paniculata_contig2859.7786.1 vs. uniprot
Match: A0A6H5KNP8_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP8_9PHAE) HSP 1 Score: 360 bits (924), Expect = 3.770e-103 Identity = 308/821 (37.52%), Postives = 396/821 (48.23%), Query Frame = 1
Query: 436 SPAPTPSWGKIVDPRRQGRWQLLRCVQDGGGDGGVGQVGRGRGNPTAWARRSYSVGYMPVFQDSRAPGIGSTSGGTWGWASQSQVFGGSRACIGAHPMLAGGIVAVCEDTGGIGGGDDGDTEMGRQDLEVEMELEDSSGDTTVEGTAGYRLLAGVAEKKGNRNFQARNFRIMHTWLSGTLSSTVTFPGRISFYPPSFVCSSSSXXXXXXXXVEPDETAAAKGDTQNPINSPSLLEVALIDRDGGVAAAFMTLSSMDPILVGRGDDAMLRENDPVVLALRLYHGASTWRRLSRRPTPRQSRQGSGSRVHPNNLAMAAATDKA---EARDRARSDYESALALIQAGLAVSFADAGSRKSGCIRRRGDENFDGVGKXXXXXXXXXXXXXEIDELAALAIREVLTTAETRALAKGLGVSVSTTPTAMSERSSGGFGSRVWNRSETGGTGGGVXXXXXXXXSRDGSYEGNRRRHGRGGSDSKDEVCSAIEQWLSRPMDAAKRRARVARATQQASRLIGTVKGSSDRGGGSDDIDTVAGSEGVENVELVLRLADDVREAIHRIHVAFFAAARHGPHDALALLREDL-ASVFFGGADAVGCAAGTEKIYGDEEFPPLVERLASSIDEIITRNATRGNAARGADCSPTALPVEIDQAQLRVGCSHPQQDVVSVECGRGSPRVGGKGARGRYPPPAILSSAEIFSEFYRLTVLADDLDLAASSGDSSLAYRSLHEASTVLLPSGCPLCRRNRTRAVATGAERKSSRASVVEVAKRNAKVADGLKVARSAEAAGEGVMKAMDTSGAGFLPKVAAAPPTPHCDICELSARVV 2886
SP P P+WGK+V+PR+Q RW++LR +Q GGG GGV +PTAWARRSYS+ Y PVFQD R PG+GS+SG WGWA QSQVFGG+RAC + + R D E+ DS T AG R +R Q+RNF+ M WLS + +++ + S + AA D +LLE+AL +DGG A AFMTL S+ P + ++A N+P+ LALRLYHGASTWRR+SR P PR RQG GSR+HP++ +AAA D+A E R R+ +++ ALAL+ AGLAVS DAG++ SG + + + D + D LAALA+RE LT +ETR+LAK L + T+ S R G S XXXXXXXX + EG KDE C +E+WL+RP DAAKRR R++RA +QA+ + + D GG+ + +VLRL D+ +EAIHR+HVAFFAAARHGP D LA+LRE L V F GA A G G+ A+G+ RG V GKG + P P +LS E F E+Y+L L+D ++LAA +GD LAY SLHEAST LLPSGCPLCRRN R A+ ++D GA L + PP+ HCDICELSARVV
Sbjct: 100 SPPPAPTWGKLVEPRKQRRWEMLRRLQ-GGGLGGV--------DPTAWARRSYSLSYTPVFQDLRTPGMGSSSG--WGWAFQSQVFGGARACRASSSVPP----------------------RDRSDETDGNEVPDSVHATAA---AGGR----------SRALQSRNFKAMVAWLSSSHAASAVXXXXXXXXAAGALRSPRA--------------AADPADK-------TLLEIALERQDGGPATAFMTLMSLAPEALA--EEAEAEANEPLALALRLYHGASTWRRISRDPPPR--RQGPGSRLHPDDPGLAAAVDEADDCERRRRSGAEHAGALALLSAGLAVSLRDAGAKGSGGRQGKSGQRDD---------------LEDPDLLAALALREALTASETRSLAKALILG----DTSSSLRREPGSSSXXX-----------XXXXXXXXXXXXAAVEG------------KDETCRELEEWLTRPEDAAKRRRRLSRAARQAAEDLAAGRTEGDGEGGATAV-------------VVLRLTDEAQEAIHRVHVAFFAAARHGPQDVLAVLREGLDEGVVFAGAAATGAG---------------------------------GHEAKGSS--------------------------------RG---VAGKGRK--RPAPRVLSCVEAFGEYYKLVSLSDAMELAAGAGDPGLAYGSLHEASTALLPSGCPLCRRNHLRHRTVSAD-------------------------------------SVDGRGAA-LTRTTTTPPS-HCDICELSARVV 685
BLAST of mRNA_H-paniculata_contig2859.7786.1 vs. uniprot
Match: D7FLL1_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL1_ECTSI) HSP 1 Score: 293 bits (750), Expect = 3.210e-80 Identity = 299/908 (32.93%), Postives = 368/908 (40.53%), Query Frame = 1
Query: 181 KIFHYFGTGLSDACSSLTKDRTPEVSSVRAGVVGNGEMGKGGSGXXXXXXXXXNGTGTANQGSSTQHAVIVKCAVGTVAAAPPASSPAPTPSWGKIVDPRRQGRWQLLRCVQDGGGDGGVGQVGRGRGNPTAWARRSYSVGYMPVFQDSRAPGIGSTSGGTWGWASQSQVFGGSRACIGAHPMLAGGIVAVCEDTGGIGGGDDGDTEMGRQDLEVEMELEDSSGDTTVEGTAGYRLLAGVAEKKGNRNFQARNFRIMHTWLSGTLSSTVTFPGRISFYPPSFVCSSSSXXXXXXXXVEPDETAAAKGDTQNPINSPSLLEVALIDRDGGVAAAFMTLSSMDPILVGR--GDDAMLRENDPVVLALRLYHGASTWRRLSRRPTPRQSRQGSGSRVHPNNLAMAAATDKAEARDRAR---SDYESALALIQAGLAVSFADAGSRKSGCIRRRGDENFDGVGKXXXXXXXXXXXXXEIDELAALAIREVLTTAETRALAKGLGVSVSTTPTAMSERSSGGFGSRVWNRSETGGTGGGVXXXXXXXXSRDGSYEGNRRRHGRGGSDSKDEVCSAIEQWLSRPMDAAKRRARVARATQQASRLIGTVKGSSDRGGGSDDIDTVAGSEGVENVELVLRLADDVREAIHRIHVAFFAAARHGPHDALALLREDLAS-VFFGGADAVGCAAGTEKIYGDEEFPPLVERLASSIDEIITRNATRGNAARGADCSPTALPVEIDQAQLRVGCSHPQQDVVSVECGRGSPRVGGKGARGRYPPPAILSSAEIFSEFYRLTVLADDLDLAASSGDSSLAYRSLHEASTVLLPSGCPLCRRNRTRAVATGAERKSSRASVVEVAKRNAKVADGLKVARSAEAAGEGVMKAMDTSGAGFLPKVAAAPPTPHCDICELSARVV 2886
KIFHYFG G + T + P S+ AG G Q + V TV SP+P P+WGK+V+PR+Q RW++LR +Q GGG GGV +PTAWARRSYS+ + PVFQD R PG+GSTSG WGWASQSQVFGG+RAC A P + + G GGDD + DS+ T V AG R +R Q+RNF+ M WLS + +++ ++ P+ SXXXXXXXX P + +LLE+AL +DGG A AFMTL S+ P + +P+ LALRLYHGASTWRR+SR P PR RQG GSR+HP+N +AAA D+A+ R+R R +++ ALAL+ AGLAVS DAG++ SG R D + D L ALA RE LT TR A+ L G + R G GG+ +AI +VLRL D+ REAIHR+HVAFFAAARHGP DA +LRE L V F GA A G A K G F V GKG R P P +LS E F+E+YRL L+D ++LAA +GD LAY SLHEAST L PSGCPLCRRN R + A G HCDICELSARVV
Sbjct: 53 KIFHYFGAGSPE---KGTPRKKPATSTPAAGAAGE----------------------------VPQPVLRVTEPAKTV-------SPSPAPTWGKLVEPRKQQRWEMLRRLQ-GGGLGGV--------DPTAWARRSYSLSHTPVFQDLRPPGMGSTSG--WGWASQSQVFGGARACR-ASPSVP------PRERSGETGGDD---------------VPDSARATVV--AAGGR----------SRALQSRNFKAMVAWLSSSHAASAV---AVAAPVPAAAGXPRSXXXXXXXXANPADK--------------TLLEIALERQDGGPATAFMTLMSLAPEALEEEXXXXXXXXXXEPLALALRLYHGASTWRRISRDPPPR--RQGPGSRLHPDNPGLAAAVDEADDRERRRRSGAEHAGALALLSAGLAVSLRDAGAKGSGGRRGTSGRRDD---------------LEDPDPLVALAPREALTA--TRQAAEDL-------------------------------------------------VAGRKERDGEGGA-------AAI---------------------------------------------------------VVLRLTDEAREAIHRVHVAFFAAARHGPQDAPVVLREGLDDGVVFAGAAATG--ADGHKAKGSSRF------------------------------------------------------------------VAGKGRR--RPAPRVLSCVEAFAEYYRLVSLSDAMELAAGAGDPGLAYGSLHEASTALFPSGCPLCRRNHLR---------------------------------------HRTVTADSVDGGXXXXXXXXXXXXXHCDICELSARVV 619
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 300.8 |
| Seed ortholog evalue | 2.2e-78 |
| Seed eggNOG ortholog | 2880.D7FLL1 |
| KEGG ko | ko:K15363 |
| KEGG Pathway | ko03460,map03460 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | phosphodiesterase I activity |
| EggNOG OGs | KOG2143@1,KOG2143@2759 |
| Ec32 ortholog description | VRR-NUC domain |
| Ec32 ortholog | Ec-17_000730.1 |
| EC | 3.1.4.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03400 |
| Exons | 5 |
| Model size | 2888 |
| Cds size | 2877 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2859.7786.1 >prot_H-paniculata_contig2859.7786.1 ID=prot_H-paniculata_contig2859.7786.1|Name=mRNA_H-paniculata_contig2859.7786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=959bp
MSGDQTSTPKQRGSTGNGRTASNSKNKKVSRVTGAGDDSLSPNNDENNSS
SSSGKKCKIFHYFGTGLSDACSSLTKDRTPEVSSVRAGVVGNGEMGKGGS
GGSARSGIAGNGTGTANQGSSTQHAVIVKCAVGTVAAAPPASSPAPTPSW
GKIVDPRRQGRWQLLRCVQDGGGDGGVGQVGRGRGNPTAWARRSYSVGYM
PVFQDSRAPGIGSTSGGTWGWASQSQVFGGSRACIGAHPMLAGGIVAVCE
DTGGIGGGDDGDTEMGRQDLEVEMELEDSSGDTTVEGTAGYRLLAGVAEK
KGNRNFQARNFRIMHTWLSGTLSSTVTFPGRISFYPPSFVCSSSSCSEMK
CSEVEPDETAAAKGDTQNPINSPSLLEVALIDRDGGVAAAFMTLSSMDPI
LVGRGDDAMLRENDPVVLALRLYHGASTWRRLSRRPTPRQSRQGSGSRVH
PNNLAMAAATDKAEARDRARSDYESALALIQAGLAVSFADAGSRKSGCIR
RRGDENFDGVGKGKGGGGCGGDGDGEIDELAALAIREVLTTAETRALAKG
LGVSVSTTPTAMSERSSGGFGSRVWNRSETGGTGGGVSGGGGSGSSRDGS
YEGNRRRHGRGGSDSKDEVCSAIEQWLSRPMDAAKRRARVARATQQASRL
IGTVKGSSDRGGGSDDIDTVAGSEGVENVELVLRLADDVREAIHRIHVAF
FAAARHGPHDALALLREDLASVFFGGADAVGCAAGTEKIYGDEEFPPLVE
RLASSIDEIITRNATRGNAARGADCSPTALPVEIDQAQLRVGCSHPQQDV
VSVECGRGSPRVGGKGARGRYPPPAILSSAEIFSEFYRLTVLADDLDLAA
SSGDSSLAYRSLHEASTVLLPSGCPLCRRNRTRAVATGAERKSSRASVVE
VAKRNAKVADGLKVARSAEAAGEGVMKAMDTSGAGFLPKVAAAPPTPHCD
ICELSARVV back to topmRNA from alignment at H-paniculata_contig2859:376..5023+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2859.7786.1 ID=mRNA_H-paniculata_contig2859.7786.1|Name=mRNA_H-paniculata_contig2859.7786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4648bp|location=Sequence derived from alignment at H-paniculata_contig2859:376..5023+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TAGGCGCGTATGTCGGGTGATCAGACGTCAACGCCAAAACAGCGAGGTAG
CACCGGCAACGGCAGAACGGCTAGTAATAGTAAGAATAAGAAGGTATCCC
GTGTAACAGGGGCCGGCGACGATTCGCTCTCCCCCAATAACGACGAGAAC
AACAGTTCATCTTCATCCGGGAAAAAATGCAAAATATTCCACTACTTCGG
AACAGGGCTATCGGATGCTTGCTCCTCGCTGACGAAAGATCGAACGCCAG
AGGTTTCAAGCGTACGAGCGGGTGTTGTTGGTAACGGGGAAATGGGCAAG
GGTGGCTCTGGAGGTAGTGCTAGGAGTGGGATCGCGGGAAATGGAACTGG
GACGGCAAATCAAGGATCGTCGACGCAGCATGCTGTGATAGTCAAGTGTG
CAGTAGGTGAGATATTGAAATGGTGCTGAGAGGGTTGTGTTGCTCTGTTT
GGAAAGAGGTCGCGTGCTTCCGATATATATACAAGACCGAACACTCATTC
ACAGGTGGTCTTCGTTTCATATTCCTCTTTTGATGGATGAGTGTGAGACA
TGCTTACCGCGAGTGAGATGTCTCCTCGAAGGGGATGACAGCTTGAGTTG
AAAATATTTTTCCCGTTCGAATTGTGATCTCGGCCAATCGTATTTGTTTG
GTAGGTACGGTTGCCGCGGCACCTCCCGCGTCATCCCCTGCGCCGACCCC
GTCTTGGGGGAAAATAGTAGACCCCCGAAGGCAAGGTCGATGGCAATTGC
TTCGGTGTGTGCAAGACGGGGGAGGTGACGGAGGCGTTGGCCAAGTGGGG
AGAGGGAGAGGTAACCCTACTGCGTGGGCCAGGCGGTCGTACTCAGTAGG
GTACATGCCAGTTTTTCAGGATAGCAGAGCGCCAGGTGAGTACCGGGGAC
GCAGAGGTGATCCTTCTTTTAAGGTTTGGTTAGGATTAGGGTTGAGGAGA
TGCAACTTTTTGTTGTGCGTCAAAATTGCAGCATTTGGTCGTTTCGATTG
TGCTGTGTTCTTCCGATCGAGTGTAGTGGGTGGGCAAGTGGATGATCTAT
TCCGTGCATATAATATATTTTTGGTCGTGCTCTCCTGGCAAATTCTTGTG
ACTCTCCACCATATCTACCAACAACGGTAACATATTTGTATTCGTTGTAG
TGACGTGCTTCTCGCAACTTTTCGTCGAAATTATGAGAACAATCGAAGGT
TGGCAAGCAGCAGGAGTCGCCTATCGACAGTTTTCAGCAACGAATATGTT
GATTCCTTGATCCTCGCTATGATCCATAGTCTTGTTGCACATCCTGTTCT
AGTGTGCGGCAACTTAGCTTTACATGTAAGACCCCTACGCGTCAGCACCA
CCCACGGCGCCCGCTTTCATACCAACGGCCCACTACAGGAATAGGGAGCA
CTAGTGGCGGTACTTGGGGCTGGGCTTCACAAAGCCAAGTTTTCGGGGGA
TCACGGGCTTGCATCGGGGCGCACCCAATGCTCGCAGGTGGCATAGTAGC
CGTTTGTGAGGATACTGGCGGTATTGGGGGTGGAGACGATGGAGACACGG
AGATGGGCCGGCAAGATTTGGAAGTGGAAATGGAACTTGAAGATAGCAGC
GGTGACACTACCGTAGAGGGCACGGCAGGTTATCGTCTCCTGGCGGGCGT
CGCTGAGAAAAAAGGCAACCGAAACTTTCAAGCGCGTAACTTCAGGATAA
TGCATACATGGCTCTCTGGCACCCTGTCTTCAACTGTTACCTTCCCCGGC
CGAATATCGTTTTATCCGCCGTCCTTCGTATGCTCGTCTTCTTCGTGTTC
GGAGATGAAGTGTTCGGAGGTGGAGCCTGATGAAACGGCGGCGGCAAAGG
GAGACACGCAAAATCCAATCAACTCTCCCAGCCTTCTGGAGGTGGCGCTT
ATAGACAGGGATGGGGGTGTCGCTGCGGCGTTCATGACTTTATCGTCAAT
GGATCCAATATTGGTCGGAAGAGGAGACGATGCGATGCTCCGCGAAAACG
ACCCGGTCGTACTCGCACTTCGTCTATACCACGGGGCGTCTACCTGGCGA
CGCCTGTCTCGTCGTCCTACGCCGCGTCAGTCGCGACAAGGGTCCGGTTC
TCGCGTGCACCCGAACAACTTGGCCATGGCGGCAGCGACCGATAAGGCTG
AAGCACGCGCACGGGAGGACCGCGCGCGGTCTGACTACGAGTCGGCGTTG
GCGCTAATACAGGCCGGCCTGGCTGTGTCTTTCGCCGATGCCGGTTCGAG
AAAAAGCGGATGTATAAGACGGCGAGGGGATGAAAATTTCGACGGCGTGG
GTAAGGGCAAAGGCGGCGGTGGCTGCGGTGGTGATGGTGACGGAGAGATT
GATGAGCTCGCAGCCTTAGCCATCCGCGAGGTCTTGACTACCGCAGAAAC
GCGCGCGCTGGCCAAGGGTCTTGGCGTCTCCGTATCTACAACGCCGACAG
CGATGAGCGAGCGCAGTAGCGGTGGTTTCGGCAGTAGGGTTTGGAATAGG
AGCGAGACGGGTGGGACAGGTGGCGGTGTCAGCGGCGGCGGCGGCAGCGG
CAGCAGCCGAGATGGAAGTTATGAGGGAAACAGAAGGAGACATGGACGCG
GTGGGTCCGACAGTAAGGACGAAGTGTGCAGTGCCATTGAGCAATGGCTT
TCGCGACCAATGGACGCGGCCAAACGGAGAGCTCGGGTAGCTCGTGCCAC
ACAGCAAGCCAGTCGTTTGATCGGTACAGTGAAGGGGTCGTCAGATCGCG
GAGGCGGGAGCGATGACATTGATACGGTCGCCGGTAGCGAGGGGGTCGAG
AATGTTGAGCTTGTATTGCGCTTGGCGGATGATGTGCGCGAAGCAATCCA
TCGGATCCACGTGGCCTTTTTCGCCGCCGCTCGGCATGGCCCTCACGACG
CCCTCGCGCTTCTTCGCGAAGACCTAGCCAGTGTATTTTTCGGAGGTGCT
GATGCGGTTGGTTGCGCCGCAGGAACAGAGAAAATATATGGTGACGAGGA
GTTCCCGCCGTTGGTGGAAAGGTTGGCGTCATCCATCGACGAGATCATAA
CAAGGAATGCAACTAGGGGCAATGCTGCTAGAGGCGCTGATTGCTCCCCG
ACTGCGCTGCCTGTCGAAATAGACCAAGCCCAGCTGCGCGTTGGTTGCTC
TCATCCTCAGCAGGATGTTGTTAGTGTGGAGTGTGGACGGGGTTCCCCGC
GTGTGGGTGGGAAAGGGGCCAGGGGTCGATATCCGCCCCCCGCAATATTG
AGTTCTGCGGAGATTTTTTCAGAGTTTTACCGGCTTACGGTGCTAGCGGA
TGACTTGGATCTGGCTGCGAGCTCGGGAGATTCCAGGTGAATGAGAGCGT
GCGATTTGCATCTGGGATATATCTCGTCTGGTGGGCGTGACTAAGTTCAC
GGAGGTACCATTACTGTTTGGTATTCCCATGTAGAGTTACTAGAGAAATC
CACGTTTGATGTGTGTCGTTGTCGTACTTCGAAGTATATCCTCAATGTAT
CGATATGTTGGTAATATAAATATATACATTCATTAATGTGAGGTTGACGG
ACAAATTCATCAATGTTTCCCCGCATATTTCGGCATAGCCATTATCCACC
GAATGTACACAAGTGGTCATGATTTTCTCTGATGAATAGACAATGTCCAT
TGTATTTATTGGCTCTTTTTTGAAAAAAGACAGAGCCAACACGAGACATT
TATCTGTCTCCGGCGAAGTCCCCTCACCAACCCGAGGAGGCGAGCGTTGG
GCTCGCTGTGGCATCGCCCTCTCCAATATTTCGCATATCTTTGTGAATTA
TTGACAACCCCGGTAAGATCCTCAATAAGACGGTTGAATCTAGTGATAAC
AGAACTCTGAACTGAGCGGCTTTTTGTGTATCTCATCCTTTCCCAGATCG
ATTTGTTCGATACTGGGGACTAAGACTGGCATTGGTTAGTTGCCACGGCC
GTACGAGTGTGAAGGTTTTTATTATCCGTAATCGGCAAAAGCATTTCACA
GTGCATGATTGATCGCCACTTCCAATCCGTATCTCCTCGTTCAACCCCCT
CCCCCCCTCTCACTTGCTCTAGTTCTGCTGACGTACGTATTCATAACATA
GCTTGAATTTCAGCTCGGCTGCGTAACCTCATTCATACTGCGTGGGTTGA
GTGCAACAAAGTTACTGTATTGATTGTATACTGTGACAAGTACCAAAGCG
GATTGAGTTGATGAATGACGGCACGCGGGCAAGTGGGTTATATCAGATGT
TCGCTTCACTTCTGAGTCATGCCATGTCCACCCACAGTAGACACGCTCCA
TTGCCTCCCCCTTCCGCCTCCCCCGTTCTTCGCCACAGCCTTGCGTACCG
CTCTCTTCACGAGGCAAGCACAGTTTTGCTACCTTCAGGGTGCCCCCTGT
GCCGCCGAAATCGTACGCGTGCCGTCGCGACTGGGGCAGAGCGCAAATCA
TCACGGGCTAGCGTGGTGGAGGTAGCGAAACGGAATGCAAAAGTTGCCGA
CGGGTTGAAGGTGGCCAGGTCGGCTGAAGCGGCGGGAGAAGGGGTAATGA
AGGCGATGGATACAAGCGGCGCCGGGTTTTTGCCGAAGGTGGCGGCAGCG
CCGCCAACGCCGCACTGCGATATTTGCGAACTGTCCGCACGGGTCGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2859:376..5023+ >mRNA_H-paniculata_contig2859.7786.1 ID=mRNA_H-paniculata_contig2859.7786.1|Name=mRNA_H-paniculata_contig2859.7786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5754bp|location=Sequence derived from alignment at H-paniculata_contig2859:376..5023+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGGTGATCAGACGTCAACGCCAAAACAGCGAGGTAGCACCGGCAA
CGGCAGAACGGCTAGTAATAGTAAGAATAAGAAGGTATCCCGTGTAACAG
GGGCCGGCGACGATTCGCTCTCCCCCAATAACGACGAGAACAACAGTTCA
TCTTCATCCGGGAAAAAATGCAAAATATTCCACTACTTCGGAACAGGGCT
ATCGGATGCTTGCTCCTCGCTGACGAAAGATCGAACGCCAGAGGTTTCAA
GCGTACGAGCGGGTGTTGTTGGTAACGGGGAAATGGGCAAGGGTGGCTCT
GGAGGTAGTGCTAGGAGTGGGATCGCGGGAAATGGAACTGGGACGGCAAA
TCAAGGATCGTCGACGCAGCATGCTGTGATAGTCAAGTGTGCAGTAGATG
TCGGGTGATCAGACGTCAACGCCAAAACAGCGAGGTAGCACCGGCAACGG
CAGAACGGCTAGTAATAGTAAGAATAAGAAGGTATCCCGTGTAACAGGGG
CCGGCGACGATTCGCTCTCCCCCAATAACGACGAGAACAACAGTTCATCT
TCATCCGGGAAAAAATGCAAAATATTCCACTACTTCGGAACAGGGCTATC
GGATGCTTGCTCCTCGCTGACGAAAGATCGAACGCCAGAGGTTTCAAGCG
TACGAGCGGGTGTTGTTGGTAACGGGGAAATGGGCAAGGGTGGCTCTGGA
GGTAGTGCTAGGAGTGGGATCGCGGGAAATGGAACTGGGACGGCAAATCA
AGGATCGTCGACGCAGCATGCTGTGATAGTCAAGTGTGCAGTAGGTACGG
TTGCCGCGGCACCTCCCGCGTCATCCCCTGCGCCGACCCCGTCTTGGGGG
AAAATAGTAGACCCCCGAAGGCAAGGTCGATGGCAATTGCTTCGGTGTGT
GCAAGACGGGGGAGGTGACGGAGGCGTTGGCCAAGTGGGGAGAGGGAGAG
GTAACCCTACTGCGTGGGCCAGGCGGTCGTACTCAGTAGGGTACATGCCA
GTTTTTCAGGATAGCAGAGCGCCAGGTACGGTTGCCGCGGCACCTCCCGC
GTCATCCCCTGCGCCGACCCCGTCTTGGGGGAAAATAGTAGACCCCCGAA
GGCAAGGTCGATGGCAATTGCTTCGGTGTGTGCAAGACGGGGGAGGTGAC
GGAGGCGTTGGCCAAGTGGGGAGAGGGAGAGGTAACCCTACTGCGTGGGC
CAGGCGGTCGTACTCAGTAGGGTACATGCCAGTTTTTCAGGATAGCAGAG
CGCCAGGAATAGGGAGCACTAGTGGCGGTACTTGGGGCTGGGCTTCACAA
AGCCAAGTTTTCGGGGGATCACGGGCTTGCATCGGGGCGCACCCAATGCT
CGCAGGTGGCATAGTAGCCGTTTGTGAGGATACTGGCGGTATTGGGGGTG
GAGACGATGGAGACACGGAGATGGGCCGGCAAGATTTGGAAGTGGAAATG
GAACTTGAAGATAGCAGCGGTGACACTACCGTAGAGGGCACGGCAGGTTA
TCGTCTCCTGGCGGGCGTCGCTGAGAAAAAAGGCAACCGAAACTTTCAAG
CGCGTAACTTCAGGATAATGCATACATGGCTCTCTGGCACCCTGTCTTCA
ACTGTTACCTTCCCCGGCCGAATATCGTTTTATCCGCCGTCCTTCGTATG
CTCGTCTTCTTCGTGTTCGGAGATGAAGTGTTCGGAGGTGGAGCCTGATG
AAACGGCGGCGGCAAAGGGAGACACGCAAAATCCAATCAACTCTCCCAGC
CTTCTGGAGGTGGCGCTTATAGACAGGGATGGGGGTGTCGCTGCGGCGTT
CATGACTTTATCGTCAATGGATCCAATATTGGTCGGAAGAGGAGACGATG
CGATGCTCCGCGAAAACGACCCGGTCGTACTCGCACTTCGTCTATACCAC
GGGGCGTCTACCTGGCGACGCCTGTCTCGTCGTCCTACGCCGCGTCAGTC
GCGACAAGGGTCCGGTTCTCGCGTGCACCCGAACAACTTGGCCATGGCGG
CAGCGACCGATAAGGCTGAAGCACGCGAATAGGGAGCACTAGTGGCGGTA
CTTGGGGCTGGGCTTCACAAAGCCAAGTTTTCGGGGGATCACGGGCTTGC
ATCGGGGCGCACCCAATGCTCGCAGGTGGCATAGTAGCCGTTTGTGAGGA
TACTGGCGGTATTGGGGGTGGAGACGATGGAGACACGGAGATGGGCCGGC
AAGATTTGGAAGTGGAAATGGAACTTGAAGATAGCAGCGGTGACACTACC
GTAGAGGGCACGGCAGGTTATCGTCTCCTGGCGGGCGTCGCTGAGAAAAA
AGGCAACCGAAACTTTCAAGCGCGTAACTTCAGGATAATGCATACATGGC
TCTCTGGCACCCTGTCTTCAACTGTTACCTTCCCCGGCCGAATATCGTTT
TATCCGCCGTCCTTCGTATGCTCGTCTTCTTCGTGTTCGGAGATGAAGTG
TTCGGAGGTGGAGCCTGATGAAACGGCGGCGGCAAAGGGAGACACGCAAA
ATCCAATCAACTCTCCCAGCCTTCTGGAGGTGGCGCTTATAGACAGGGAT
GGGGGTGTCGCTGCGGCGTTCATGACTTTATCGTCAATGGATCCAATATT
GGTCGGAAGAGGAGACGATGCGATGCTCCGCGAAAACGACCCGGTCGTAC
TCGCACTTCGTCTATACCACGGGGCGTCTACCTGGCGACGCCTGTCTCGT
CGTCCTACGCCGCGTCAGTCGCGACAAGGGTCCGGTTCTCGCGTGCACCC
GAACAACTTGGCCATGGCGGCAGCGACCGATAAGGCTGAAGCACGCGACC
GCGCGCGGTCTGACTACGAGTCGGCGTTGGCGCTAATACAGGCCGGCCTG
GCTGTGTCTTTCGCCGATGCCGGTTCGAGAAAAAGCGGATGTATAAGACG
GCGAGGGGATGAAAATTTCGACGGCGTGGGTAAGGGCAAAGGCGGCGGTG
GCTGCGGTGGTGATGGTGACGGAGAGATTGATGAGCTCGCAGCCTTAGCC
ATCCGCGAGGTCTTGACTACCGCAGAAACGCGCGCGCTGGCCAAGGGTCT
TGGCGTCTCCGTATCTACAACGCCGACAGCGATGAGCGAGCGCAGTAGCG
GTGGTTTCGGCAGTAGGGTTTGGAATAGGAGCGAGACGGGTGGGACAGGT
GGCGGTGTCAGCGGCGGCGGCGGCAGCGGCAGCAGCCGAGATGGAAGTTA
TGAGGGAAACAGAAGGAGACATGGACGCGGTGGGTCCGACAGTAAGGACG
AAGTGTGCAGTGCCATTGAGCAATGGCTTTCGCGACCAATGGACGCGGCC
AAACGGAGAGCTCGGGTAGCTCGTGCCACACAGCAAGCCAGTCGTTTGAT
CGGTACAGTGAAGGGGTCGTCAGATCGCGGAGGCGGGAGCGATGACATTG
ATACGGTCGCCGGTAGCGAGGGGGTCGAGAATGTTGAGCTTGTATTGCGC
TTGGCGGATGATGTGCGCGAAGCAATCCATCGGATCCACGTGGCCTTTTT
CGCCGCCGCTCGGCATGGCCCTCACGACGCCCTCGCGCTTCTTCGCGAAG
ACCTAGCCAGTGTATTTTTCGGAGGTGCTGATGCGGTTGGTTGCGCCGCA
GGAACAGAGAAAATATATGGTGACGAGGAGTTCCCGCCGTTGGTGGAAAG
GTTGGCGTCATCCATCGACGAGATCATAACAAGGAATGCAACTAGGGGCA
ATGCTGCTAGAGGCGCTGATTGCTCCCCGACTGCGCTGCCTGTCGAAATA
GACCAAGCCCAGCTGCGCGTTGGTTGCTCTCATCCTCAGCAGGATGTTGT
TAGTGTGGAGTGTGGACGGGGTTCCCCGCGTGTGGGTGGGAAAGGGGCCA
GGGGTCGATATCCGCCCCCCGCAATATTGAGTTCTGCGGAGATTTTTTCA
GAGTTTTACCGGCTTACGGTGCTAGCGGATGACTTGGATCTGGCTGCGAG
CTCGGGAGATTCCAGGACCGCGCGCGGTCTGACTACGAGTCGGCGTTGGC
GCTAATACAGGCCGGCCTGGCTGTGTCTTTCGCCGATGCCGGTTCGAGAA
AAAGCGGATGTATAAGACGGCGAGGGGATGAAAATTTCGACGGCGTGGGT
AAGGGCAAAGGCGGCGGTGGCTGCGGTGGTGATGGTGACGGAGAGATTGA
TGAGCTCGCAGCCTTAGCCATCCGCGAGGTCTTGACTACCGCAGAAACGC
GCGCGCTGGCCAAGGGTCTTGGCGTCTCCGTATCTACAACGCCGACAGCG
ATGAGCGAGCGCAGTAGCGGTGGTTTCGGCAGTAGGGTTTGGAATAGGAG
CGAGACGGGTGGGACAGGTGGCGGTGTCAGCGGCGGCGGCGGCAGCGGCA
GCAGCCGAGATGGAAGTTATGAGGGAAACAGAAGGAGACATGGACGCGGT
GGGTCCGACAGTAAGGACGAAGTGTGCAGTGCCATTGAGCAATGGCTTTC
GCGACCAATGGACGCGGCCAAACGGAGAGCTCGGGTAGCTCGTGCCACAC
AGCAAGCCAGTCGTTTGATCGGTACAGTGAAGGGGTCGTCAGATCGCGGA
GGCGGGAGCGATGACATTGATACGGTCGCCGGTAGCGAGGGGGTCGAGAA
TGTTGAGCTTGTATTGCGCTTGGCGGATGATGTGCGCGAAGCAATCCATC
GGATCCACGTGGCCTTTTTCGCCGCCGCTCGGCATGGCCCTCACGACGCC
CTCGCGCTTCTTCGCGAAGACCTAGCCAGTGTATTTTTCGGAGGTGCTGA
TGCGGTTGGTTGCGCCGCAGGAACAGAGAAAATATATGGTGACGAGGAGT
TCCCGCCGTTGGTGGAAAGGTTGGCGTCATCCATCGACGAGATCATAACA
AGGAATGCAACTAGGGGCAATGCTGCTAGAGGCGCTGATTGCTCCCCGAC
TGCGCTGCCTGTCGAAATAGACCAAGCCCAGCTGCGCGTTGGTTGCTCTC
ATCCTCAGCAGGATGTTGTTAGTGTGGAGTGTGGACGGGGTTCCCCGCGT
GTGGGTGGGAAAGGGGCCAGGGGTCGATATCCGCCCCCCGCAATATTGAG
TTCTGCGGAGATTTTTTCAGAGTTTTACCGGCTTACGGTGCTAGCGGATG
ACTTGGATCTGGCTGCGAGCTCGGGAGATTCCAGCCTTGCGTACCGCTCT
CTTCACGAGGCAAGCACAGTTTTGCTACCTTCAGGGTGCCCCCTGTGCCG
CCGAAATCGTACGCGTGCCGTCGCGACTGGGGCAGAGCGCAAATCATCAC
GGGCTAGCGTGGTGGAGGTAGCGAAACGGAATGCAAAAGTTGCCGACGGG
TTGAAGGTGGCCAGGTCGGCTGAAGCGGCGGGAGAAGGGGTAATGAAGGC
GATGGATACAAGCGGCGCCGGGTTTTTGCCGAAGGTGGCGGCAGCGCCGC
CAACGCCGCACTGCGATATTTGCGAACTGTCCGCACGGGTCGTGCCTTGC
GTACCGCTCTCTTCACGAGGCAAGCACAGTTTTGCTACCTTCAGGGTGCC
CCCTGTGCCGCCGAAATCGTACGCGTGCCGTCGCGACTGGGGCAGAGCGC
AAATCATCACGGGCTAGCGTGGTGGAGGTAGCGAAACGGAATGCAAAAGT
TGCCGACGGGTTGAAGGTGGCCAGGTCGGCTGAAGCGGCGGGAGAAGGGG
TAATGAAGGCGATGGATACAAGCGGCGCCGGGTTTTTGCCGAAGGTGGCG
GCAGCGCCGCCAACGCCGCACTGCGATATTTGCGAACTGTCCGCACGGGT
CGTG back to top
|