prot_H-paniculata_contig2859.7786.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2859.7786.1
Unique Nameprot_H-paniculata_contig2859.7786.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length959
Homology
BLAST of mRNA_H-paniculata_contig2859.7786.1 vs. uniprot
Match: A0A6H5KNP8_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP8_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 3.540e-103
Identity = 308/821 (37.52%), Postives = 396/821 (48.23%), Query Frame = 0
Query:  143 SPAPTPSWGKIVDPRRQGRWQLLRCVQDGGGDGGVGQVGRGRGNPTAWARRSYSVGYMPVFQDSRAPGIGSTSGGTWGWASQSQVFGGSRACIGAHPMLAGGIVAVCEDTGGIGGGDDGDTEMGRQDLEVEMELEDSSGDTTVEGTAGYRLLAGVAEKKGNRNFQARNFRIMHTWLSGTLSSTVTFPGRISFYPPSFVCSSSSXXXXXXXXVEPDETAAAKGDTQNPINSPSLLEVALIDRDGGVAAAFMTLSSMDPILVGRGDDAMLRENDPVVLALRLYHGASTWRRLSRRPTPRQSRQGSGSRVHPNNLAMAAATDKA---EARDRARSDYESALALIQAGLAVSFADAGSRKSGCIRRRGDENFDGVGKXXXXXXXXXXXXXEIDELAALAIREVLTTAETRALAKGLGVSVSTTPTAMSERSSGGFGSRVWNRSETGGTGGGVXXXXXXXXSRDGSYEGNRRRHGRGGSDSKDEVCSAIEQWLSRPMDAAKRRARVARATQQASRLIGTVKGSSDRGGGSDDIDTVAGSEGVENVELVLRLADDVREAIHRIHVAFFAAARHGPHDALALLREDL-ASVFFGGADAVGCAAGTEKIYGDEEFPPLVERLASSIDEIITRNATRGNAARGADCSPTALPVEIDQAQLRVGCSHPQQDVVSVECGRGSPRVGGKGARGRYPPPAILSSAEIFSEFYRLTVLADDLDLAASSGDSSLAYRSLHEASTVLLPSGCPLCRRNRTRAVATGAERKSSRASVVEVAKRNAKVADGLKVARSAEAAGEGVMKAMDTSGAGFLPKVAAAPPTPHCDICELSARVV 959
            SP P P+WGK+V+PR+Q RW++LR +Q GGG GGV        +PTAWARRSYS+ Y PVFQD R PG+GS+SG  WGWA QSQVFGG+RAC  +  +                          R D     E+ DS   T     AG R          +R  Q+RNF+ M  WLS + +++              + S  +              AA   D        +LLE+AL  +DGG A AFMTL S+ P  +   ++A    N+P+ LALRLYHGASTWRR+SR P PR  RQG GSR+HP++  +AAA D+A   E R R+ +++  ALAL+ AGLAVS  DAG++ SG  + +  +  D                 + D LAALA+RE LT +ETR+LAK L +      T+ S R   G  S               XXXXXXXX    + EG            KDE C  +E+WL+RP DAAKRR R++RA +QA+  +   +   D  GG+  +             +VLRL D+ +EAIHR+HVAFFAAARHGP D LA+LRE L   V F GA A G                                   G+ A+G+                                 RG   V GKG +   P P +LS  E F E+Y+L  L+D ++LAA +GD  LAY SLHEAST LLPSGCPLCRRN  R     A+                                     ++D  GA  L +    PP+ HCDICELSARVV
Sbjct:  100 SPPPAPTWGKLVEPRKQRRWEMLRRLQ-GGGLGGV--------DPTAWARRSYSLSYTPVFQDLRTPGMGSSSG--WGWAFQSQVFGGARACRASSSVPP----------------------RDRSDETDGNEVPDSVHATAA---AGGR----------SRALQSRNFKAMVAWLSSSHAASAVXXXXXXXXAAGALRSPRA--------------AADPADK-------TLLEIALERQDGGPATAFMTLMSLAPEALA--EEAEAEANEPLALALRLYHGASTWRRISRDPPPR--RQGPGSRLHPDDPGLAAAVDEADDCERRRRSGAEHAGALALLSAGLAVSLRDAGAKGSGGRQGKSGQRDD---------------LEDPDLLAALALREALTASETRSLAKALILG----DTSSSLRREPGSSSXXX-----------XXXXXXXXXXXXAAVEG------------KDETCRELEEWLTRPEDAAKRRRRLSRAARQAAEDLAAGRTEGDGEGGATAV-------------VVLRLTDEAQEAIHRVHVAFFAAARHGPQDVLAVLREGLDEGVVFAGAAATGAG---------------------------------GHEAKGSS--------------------------------RG---VAGKGRK--RPAPRVLSCVEAFGEYYKLVSLSDAMELAAGAGDPGLAYGSLHEASTALLPSGCPLCRRNHLRHRTVSAD-------------------------------------SVDGRGAA-LTRTTTTPPS-HCDICELSARVV 685          
BLAST of mRNA_H-paniculata_contig2859.7786.1 vs. uniprot
Match: D7FLL1_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL1_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 3.050e-80
Identity = 299/908 (32.93%), Postives = 368/908 (40.53%), Query Frame = 0
Query:   58 KIFHYFGTGLSDACSSLTKDRTPEVSSVRAGVVGNGEMGKGGSGXXXXXXXXXNGTGTANQGSSTQHAVIVKCAVGTVAAAPPASSPAPTPSWGKIVDPRRQGRWQLLRCVQDGGGDGGVGQVGRGRGNPTAWARRSYSVGYMPVFQDSRAPGIGSTSGGTWGWASQSQVFGGSRACIGAHPMLAGGIVAVCEDTGGIGGGDDGDTEMGRQDLEVEMELEDSSGDTTVEGTAGYRLLAGVAEKKGNRNFQARNFRIMHTWLSGTLSSTVTFPGRISFYPPSFVCSSSSXXXXXXXXVEPDETAAAKGDTQNPINSPSLLEVALIDRDGGVAAAFMTLSSMDPILVGR--GDDAMLRENDPVVLALRLYHGASTWRRLSRRPTPRQSRQGSGSRVHPNNLAMAAATDKAEARDRAR---SDYESALALIQAGLAVSFADAGSRKSGCIRRRGDENFDGVGKXXXXXXXXXXXXXEIDELAALAIREVLTTAETRALAKGLGVSVSTTPTAMSERSSGGFGSRVWNRSETGGTGGGVXXXXXXXXSRDGSYEGNRRRHGRGGSDSKDEVCSAIEQWLSRPMDAAKRRARVARATQQASRLIGTVKGSSDRGGGSDDIDTVAGSEGVENVELVLRLADDVREAIHRIHVAFFAAARHGPHDALALLREDLAS-VFFGGADAVGCAAGTEKIYGDEEFPPLVERLASSIDEIITRNATRGNAARGADCSPTALPVEIDQAQLRVGCSHPQQDVVSVECGRGSPRVGGKGARGRYPPPAILSSAEIFSEFYRLTVLADDLDLAASSGDSSLAYRSLHEASTVLLPSGCPLCRRNRTRAVATGAERKSSRASVVEVAKRNAKVADGLKVARSAEAAGEGVMKAMDTSGAGFLPKVAAAPPTPHCDICELSARVV 959
            KIFHYFG G  +     T  + P  S+  AG  G                               Q  + V     TV       SP+P P+WGK+V+PR+Q RW++LR +Q GGG GGV        +PTAWARRSYS+ + PVFQD R PG+GSTSG  WGWASQSQVFGG+RAC  A P +         +  G  GGDD               + DS+  T V   AG R          +R  Q+RNF+ M  WLS + +++      ++   P+      SXXXXXXXX  P +               +LLE+AL  +DGG A AFMTL S+ P  +             +P+ LALRLYHGASTWRR+SR P PR  RQG GSR+HP+N  +AAA D+A+ R+R R   +++  ALAL+ AGLAVS  DAG++ SG  R       D                 + D L ALA RE LT   TR  A+ L                                                   G + R G GG+       +AI                                                         +VLRL D+ REAIHR+HVAFFAAARHGP DA  +LRE L   V F GA A G  A   K  G   F                                                                  V GKG R   P P +LS  E F+E+YRL  L+D ++LAA +GD  LAY SLHEAST L PSGCPLCRRN  R                                          + A    G              HCDICELSARVV
Sbjct:   53 KIFHYFGAGSPE---KGTPRKKPATSTPAAGAAGE----------------------------VPQPVLRVTEPAKTV-------SPSPAPTWGKLVEPRKQQRWEMLRRLQ-GGGLGGV--------DPTAWARRSYSLSHTPVFQDLRPPGMGSTSG--WGWASQSQVFGGARACR-ASPSVP------PRERSGETGGDD---------------VPDSARATVV--AAGGR----------SRALQSRNFKAMVAWLSSSHAASAV---AVAAPVPAAAGXPRSXXXXXXXXANPADK--------------TLLEIALERQDGGPATAFMTLMSLAPEALEEEXXXXXXXXXXEPLALALRLYHGASTWRRISRDPPPR--RQGPGSRLHPDNPGLAAAVDEADDRERRRRSGAEHAGALALLSAGLAVSLRDAGAKGSGGRRGTSGRRDD---------------LEDPDPLVALAPREALTA--TRQAAEDL-------------------------------------------------VAGRKERDGEGGA-------AAI---------------------------------------------------------VVLRLTDEAREAIHRVHVAFFAAARHGPQDAPVVLREGLDDGVVFAGAAATG--ADGHKAKGSSRF------------------------------------------------------------------VAGKGRR--RPAPRVLSCVEAFAEYYRLVSLSDAMELAAGAGDPGLAYGSLHEASTALFPSGCPLCRRNHLR---------------------------------------HRTVTADSVDGGXXXXXXXXXXXXXHCDICELSARVV 619          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2859.7786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNP8_9PHAE3.540e-10337.52Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
D7FLL1_ECTSI3.050e-8032.93Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2859contigH-paniculata_contig2859:385..5023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2859.7786.1mRNA_H-paniculata_contig2859.7786.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2859 376..5023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2859.7786.1 ID=prot_H-paniculata_contig2859.7786.1|Name=mRNA_H-paniculata_contig2859.7786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=959bp
MSGDQTSTPKQRGSTGNGRTASNSKNKKVSRVTGAGDDSLSPNNDENNSS
SSSGKKCKIFHYFGTGLSDACSSLTKDRTPEVSSVRAGVVGNGEMGKGGS
GGSARSGIAGNGTGTANQGSSTQHAVIVKCAVGTVAAAPPASSPAPTPSW
GKIVDPRRQGRWQLLRCVQDGGGDGGVGQVGRGRGNPTAWARRSYSVGYM
PVFQDSRAPGIGSTSGGTWGWASQSQVFGGSRACIGAHPMLAGGIVAVCE
DTGGIGGGDDGDTEMGRQDLEVEMELEDSSGDTTVEGTAGYRLLAGVAEK
KGNRNFQARNFRIMHTWLSGTLSSTVTFPGRISFYPPSFVCSSSSCSEMK
CSEVEPDETAAAKGDTQNPINSPSLLEVALIDRDGGVAAAFMTLSSMDPI
LVGRGDDAMLRENDPVVLALRLYHGASTWRRLSRRPTPRQSRQGSGSRVH
PNNLAMAAATDKAEARDRARSDYESALALIQAGLAVSFADAGSRKSGCIR
RRGDENFDGVGKGKGGGGCGGDGDGEIDELAALAIREVLTTAETRALAKG
LGVSVSTTPTAMSERSSGGFGSRVWNRSETGGTGGGVSGGGGSGSSRDGS
YEGNRRRHGRGGSDSKDEVCSAIEQWLSRPMDAAKRRARVARATQQASRL
IGTVKGSSDRGGGSDDIDTVAGSEGVENVELVLRLADDVREAIHRIHVAF
FAAARHGPHDALALLREDLASVFFGGADAVGCAAGTEKIYGDEEFPPLVE
RLASSIDEIITRNATRGNAARGADCSPTALPVEIDQAQLRVGCSHPQQDV
VSVECGRGSPRVGGKGARGRYPPPAILSSAEIFSEFYRLTVLADDLDLAA
SSGDSSLAYRSLHEASTVLLPSGCPLCRRNRTRAVATGAERKSSRASVVE
VAKRNAKVADGLKVARSAEAAGEGVMKAMDTSGAGFLPKVAAAPPTPHCD
ICELSARVV
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