prot_H-paniculata_contig2813.7679.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2813.7679.1
Unique Nameprot_H-paniculata_contig2813.7679.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A6G0W7J2_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7J2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.140e-19
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query:   11 VEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 135
             EP+N +EA + P+ +HWQ + + E+  LV NG W  VE P +  VVS   +YK K   EG ++K+K RLVA G  Q  GV F +  +P    AS +++  LAA     +R++D  QAYL+A  D
Sbjct: 1080 TEPRNAKEALSGPQAKHWQESMQAELDGLVANGTWEVVERPPSGNVVSHKWVYKIKYDREGQIDKFKARLVARGFTQRYGVEFSKTFAPVIKQASVRVIFALAATLKRTVRHLDFPQAYLKAETD 1204          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 91.3 bits (225), Expect = 9.920e-19
Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 0
Query:   12 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 130
            EP++  EAQASPEW  W++A + E   L   G W   + P ++  V    +++RK  +EG V KYK RLVA G  QI G+ F E  +P     S + +L LA +  WE+  +D++ AYL
Sbjct:  906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYL 1024          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: J6ERE3_TRIAS (Gag-Pol n=1 Tax=Trichosporon asahii var. asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC 7840 / NBRC 103889/ NCYC 2677 / UAMH 7654) TaxID=1186058 RepID=J6ERE3_TRIAS)

HSP 1 Score: 90.1 bits (222), Expect = 2.510e-18
Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   12 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 135
            +PK   EA A P+ E W  A + EI  LV  G W + + P +K  V+   ++KRK   +GNV KYK RLV  G  QI GV F+E  +P   + S  ++L +AA    ELR  D+E AYL   +D
Sbjct:  890 DPKTVAEALALPDAEQWIEAMKKEIDNLVGKGTWSEAKLPKHKKAVTAKWVFKRKRDADGNVVKYKARLVGRGFSQIPGVDFEETYAPVGRSTSLLLILSIAARYNLELRQADVEGAYLNGTID 1013          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A1M2VH23_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VH23_TRAPU)

HSP 1 Score: 84.0 bits (206), Expect = 3.200e-18
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 0
Query:   12 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVD 124
            EP+   EAQASP+W HW+ A   EI  L ++  +  VE P+N  +V    +++ K   EG++ +YK RLVA G  Q+ G+ F E  +P    AS + +L LAA   WEL  +D
Sbjct:   12 EPRTLAEAQASPDWPHWENAIAKEIDNLRKHDTYDLVEPPHNTNIVGSRFVFRIKRDAEGSITQYKARLVAQGFTQMPGIDFNETFAPVAKLASIRTILALAARYDWELEQMD 124          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A177TJ72_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177TJ72_9BASI)

HSP 1 Score: 89.7 bits (221), Expect = 3.270e-18
Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 0
Query:    9 LPVEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 130
            + +EP   ++A   P+W  W  A + E+  L E G W+  E P+N+ VV    ++K K+  EGNV +YK RLVA G  Q+ GV + E  SP     + + +L LAA   W +  +D+  AYL
Sbjct:  286 IEIEPNTLKDAMRRPDWSLWLEAMKEEMNSLTEMGTWVLEELPDNQSVVGSRWVFKLKLDSEGNVARYKARLVAQGFSQVAGVNYNETYSPVTRFVTIRTLLALAAHFDWHVHQLDVVTAYL 407          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: UPI0005CA293A (uncharacterized protein LOC105350894 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005CA293A)

HSP 1 Score: 89.7 bits (221), Expect = 3.290e-18
Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 0
Query:   12 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 130
            EP +  +A  +PEW+   RAE   +  L  NG W  V  P +K  +    +YK K+  +GNVE+YK RLVA G  QI+GV ++E  +P     + +++L LA+IQGW L  +D+  A+L
Sbjct:  533 EPASFSQAVHNPEWQTAMRAE---VAALQSNGTWSLVPLPPHKRPIGCKWVYKVKLKPDGNVERYKARLVAKGYSQIEGVDYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFL 648          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A392MEN3_9FABA (Retrovirus-related pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MEN3_9FABA)

HSP 1 Score: 87.4 bits (215), Expect = 3.760e-18
Identity = 43/125 (34.40%), Postives = 74/125 (59.20%), Query Frame = 0
Query:   11 VEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 135
            +EPK + +A    + + W++A +IE+Q L +N  W+ VE P+ K  +    +YK K    G++E+YK RLVA G  Q +G+ + +  SP     + +++L LAAI+GW L  +D+  A+L   ++
Sbjct:  139 IEPKTYNQAS---KLDCWRKAMDIELQDLADNQTWIVVELPSGKVPIGCKWVYKIKYHANGSIERYKARLVAKGYTQTEGIDYCDIFSPVAKITTVRVLLALAAIKGWHLEQLDVNNAFLHGDLN 260          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A061GBS1_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061GBS1_THECC)

HSP 1 Score: 87.0 bits (214), Expect = 4.380e-18
Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   27 HWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 135
            HW+ A ++E++ L +NG W  V  P+N  V+    +YK K+   G +E+YK RLVA G  Q+ G  +QE  SP    ++ ++   LAA  GW L  +D+  A+    +D
Sbjct:  146 HWREAMDLELKALQDNGTWTIVPLPSNPHVIGCKWVYKIKMKANGEIERYKARLVAKGYSQVVGFDYQETFSPVAKQSTVRVFFALAAANGWSLSQLDINNAFFNGDLD 254          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 88.6 bits (218), Expect = 8.660e-18
Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   12 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 135
            EPK   EA+  P+W HW+ A + E+  L ENG W   + P  +  V    ++K K+  +G V+KYK RLVA G  Q  GV + E  +P    A+ ++++ LAA +GW    +D+  AYL   ++
Sbjct:  829 EPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLE 952          
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A2P6RCF4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RCF4_ROSCH)

HSP 1 Score: 87.8 bits (216), Expect = 1.590e-17
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 0
Query:   10 PVEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 130
            P+EPK+ R A + PEW+    A   EI  L++ G W  V  P  K +V    +YK K   +G++ +YK RLVA G  Q KG+ + E  SP    ++ ++++ LAA+  WELR +D++ A+L
Sbjct:  630 PIEPKSFRAAASIPEWDE---AMYEEIDALLKQGTWELVPLPKAKNIVGSKWIYKIKKNPDGSISRYKARLVAQGFSQEKGLDYDETFSPVVRHSTVRLVVALAAMNKWELRQLDVKNAFL 747          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0W7J2_9STRA1.140e-1940.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GYH9_9APHY9.920e-1939.50Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
J6ERE3_TRIAS2.510e-1841.13Gag-Pol n=1 Tax=Trichosporon asahii var. asahii (s... [more]
A0A1M2VH23_TRAPU3.200e-1839.82Retrovirus-related Pol polyprotein from transposon... [more]
A0A177TJ72_9BASI3.270e-1836.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0005CA293A3.290e-1839.50uncharacterized protein LOC105350894 n=1 Tax=Fraga... [more]
A0A392MEN3_9FABA3.760e-1834.40Retrovirus-related pol polyprotein from transposon... [more]
A0A061GBS1_THECC4.380e-1835.78Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A5C3E5T1_9BASI8.660e-1836.29Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A2P6RCF4_ROSCH1.590e-1738.02Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..135
e-value: 1.5E-13
score: 51.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..131
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 11..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2813contigH-paniculata_contig2813:5093..5500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2813.7679.1mRNA_H-paniculata_contig2813.7679.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2813 5093..5500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2813.7679.1 ID=prot_H-paniculata_contig2813.7679.1|Name=mRNA_H-paniculata_contig2813.7679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MPEELRSDLPVEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVEC
PNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPA
PAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like