mRNA_H-paniculata_contig2807.7669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2807.7669.1
Unique NamemRNA_H-paniculata_contig2807.7669.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 3.510e-95
Identity = 149/262 (56.87%), Postives = 191/262 (72.90%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQ--PLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW 4147
            LA L +LGRGNC     Q+S MS  T Q  FHKFCK+F+ E++DEH++LP EQ   L+ VM +YDRLGF+GA+GS DV HI W  CP +LARSYTGKEG  T+ YQ TV+H+GR +AVT+GF  +TNDK+ + +D  V+ +R D  Y ++TF +YNEDGT T  KG YLLVD+GYHKW +LM P ++ LS  +  +SK L+ VRKDVECFFG+LKG FRI K  + Y E+E IDN+FF CCILHN+LH  DG+D L ++  W
Sbjct:  100 LAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLW 361          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 3.600e-95
Identity = 148/262 (56.49%), Postives = 191/262 (72.90%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
            LA L +L RGNC  +   MS +S  TA   FH+F + F+ E++ EH+FLP     +KVM +YDRLGF+GA GSTDV HI W  CP + ARSYTGKEG+ T+AYQ TVDH+ RVLAVT GF G+TNDKSIIRYD AV  +REDP+Y ++ F +Y  DGT  + KG YLLVD+GYHKW  L+ P ++ +   +  +SK L+ VRKDVECFFG++KGRFRILK  I Y ++EDIDN+FF CCILHN+LH++D    +E++ +W G
Sbjct:  160 LACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAG 421          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 2.770e-91
Identity = 145/262 (55.34%), Postives = 188/262 (71.76%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
            LA L +L RGN   +   MS +S  T    FH+FCK F+AEL+DE+V+LP  + L KVM +YDR+GF GAVGSTDV HI W  CP + AR YTGKEG  T+A+Q TVDHSGRVLAVT+GF GATNDK+IIRYD AV  +R DP+Y ++ ++LY +DG + E KG YLLVD+GYHKW  L+ P +  +   +  +SK L+  RKDVEC+FG+LKGRFRI K  I + ++E IDN+FF CCILHN+LH+ D    + ++ +W G
Sbjct:   85 LACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 346          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 2.600e-90
Identity = 153/290 (52.76%), Postives = 194/290 (66.90%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQP--LEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYK----------------------------DRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW 4147
            LA L +LGRGNC     QMS MS  T Q  FHKFC++F+ E++DE + LP E+   L+ VM +YDRLGFTGAVGS DV HI W  CP + ARSYTGKEGF TIAYQ TVDH+GR +AVT+GF G+TNDK+I+ +D AV+ +  D  Y                             ++TF +YNEDGT T  KG YLLVD+GYHKW +L+ P ++ LS  +  +SK L+ VRKDVECFFG+LKGRFRILK  + Y+ +E IDN+FF C ILHN+LH  DG+D L ++ +W
Sbjct:   87 LAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNW 376          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 4.320e-90
Identity = 145/262 (55.34%), Postives = 188/262 (71.76%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
            LA L +L RGN   +   MS +S  T    FH+FCK F+AEL+DE+V+LP  + L KVM +YDR+GF GAVGSTDV HI W  CP + AR YTGKEG  T+A+Q TVDHSGRVLAVT+GF GATNDK+IIRYD AV  +R DP+Y ++ ++LY +DG + E KG YLLVD+GYHKW  L+ P +  +   +  +SK L+  RKDVEC+FG+LKGRFRI K  I + ++E IDN+FF CCILHN+LH+ D    + ++ +W G
Sbjct:  176 LACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 437          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 8.100e-90
Identity = 143/264 (54.17%), Postives = 191/264 (72.35%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQ--PLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
            LA L +LGRGN       +S MS  T Q  FH+FC++F+ E++DEH+FLP E+   L++VM +Y++LGF GA+GSTDV HI W  CP +  RSYTGKEG  T+ YQ TV+H+GRVLAVT+GF G+TNDK+II  D AV  +R D  Y ++ F ++ +DGT    KG YL+VD+GYHKW ML+ P ++ LS  +  +SK L+ VRKDVECFFG+LK RFRILK  + Y+++E +D +FF CCILHN+LH HDG+  LE+D +W G
Sbjct:  129 LACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG 392          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 8.640e-87
Identity = 137/257 (53.31%), Postives = 182/257 (70.82%), Query Frame = 2
Query: 3383 VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
            VLG+GNC ++  Q+S MS+S AQ  FHKFC++F+AE+FDEH++LP    L++VM  + +LG+TGA GSTDV HI W+ CP +L RS+TGKEGF TIAY  TVDH GR LAVT GF GATNDK+IIRYD  V  +R    Y +R ++L   +GT+   +G +L+VD+GYH+W  L+ P ++    E+T +S+ L+ VRKDV CF        RILK  + Y ++E +DNIFF CCILHN+LH  DGLDV E++ DW G
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTG 291          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.210e-84
Identity = 143/271 (52.77%), Postives = 183/271 (67.53%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQP--LEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW-RGCTVGTT 4171
            LA L +LG+GNC     QMS MS  T Q  FHKFC+ F+ E++DEH+ LP E+   L  VM +YDRLG                 CP + ARSYTGK+ F TIAYQ TVDH+ R +AVT+GF G+TNDK+I+ +D AV  +R D  Y ++TF LYNEDGT T  KG Y L D+GYHKW +L+ P ++ LS ++  +SK L+ VRKDVECFFG+LKGRFRILK  + Y+ +E IDN+FF CCILHN+LH  DG+D L ++ +W     VGTT
Sbjct:   22 LAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 275          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 1.170e-81
Identity = 128/230 (55.65%), Postives = 170/230 (73.91%), Query Frame = 2
Query: 3491 LFDEHVFLPKEQP--LEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW-RGCTVGTT 4171
            ++DEH+ LP E+   L+ V+ +YDRLGFTGA+GS DV HI W  CP + ARSYTGKEGF TI YQ TVDH+GR +AVT+GF G+TNDK+ + +D AV+ +R D  Y ++TF +YN+DGT T  KG Y+LVD+GYHKW +L+ P ++ LS  +  +SK L+ VRKDVECFFG+LKGR RIL   + ++ +E IDN+FF CCILHN+LH  DG+D L ++ +W     VGTT
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 230          
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.680e-79
Identity = 131/241 (54.36%), Postives = 172/241 (71.37%), Query Frame = 2
Query: 3383 VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILH 4105
            VLG+GNC ++  Q+S MSES AQ  FHKFC++ +AE+FDEH++LP    L++VM  + +LG TGA GSTDV HI  + CP +L RS+TGKEGF TIAY+ TVDH+GR LAVT GF G TNDK+ IRYD  V  +R +  Y +R ++L   +GT    +G +L+VD+GY++            S E+T +S+ L+ VRKDVECFFG+LKGRFRILK  + Y ++E IDNIFF CCILHN+LH
Sbjct:  139 VLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLH 367          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHI0_9PHAE3.510e-9556.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE3.600e-9556.49Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE2.770e-9155.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.600e-9052.76DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JPH7_9PHAE4.320e-9055.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE8.100e-9054.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE8.640e-8753.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE1.210e-8452.77DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI1.170e-8155.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSI7_9PHAE1.680e-7954.36DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2807contigH-paniculata_contig2807:8334..13494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.0
Seed ortholog evalue1.2e-72
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size4721
Cds size852
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2807.7669.1prot_H-paniculata_contig2807.7669.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2807 11755..13046 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929851.4894893-UTR-H-paniculata_contig2807:8333..117541622929851.4894893-UTR-H-paniculata_contig2807:8333..11754Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2807 8334..11754 +
1691481039.5093863-UTR-H-paniculata_contig2807:8333..117541691481039.5093863-UTR-H-paniculata_contig2807:8333..11754Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2807 8334..11754 +
1622929851.540724-UTR-H-paniculata_contig2807:13046..134941622929851.540724-UTR-H-paniculata_contig2807:13046..13494Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2807 13047..13494 +
1691481039.5408297-UTR-H-paniculata_contig2807:13046..134941691481039.5408297-UTR-H-paniculata_contig2807:13046..13494Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2807 13047..13494 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929851.505068-CDS-H-paniculata_contig2807:11754..122251622929851.505068-CDS-H-paniculata_contig2807:11754..12225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2807 11755..12225 +
1691481039.5213475-CDS-H-paniculata_contig2807:11754..122251691481039.5213475-CDS-H-paniculata_contig2807:11754..12225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2807 11755..12225 +
1622929851.522426-CDS-H-paniculata_contig2807:12665..130461622929851.522426-CDS-H-paniculata_contig2807:12665..13046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2807 12666..13046 +
1691481039.5318096-CDS-H-paniculata_contig2807:12665..130461691481039.5318096-CDS-H-paniculata_contig2807:12665..13046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2807 12666..13046 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2807.7669.1

>prot_H-paniculata_contig2807.7669.1 ID=prot_H-paniculata_contig2807.7669.1|Name=mRNA_H-paniculata_contig2807.7669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp
MSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFT
GAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTK
GFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLL
VDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRI
LKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRGCTVGTT
PKLLISRRTTVGSGSGTTSAAARYKKWNRTTTC*
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mRNA from alignment at H-paniculata_contig2807:8334..13494+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2807.7669.1 ID=mRNA_H-paniculata_contig2807.7669.1|Name=mRNA_H-paniculata_contig2807.7669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5161bp|location=Sequence derived from alignment at H-paniculata_contig2807:8334..13494+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TAGGGCGGTCGAGGGGGAGGCGTTAATGGCGTACGAGGTTGTCCAGGATC TGGTTCCTCGGGGAGGGGCGTCGGGTCACGCCTTCGACAGACCTGGCCGA CGACGCGGGCAGCTGGACGGGAGAGAGAGGCAAGATGCGAAGACGGACGG GGACGAAGGCATGGTGCTGGATGCGGCTGTGGCAGCGAGCTCCCGAGGCT GGCCTTGCGAGGAACTCGCTGCGGCTGTTGTTCGACGGAGGTGGTGCGCG GGGTACGGGCTATGGGGCTGCCATGCACTTACGTCCTACACACCGTGTCG GCGCCTAACATACTGGAACGCTCGCCGGCGTTGGGCCCGCTTTGCTTCCC GTACCCAGGGTGCGGGGCGAGGCACGACCGTCAATCAGTGCTGGAGTACG TCGTGCAAGAACACCCGAGCAGCCGTGAGAGGGTAGAGGCGCTCGGCAGA GTGTGTGGTGGCGATAGCCCCGCAGTCAGGCCGGGACGCCTCTTCGCCTG GGATCAGAATAGCCTGGGTATAGCGGGACCTCTGGATCGCTACACGGTCG CTGACTTCAAACAATGACACGAGACGGTCGTCCGAGTGAAACACGGTCTC CAACCCCACCTAGGACAACTCTTTCTGCACTGCCCGGACCTTCTGAACCA CGAAGTGAGCCAGCACCGGACGCTGGGAGCAGAGACACCACTATCCTTGC CGCGGCTGGTGAAGCTCGACCACGTTCTCCAGGCGCTGCTTCTATCTTCC GACGGACACTTCTCCAGGAGGGACAGGTTCTTCGAAGTGAAGAGAGAGGA CATCAGCATCTTGCTCTCACGGCTCATGGCGTACACAGAGGCCGCGGCGG CCTGCCGCCGGTCGACGGCGAGGAGCACATCTACGGCGGACCGACACAGG AAGGCGGCAGCTGCGTGGTATCTCTATCGCAGCGAGAGCCTTTGTTGTCG GATGAACTCGCGCCGGCCAACGAGGATACCTTCCATAAAGTCAGCGCGAA ATTCGGCCAGGAGGATGAACCCGCGCTGGCAGCGGCGAAAGCAGCTTCCA TAGCAGCAAGCCGGGATTCGCTCGCCGCGGGCGGAGATGCCGCCTGGAGG CCAGACGACGAATATATCCCCGAAACGCTGATAGCGGTTGTGAAGTCCAA GAATACCCTGTCCGCGGCGGGTAACGATGGCCTGCATTTCTCCCATCTGC AGTGCACCCTGAACACCTCAGCGGGCAAGGAAGGTTTTGGTCCCGTTGTC CGGTCTTTCTGGCGTCGCTACATCGAACAACTCGACGCCTTCCCGCCGGA GTTCTAGGAGTTGTTCGTCCAAACAACCTAATGGCACACGGGGAAAAGTG CCGCCCGATTTGCGTGGGATGTACGATGAAGCGTACTTTGGTCACTGGGG TGGTCAGGTAGAACAGGCCGAAACGGGAGGAGGTTAACTTGTCGGAGCGG CAATATCGGGTAGCGGTATCGGGCGGCGTGGAGCTCATGGACCTCCGTGC GAAAGCACACCACCAATTGGAGCATTGGCTTATCGCCCTCGACTGTACCA ATGTATTCAACTCCGTCAAGCGGGCGGCGATCTTGGAAGAAATGGCCATC CGCACCCCGGGACTGGCACCTTTCGTAGCCTCATGCTATGGGGAAAAGCC GGCAAAGATCCTTTTCCAAATGGACACCGGTGAACGCAGGAAAATCTCTT CGAAGACGGGAATCCGCCAGGGCGACGGACTGGGATCCGCCCTCCTCTGC ATGCCCGTGGGACCGATCTTGCGCAAGTGCCGAGAACAATTCGAGGCTCT GGGGGTAGAGCTGTTGACCTACCTGGACGATCTAGTGCTGGCAATGGAGA AGCTGACGAAAGAAATTTTACGGGTAATCCGTTTTCTCGTCCAAGAGCTA GCATGCATAGGAGTGCAGATTAACAACGCCAAGACGACGGTGGTGCCCCC AATGAACCACATTCCCATCAAAAGGGAGATCGCTGCACTGGCGGCGATGG GCATCAGCATCGCAAAGGGAGGGGAGGCTATGGTGGTGGGTACACCGATT GGGACCGAGGCATTCGTTCAGCAGCACGCCGTCACCGTAGTCAAGGAAAA GGAGGCAGGGCACCTTGCGCGCCTACTAGCGCATATGCCCGACAAACAGG CAGCGATGCTGATCGCCACGAATTCCAGGGCCCTGAAGATCTGCTTCCTG GAGAGAGTGATGGACGCCAAATTCTCTGACCAAGCTTGCACACTAACCGA CAATGGCGGACTATGGATGTTGAAGAACATTCTGGAACACTACCTTTTCT CGGTTTCGGTTACCTCCTAGCATCTTCAGGATCTGATTGTATCGCTTAAA GAGGCTCTGCCACACCCTCACTAAGGTTGGCGCGTCGTACGTGTCATACA TGCTCTTTACCCCCTCCACAACGCCGTCTATCGTACCGTAACGCTTCCTC CAAACCCTACTTTTCAGAGATGCAAAGAGCCCTAAGTCGTTGCTTTTGAC ATCTGGCGACTGCGCAGGCTGAGTTACAAGATTGACGCACCACCTCCCGA CCTTCCCTAGTTCGTTGGTCTTCGGCGGCGTGTGTTTTCCCTTGTGGTGG GGTCGCTCCGTCCTACTGCGCGACCACTTCCTCACCCTCCAACCACGGCG TCTTTTCCTCCAATGCTAGGAGAACAGAATCCTTGTACCACTCCTGGTAT CACTCGGCGTCAATGGTCACGTCGAACTCGTATTGCTGCCCACGTTCACG CCTGGACGAATTCCTCTGCGTCTGCTTGATGACGTATTCGAGTTGCGTCT AACTTTCAGTAACCGTAGCTCCTGTTGTGGGTTCTGGGAACGTTCCTTGT GTAATAGTTTATTTTATATAGATCTCCGGATGGTTTCAATTTGTTTCAGT ACGGGGTATTTTAGGGGGTGAATTGGGTGTTTGACTTATGTTGGGGTATG CACCTCCTTACTGGTTTCATCTCTCCCGAGATAATAAACACGTGTTCTAC CACGACCATAGCCTACCGCCCAAAGATATCAAACACGCTAGCGAGGTCGT TGACGATCTTAGCCGACATGGCAGAGCCCTGTGGAACGGGGGGTGACGAT CTCCCGGGTAGCTTGGAAAATATAATTCCGAGAACTGGAACGTCTACTGT TGACGCACGAGACCACCTGTACTATACTATACTGTACTGTACTGTACTGT ACTGTACTGTACTGTACTGTACTGTACTGTCGGTAGGATGCACCGCAAAA AATATGTGATGTACCCTTTCACAGCGGTGCACCACCTCGCGAAGGGACCC CATGTACTCATCGAAGGGAGATCCCACATTTTGTGCGCGTGCCCCTCAAT CACCATAATGCCCGGCGCTCGCTGTTCTTTAGGTACTAGGTAGGGGAAAC TGCCTTGAAGAGACTTCTCAGATGTCCCTCATGAGCGAGTCGACGGCGCA AGTAGCATTCCACAAGTTCTGCAAGAACTTTTCGGCAGAGCTGTTCGATG AGCATGTCTTCCTGCCCAAGGAGCAGCCTCTCGAGAAAGTCATGCACGAG TATGACCGCTTGGGGTTCACCGGGGCCGTCGGCTCAACTGATGTTGTCCA CATCAAATGGGACTGCTGCCCGTGCTCCTTGGCACGTTCTTACACGGGTA AGGAGGGATTCGCGACCATCGCATACCAAGCGACGGTCGATCATAGCGGT CGCGTCCTTGCCGTCACGAAGGGCTTTCCTGGGGCTACCAACGACAAGTC AATCATCCGTTACGACCTGGCGGTGCAGATGGTTCGCGAGGATCCCATGT ACAAAGACAGGACGTTCAGGCTCTACAACGAGGACGGCACAAGGACCGAG CACAAGGGTGTCTATCTGCTTGTGGACAGTGGGTATCATAAGGTGAGTGT GATACGAGTAACGTTACATTTTGGTCCGAAGTGTACGTAAAGGCTATATG ACACGGGCGACATGATCCCCCGAGAAGCATATTGTTTCGTCATTGCCGTC AATAAAGGCCACGGTTTAATGCAGCCCAAACGTGTGCGCGCACAAGACAT GAGAAGCACGCTACATATCGCTGTCAGCACTAGGTCGCGAATTAATTTTA CCACGCCGTCTAAACTAGCGGGACTGATAACCTACAAACACACACACCCA TATAAAAAAGGAGCTCCAACAAAATATTGCATTATATGTTTCCTATAACC TGGTAGCATTGCTGTTTACCCGTCGAACGGGGCGACAACGGCCCCCGCGT GAGAAGCGAATAGACATCAATGCCCGCTCCGTGCAAACCCAACCCTACGT CGCCCACTCCACTGGGTTTCATTTTCACACAGTGGGCTATGCTCATGCGC CCGGAGAGGTTCGCCTTATCTGGCGAGGAGACGCGCTGGAGCAAGTCGTT GGACAGAGTACGAAAGGATGTGGAATGCTTCTTCGGCGTCCTGAAGGGTC GCTTCAGAATCCTCAAATTCCCCATCCTCTACCGCGAAAAAGAGGACATC GACAACATCTTCTTCGCATGCTGCATCCTCCACAACATTCTGCACGCTCA CGACGGATTGGACGTACTGGAGAAAGACGCGGACTGGAGGGGGTGCACGG TCGGCACGACCCCGAAGTTGCTGATCTCGAGACGGACCACAGTCGGGTCG GGATCAGGCACAACTTCGGCCGCAGCGAGGTACAAGAAGTGGAATCGGAC CACCACGTGCTGAAGAAAAAGTTGATCGCACACTTCTCATACCGCAGGCA GATGAATGACATCACATGGCTTGCTAGGTAGACGCTGTGGTCATAGCCGT ACTGAACGCGGTCCACACGCCTGGTTGCATAGTCGATAGTGCAGAAGGAG TGTTTGCTTTGGTTTGTTGTATATCTTCCAGCGACTAGTGTCGTTGCTTC CGCAGGTTGGACAGGATAGGCAGTGAATGTTTTATTGTAAACTTAATATT GTCACGCGCAGCTGCGTTTTACGACTTCGGTGTTGATATTTTTACACCGA CATTCGAGTGTGTTGACGGAGCTGTTGAGAAGACGTATTTATTGGGTTTT TTTAAACAGTTGAGGGCCAAAACGTATGGAGGTTTACCTGCTTACAGCCA TAAGGCCACTTCTTATGAGGCCTGGATATCCGTTCAAAATTGGATATTTG CAAACAACCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig2807:8334..13494+

>mRNA_H-paniculata_contig2807.7669.1 ID=mRNA_H-paniculata_contig2807.7669.1|Name=mRNA_H-paniculata_contig2807.7669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1704bp|location=Sequence derived from alignment at H-paniculata_contig2807:8334..13494+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCCTCATGAGCGAGTCGACGGCGCAAGTAGCATTCCACAAGTTCTG
CAAGAACTTTTCGGCAGAGCTGTTCGATGAGCATGTCTTCCTGCCCAAGG
AGCAGCCTCTCGAGAAAGTCATGCACGAGTATGACCGCTTGGGGTTCACC
GGGGCCGTCGGCTCAACTGATGTTGTCCACATCAAATGGGACTGCTGCCC
GTGCTCCTTGGCACGTTCTTACACGGGTAAGGAGGGATTCGCGACCATCG
CATACCAAGCGACGGTCGATCATAGCGGTCGCGTCCTTGCCGTCACGAAG
GGCTTTCCTGGGGCTACCAACGACAAGTCAATCATCCGTTACGACCTGGC
GGTGCAGATGGTTCGCGAGGATCCCATGTACAAAGACAGGACGTTCAGGC
TCTACAACGAGGACGGCACAAGGACCGAGCACAAGGGTGTCTATCTGCTT
GTGGACAGTGGGTATCATAAGATGTCCCTCATGAGCGAGTCGACGGCGCA
AGTAGCATTCCACAAGTTCTGCAAGAACTTTTCGGCAGAGCTGTTCGATG
AGCATGTCTTCCTGCCCAAGGAGCAGCCTCTCGAGAAAGTCATGCACGAG
TATGACCGCTTGGGGTTCACCGGGGCCGTCGGCTCAACTGATGTTGTCCA
CATCAAATGGGACTGCTGCCCGTGCTCCTTGGCACGTTCTTACACGGGTA
AGGAGGGATTCGCGACCATCGCATACCAAGCGACGGTCGATCATAGCGGT
CGCGTCCTTGCCGTCACGAAGGGCTTTCCTGGGGCTACCAACGACAAGTC
AATCATCCGTTACGACCTGGCGGTGCAGATGGTTCGCGAGGATCCCATGT
ACAAAGACAGGACGTTCAGGCTCTACAACGAGGACGGCACAAGGACCGAG
CACAAGGGTGTCTATCTGCTTGTGGACAGTGGGTATCATAAGTGGGCTAT
GCTCATGCGCCCGGAGAGGTTCGCCTTATCTGGCGAGGAGACGCGCTGGA
GCAAGTCGTTGGACAGAGTACGAAAGGATGTGGAATGCTTCTTCGGCGTC
CTGAAGGGTCGCTTCAGAATCCTCAAATTCCCCATCCTCTACCGCGAAAA
AGAGGACATCGACAACATCTTCTTCGCATGCTGCATCCTCCACAACATTC
TGCACGCTCACGACGGATTGGACGTACTGGAGAAAGACGCGGACTGGAGG
GGGTGCACGGTCGGCACGACCCCGAAGTTGCTGATCTCGAGACGGACCAC
AGTCGGGTCGGGATCAGGCACAACTTCGGCCGCAGCGAGGTACAAGAAGT
GGAATCGGACCACCACGTGCTGATGGGCTATGCTCATGCGCCCGGAGAGG
TTCGCCTTATCTGGCGAGGAGACGCGCTGGAGCAAGTCGTTGGACAGAGT
ACGAAAGGATGTGGAATGCTTCTTCGGCGTCCTGAAGGGTCGCTTCAGAA
TCCTCAAATTCCCCATCCTCTACCGCGAAAAAGAGGACATCGACAACATC
TTCTTCGCATGCTGCATCCTCCACAACATTCTGCACGCTCACGACGGATT
GGACGTACTGGAGAAAGACGCGGACTGGAGGGGGTGCACGGTCGGCACGA
CCCCGAAGTTGCTGATCTCGAGACGGACCACAGTCGGGTCGGGATCAGGC
ACAACTTCGGCCGCAGCGAGGTACAAGAAGTGGAATCGGACCACCACGTG
CTGA
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