mRNA_H-paniculata_contig2807.7669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 323 bits (827), Expect = 3.510e-95 Identity = 149/262 (56.87%), Postives = 191/262 (72.90%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQ--PLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW 4147
LA L +LGRGNC Q+S MS T Q FHKFCK+F+ E++DEH++LP EQ L+ VM +YDRLGF+GA+GS DV HI W CP +LARSYTGKEG T+ YQ TV+H+GR +AVT+GF +TNDK+ + +D V+ +R D Y ++TF +YNEDGT T KG YLLVD+GYHKW +LM P ++ LS + +SK L+ VRKDVECFFG+LKG FRI K + Y E+E IDN+FF CCILHN+LH DG+D L ++ W
Sbjct: 100 LAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLW 361
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 326 bits (836), Expect = 3.600e-95 Identity = 148/262 (56.49%), Postives = 191/262 (72.90%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
LA L +L RGNC + MS +S TA FH+F + F+ E++ EH+FLP +KVM +YDRLGF+GA GSTDV HI W CP + ARSYTGKEG+ T+AYQ TVDH+ RVLAVT GF G+TNDKSIIRYD AV +REDP+Y ++ F +Y DGT + KG YLLVD+GYHKW L+ P ++ + + +SK L+ VRKDVECFFG++KGRFRILK I Y ++EDIDN+FF CCILHN+LH++D +E++ +W G
Sbjct: 160 LACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAG 421
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 312 bits (800), Expect = 2.770e-91 Identity = 145/262 (55.34%), Postives = 188/262 (71.76%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
LA L +L RGN + MS +S T FH+FCK F+AEL+DE+V+LP + L KVM +YDR+GF GAVGSTDV HI W CP + AR YTGKEG T+A+Q TVDHSGRVLAVT+GF GATNDK+IIRYD AV +R DP+Y ++ ++LY +DG + E KG YLLVD+GYHKW L+ P + + + +SK L+ RKDVEC+FG+LKGRFRI K I + ++E IDN+FF CCILHN+LH+ D + ++ +W G
Sbjct: 85 LACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 346
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 311 bits (796), Expect = 2.600e-90 Identity = 153/290 (52.76%), Postives = 194/290 (66.90%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQP--LEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYK----------------------------DRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW 4147
LA L +LGRGNC QMS MS T Q FHKFC++F+ E++DE + LP E+ L+ VM +YDRLGFTGAVGS DV HI W CP + ARSYTGKEGF TIAYQ TVDH+GR +AVT+GF G+TNDK+I+ +D AV+ + D Y ++TF +YNEDGT T KG YLLVD+GYHKW +L+ P ++ LS + +SK L+ VRKDVECFFG+LKGRFRILK + Y+ +E IDN+FF C ILHN+LH DG+D L ++ +W
Sbjct: 87 LAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNW 376
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 312 bits (800), Expect = 4.320e-90 Identity = 145/262 (55.34%), Postives = 188/262 (71.76%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
LA L +L RGN + MS +S T FH+FCK F+AEL+DE+V+LP + L KVM +YDR+GF GAVGSTDV HI W CP + AR YTGKEG T+A+Q TVDHSGRVLAVT+GF GATNDK+IIRYD AV +R DP+Y ++ ++LY +DG + E KG YLLVD+GYHKW L+ P + + + +SK L+ RKDVEC+FG+LKGRFRI K I + ++E IDN+FF CCILHN+LH+ D + ++ +W G
Sbjct: 176 LACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 437
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 310 bits (794), Expect = 8.100e-90 Identity = 143/264 (54.17%), Postives = 191/264 (72.35%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQ--PLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
LA L +LGRGN +S MS T Q FH+FC++F+ E++DEH+FLP E+ L++VM +Y++LGF GA+GSTDV HI W CP + RSYTGKEG T+ YQ TV+H+GRVLAVT+GF G+TNDK+II D AV +R D Y ++ F ++ +DGT KG YL+VD+GYHKW ML+ P ++ LS + +SK L+ VRKDVECFFG+LK RFRILK + Y+++E +D +FF CCILHN+LH HDG+ LE+D +W G
Sbjct: 129 LACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG 392
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 298 bits (763), Expect = 8.640e-87 Identity = 137/257 (53.31%), Postives = 182/257 (70.82%), Query Frame = 2
Query: 3383 VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADWRG 4153
VLG+GNC ++ Q+S MS+S AQ FHKFC++F+AE+FDEH++LP L++VM + +LG+TGA GSTDV HI W+ CP +L RS+TGKEGF TIAY TVDH GR LAVT GF GATNDK+IIRYD V +R Y +R ++L +GT+ +G +L+VD+GYH+W L+ P ++ E+T +S+ L+ VRKDV CF RILK + Y ++E +DNIFF CCILHN+LH DGLDV E++ DW G
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTG 291
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 290 bits (743), Expect = 1.210e-84 Identity = 143/271 (52.77%), Postives = 183/271 (67.53%), Query Frame = 2
Query: 3368 LAVL*VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQP--LEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW-RGCTVGTT 4171
LA L +LG+GNC QMS MS T Q FHKFC+ F+ E++DEH+ LP E+ L VM +YDRLG CP + ARSYTGK+ F TIAYQ TVDH+ R +AVT+GF G+TNDK+I+ +D AV +R D Y ++TF LYNEDGT T KG Y L D+GYHKW +L+ P ++ LS ++ +SK L+ VRKDVECFFG+LKGRFRILK + Y+ +E IDN+FF CCILHN+LH DG+D L ++ +W VGTT
Sbjct: 22 LAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 275
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 280 bits (717), Expect = 1.170e-81 Identity = 128/230 (55.65%), Postives = 170/230 (73.91%), Query Frame = 2
Query: 3491 LFDEHVFLPKEQP--LEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILHAHDGLDVLEKDADW-RGCTVGTT 4171
++DEH+ LP E+ L+ V+ +YDRLGFTGA+GS DV HI W CP + ARSYTGKEGF TI YQ TVDH+GR +AVT+GF G+TNDK+ + +D AV+ +R D Y ++TF +YN+DGT T KG Y+LVD+GYHKW +L+ P ++ LS + +SK L+ VRKDVECFFG+LKGR RIL + ++ +E IDN+FF CCILHN+LH DG+D L ++ +W VGTT
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 230
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.680e-79 Identity = 131/241 (54.36%), Postives = 172/241 (71.37%), Query Frame = 2
Query: 3383 VLGRGNCLEETSQMSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTGAVGSTDVVHIKWDCCPCSLARSYTGKEGFATIAYQATVDHSGRVLAVTKGFPGATNDKSIIRYDLAVQMVREDPMYKDRTFRLYNEDGTRTEHKGVYLLVDSGYHKWAMLMRPERFALSGEETRWSKSLDRVRKDVECFFGVLKGRFRILKFPILYREKEDIDNIFFACCILHNILH 4105
VLG+GNC ++ Q+S MSES AQ FHKFC++ +AE+FDEH++LP L++VM + +LG TGA GSTDV HI + CP +L RS+TGKEGF TIAY+ TVDH+GR LAVT GF G TNDK+ IRYD V +R + Y +R ++L +GT +G +L+VD+GY++ S E+T +S+ L+ VRKDVECFFG+LKGRFRILK + Y ++E IDNIFF CCILHN+LH
Sbjct: 139 VLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLH 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2807.7669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2807.7669.1 >prot_H-paniculata_contig2807.7669.1 ID=prot_H-paniculata_contig2807.7669.1|Name=mRNA_H-paniculata_contig2807.7669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp MSLMSESTAQVAFHKFCKNFSAELFDEHVFLPKEQPLEKVMHEYDRLGFTback to top mRNA from alignment at H-paniculata_contig2807:8334..13494+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2807.7669.1 ID=mRNA_H-paniculata_contig2807.7669.1|Name=mRNA_H-paniculata_contig2807.7669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5161bp|location=Sequence derived from alignment at H-paniculata_contig2807:8334..13494+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2807:8334..13494+ >mRNA_H-paniculata_contig2807.7669.1 ID=mRNA_H-paniculata_contig2807.7669.1|Name=mRNA_H-paniculata_contig2807.7669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1704bp|location=Sequence derived from alignment at H-paniculata_contig2807:8334..13494+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |