mRNA_H-paniculata_contig28020.7662.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: D7G4Y6_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y6_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.560e-55 Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 1
Query: 52 KYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
+YYDNTVFHR+IRKFMVQGGDPTGTGKGGES+YGKPFRDEIHTR+KFNHRGQVAMANEN P TNHSQFFFTLD+A HLDKKHTIFGKV
Sbjct: 10 QYYDNTVFHRIIRKFMVQGGDPTGTGKGGESVYGKPFRDEIHTRIKFNHRGQVAMANENEPRTNHSQFFFTLDSAAHLDKKHTIFGKV 97
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: A0A6H5K904_9PHAE (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K904_9PHAE) HSP 1 Score: 176 bits (445), Expect = 9.910e-50 Identity = 78/87 (89.66%), Postives = 84/87 (96.55%), Query Frame = 1
Query: 55 YYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
YYDNT+FHR+IRKFMVQGGDPTGTGKGGES+YGKPFRDEIHTR+KFNHRGQVAMANEN P TNHSQFFFTLD+A HLDKKHTIFGK+
Sbjct: 80 YYDNTIFHRIIRKFMVQGGDPTGTGKGGESVYGKPFRDEIHTRIKFNHRGQVAMANENEPRTNHSQFFFTLDSAAHLDKKHTIFGKI 166
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: A0A835YS24_9STRA (Cyclophilin-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS24_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.200e-43 Identity = 74/101 (73.27%), Postives = 84/101 (83.17%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
PRA L + YYDNTVFHR+I KFMVQGGDPTGTGKGG+SI+GKPF+DE H+R+KFNHRGQVAMANEN+P TN SQFFFTLD A L+ KHTIFGK+
Sbjct: 34 PRACRNFLQLAMEGYYDNTVFHRIISKFMVQGGDPTGTGKGGDSIWGKPFKDECHSRIKFNHRGQVAMANENTPNTNRSQFFFTLDKADWLNGKHTIFGKI 134
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: A0A2P4XDN1_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDN1_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.340e-41 Identity = 69/101 (68.32%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
P+A + L YYD T+FHR+I FMVQGGDPTG+G GGESIYG F DE H+R+KFNHRG +AMANEN P TNHSQFFFTLD LDKKHTIFGKV
Sbjct: 34 PKACRNFVQLCLEGYYDKTIFHRIISGFMVQGGDPTGSGNGGESIYGGAFVDEFHSRLKFNHRGLLAMANENKPNTNHSQFFFTLDACDFLDKKHTIFGKV 134
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: A0A7S3HSD9_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSD9_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.690e-40 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 43 TLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
+L YYD+T+ HR+++ FMVQ GDPTGTG GG+SI+G+PF+DE H R+KFNHRGQVAMANEN+P TN SQFF TLD LD+KHTIFGKV
Sbjct: 31 SLEGYYDSTIVHRIVKGFMVQMGDPTGTGTGGKSIWGRPFKDEAHGRIKFNHRGQVAMANENAPNTNQSQFFITLDACEWLDRKHTIFGKV 121
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: H3G7X8_PHYRM (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7X8_PHYRM) HSP 1 Score: 140 bits (352), Expect = 1.690e-40 Identity = 66/101 (65.35%), Postives = 76/101 (75.25%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
P+A + L YYD T+FHR+I FMVQGGDPTGTG GGES+Y F DE H+R++FNHRG +AMANEN P +NHSQFFFTLD LDKKHTIFGKV
Sbjct: 20 PKACRNFVQLCLEGYYDQTIFHRIIASFMVQGGDPTGTGDGGESVYEGAFIDEFHSRLRFNHRGLLAMANENKPNSNHSQFFFTLDACDFLDKKHTIFGKV 120
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: F0YDY1_AURAN (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDY1_AURAN) HSP 1 Score: 141 bits (355), Expect = 4.410e-40 Identity = 67/101 (66.34%), Postives = 76/101 (75.25%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
PRA + L YYD T FHRVI FM QGGDPTGTG+GG+S++GKPFRDE H R++FNHRGQ+AMANEN P TN +QFFFTLD LD KHTIFG V
Sbjct: 34 PRACRNFVQLALEGYYDRTCFHRVIPGFMAQGGDPTGTGEGGDSVWGKPFRDETHARIRFNHRGQLAMANENRPDTNRAQFFFTLDACSWLDGKHTIFGTV 134
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: D0NHA6_PHYIT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NHA6_PHYIT) HSP 1 Score: 139 bits (351), Expect = 4.500e-40 Identity = 67/101 (66.34%), Postives = 76/101 (75.25%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
P+A + L YYD T+FHR+I FMVQGGDPTGTG GGESIY F DE H+R+KFNHRG +AMANEN P +NHSQFFFTLD L+KKHTIFGKV
Sbjct: 34 PKACRNFVQLCLEGYYDQTIFHRIIAGFMVQGGDPTGTGTGGESIYSGAFIDEFHSRLKFNHRGLLAMANENKPNSNHSQFFFTLDACDFLNKKHTIFGKV 134
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: A0A067CHT7_SAPPC (PPIase cyclophilin-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHT7_SAPPC) HSP 1 Score: 147 bits (371), Expect = 5.290e-40 Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
P+A + + YYDNT+FHR+I FM+QGGDPTG+G GGESIYG+PF DE H+R++FNHRG +AMAN N P TN SQFFFTLDN LD+KHTIFGKV
Sbjct: 34 PKAVRNFIQLAMEHYYDNTIFHRIIANFMIQGGDPTGSGDGGESIYGEPFTDEFHSRLRFNHRGLLAMANSNKPNTNKSQFFFTLDNCDFLDRKHTIFGKV 134
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Match: A0A329S713_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S713_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.410e-39 Identity = 70/101 (69.31%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 13 PRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYGKPFRDEIHTRVKFNHRGQVAMANENSPGTNHSQFFFTLDNAPHLDKKHTIFGKV 315
P+A + L YYD T+FHR+I FMVQGGDPTGTG+GGESIYG F DE H+R+KFNHRG +AMANEN P TNHSQFFFTLD LDKKHTIFGKV
Sbjct: 34 PKACRNFVQLCLEGYYDQTIFHRIIASFMVQGGDPTGTGQGGESIYGGAFIDEFHSRLKFNHRGLLAMANENKPNTNHSQFFFTLDACDFLDKKHTIFGKV 134 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28020.7662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28020.7662.1 >prot_H-paniculata_contig28020.7662.1 ID=prot_H-paniculata_contig28020.7662.1|Name=mRNA_H-paniculata_contig28020.7662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp PAPPPRARAISLSSTLPKYYDNTVFHRVIRKFMVQGGDPTGTGKGGESIYback to top mRNA from alignment at H-paniculata_contig28020:2356..2670+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28020.7662.1 ID=mRNA_H-paniculata_contig28020.7662.1|Name=mRNA_H-paniculata_contig28020.7662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=315bp|location=Sequence derived from alignment at H-paniculata_contig28020:2356..2670+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28020:2356..2670+ >mRNA_H-paniculata_contig28020.7662.1 ID=mRNA_H-paniculata_contig28020.7662.1|Name=mRNA_H-paniculata_contig28020.7662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at H-paniculata_contig28020:2356..2670+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |