mRNA_H-paniculata_contig27896.7619.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 295 bits (756), Expect = 5.720e-96 Identity = 143/250 (57.20%), Postives = 180/250 (72.00%), Query Frame = 1
Query: 4 PYRQVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQDLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
P+ QVLA LQ+L RGN F DI MS + TV FH+FCK +AEL+DE+++LPTG+DL KVM +YDR+GF GA+GSTDVTHI W C + AR YTGKEG T+A+Q VDHSGR+L VT+GF GATNDK+IIRYD AV +R D VY+++ ++LY +DG E KG YLL W L+P SK I + +SK LES RKDVEC+FG+LKGRFR+ +L I + ++E DNVFF CCILH+ML
Sbjct: 80 PHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNML 329
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 293 bits (750), Expect = 4.340e-94 Identity = 142/247 (57.49%), Postives = 176/247 (71.26%), Query Frame = 1
Query: 13 QVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQDLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
+VLA LQ+L RGNCF DI MS + T FH+F + + E++ EHIFLPTG +KVM +YDRLGF+GA GSTDVTHI W C + ARSYTGKEG+ T+AYQ VDH+ R+L VT GF G+TNDKSIIRYD AV +RED +YS++ F +Y DGT + KG YLL W L+P SK+ I + +SK LESVRKDVECFFG++KGRFR+L+L I Y ++E DNVFF CCILH+ML
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNML 404
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 291 bits (744), Expect = 5.300e-93 Identity = 141/247 (57.09%), Postives = 178/247 (72.06%), Query Frame = 1
Query: 13 QVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQDLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
+VLA LQ+L RGN F DI MS + TV FH+FCK +AEL+DE+++LPTG+DL KVM +YDR+GF GA+GSTDVTHI W C + AR YTGKEG T+A+Q VDHSGR+L VT+GF GATNDK+IIRYD AV +R D VY+++ ++LY +DG E KG YLL W L+P SK I + +SK LES RKDVEC+FG+LKGRFR+ +L I + ++E DNVFF CCILH+ML
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNML 420
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 278 bits (712), Expect = 1.560e-89 Identity = 133/249 (53.41%), Postives = 179/249 (71.89%), Query Frame = 1
Query: 13 QVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQ--DLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
+VLA L +LGRGNCF I Q+S M TVQ FHKFCK+ + E++DEHI+LP+ Q +L+ VM +YDRLGF+GA+GS DVTHI W C + ARSYTGKEG T+ YQ V+H+GR + VT+GF +TNDK+ + +D V+ +R D+ Y+++TF +YN+DGT+T KG YLL W +LM +K+ + + +SK LESVRKDVECFFG+LKG FR+ ++ + Y E+E DNVFF CCILH+ML
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNML 346
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 272 bits (695), Expect = 2.350e-86 Identity = 141/277 (50.90%), Postives = 181/277 (65.34%), Query Frame = 1
Query: 13 QVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQD--LEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYS----------------------------DRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
+VLA L +LGRGNCF I QMS M TVQG FHKFC++ + E++DE I LPT + L+ VM +YDRLGFTGA+GS DVTHI W C + ARSYTGKEGF TIAYQ VDH+GR + VT+GF G+TNDK+I+ +D AV+ + D Y+ ++TF +YN+DGT+T KG YLL W +L+ SK+ + + +SK LESVRKDVECFFG+LKGRFR+L+L + Y+ +E DNVFF C ILH+ML
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNML 361
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 268 bits (684), Expect = 1.400e-85 Identity = 127/235 (54.04%), Postives = 169/235 (71.91%), Query Frame = 1
Query: 28 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQDLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLLWAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
L+VLG+GNCFDD+ Q+S M ES Q FHKFC++ +AE+FDEHI+LPTG L++VM + +LG TGA GSTDVTHI + C + RS+TGKEGF TIAY+ VDH+GR L VT GF G TNDK+ IRYD V +R +S Y++R ++L +GT +G +L+ + + E+T +S+ LESVRKDVECFFG+LKGRFR+L+L + Y ++E DN+FF CCILH+ML
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLI-----VDNGYYESNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNML 366
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.940e-83 Identity = 129/249 (51.81%), Postives = 176/249 (70.68%), Query Frame = 1
Query: 13 QVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQ--DLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
+VLA L +LGRGN F I +S M TVQ FH+FC++ + E++DEHIFLP+ + +L++VM +Y++LGF GA+GSTDVTHI W C + RSYTGKEG T+ YQ V+H+GR+L VT+GF G+TNDK+II D AV +R D Y+++ F ++ KDGT+ KG YL+ W ML+ SK+ + + +SK LESVRKDVECFFG+LK RFR+L+L + Y+++E D VFF CCILH+ML
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNML 375
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 256 bits (653), Expect = 6.510e-81 Identity = 126/243 (51.85%), Postives = 165/243 (67.90%), Query Frame = 1
Query: 25 VLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQDLEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
V QVLG+GNCFDD+ Q+S M +S Q FHKFC++ +AE+FDEHI+LPTG L++VM + +LG+TGA GSTDVTHI W+ C + RS+TGKEGF TIAY VDH GR L VT GF GATNDK+IIRYD V +R S Y++R ++L +GT +G +L+ W L+ SK+ E+T +S+ LESVRKDV CF R+L+L + Y ++E DN+FF CCILH+ML
Sbjct: 40 VPQVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNML 274
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 251 bits (641), Expect = 1.260e-79 Identity = 128/249 (51.41%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 13 QVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDEHIFLPTGQD--LEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
QVLA L +LG+GNCF I QMS M TVQG FHKFC+ + E++DEHI LP + L VM +YDRLG C + ARSYTGK+ F TIAYQ VDH+ R + VT+GF G+TNDK+I+ +D AV +R D Y+++TF LYN+DGT+T KG Y L W +L+ SK+ + ++ +SK LESVRKDVECFFG+LKGRFR+L+L + Y+ +E DNVFF CCILH+ML
Sbjct: 20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNML 251
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 235 bits (599), Expect = 8.930e-74 Identity = 112/206 (54.37%), Postives = 149/206 (72.33%), Query Frame = 1
Query: 142 LFDEHIFLPTGQD--LEKVMHEYDRLGFTGAIGSTDVTHIKWDCCLCSFARSYTGKEGFTTIAYQAKVDHSGRILTVTKGFPGATNDKSIIRYDLAVQMVREDSVYSDRTFRLYNKDGTSTEHKGVYLL-------WAMLMPSSKHAICGEETRWSKTLESVRKDVECFFGVLKGRFRMLRLPILYREKEATDNVFFACCILHSML 732
++DEHI LPT + L+ V+ +YDRLGFTGA+GS DVTHI W C + ARSYTGKEGF TI YQ VDH+GR + VT+GF G+TNDK+ + +D AV+ +R D Y+++TF +YN+DGT+T KG Y+L W +L+ SK+ + + +SK LESVRKDVECFFG+LKGR R+L L + ++ +E DNVFF CCILH+ML
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNML 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27896.7619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27896.7619.1 >prot_H-paniculata_contig27896.7619.1 ID=prot_H-paniculata_contig27896.7619.1|Name=mRNA_H-paniculata_contig27896.7619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp APYRQVLAVLQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKNVSAELFDback to top mRNA from alignment at H-paniculata_contig27896:1722..2893+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27896.7619.1 ID=mRNA_H-paniculata_contig27896.7619.1|Name=mRNA_H-paniculata_contig27896.7619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1172bp|location=Sequence derived from alignment at H-paniculata_contig27896:1722..2893+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27896:1722..2893+ >mRNA_H-paniculata_contig27896.7619.1 ID=mRNA_H-paniculata_contig27896.7619.1|Name=mRNA_H-paniculata_contig27896.7619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig27896:1722..2893+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |