mRNA_H-paniculata_contig278.7604.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA) HSP 1 Score: 463 bits (1192), Expect = 6.160e-153 Identity = 264/421 (62.71%), Postives = 313/421 (74.35%), Query Frame = 2
Query: 344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHLPHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQ--GDSGAVISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
MAP ++ +PLLALLL S+T AFVTP + RG S S LP SV+ SST T + L ++ T + E + K ARLRETAA FRAQAAELE KR +ER+A A RSFN+FDSN+DG VD+ EL+AGL PLRRSF KQLTARMGRKP R+E+D IA LPGGSLFPDDLARKLI YD+N DG+LQ SEFAPTEELRT LE MFR+Q+E R ++LAA+ +GAV+ GVNDGPATAADK L+ LPYLLPL DG+++AGHLF A+PEQ A QPLA +LLA RSLPFATL+GFF LS+LS NPQ+NKLVRFNM+QAIN DIALI+PG+LGAL S SLG DAYKL PL EAGSDV+FVA+L AVAYS +S+ G FP+KLP G +NRENP++EE+
Sbjct: 1 MAPFTSSIIPLLALLLGSTT-AFVTP-TGRGASWS-LP--SVQQSSTFTAVARQAIRRSSPC-----LSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEE 411
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI) HSP 1 Score: 435 bits (1119), Expect = 5.190e-142 Identity = 256/420 (60.95%), Postives = 307/420 (73.10%), Query Frame = 2
Query: 344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHL-PHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEE 1597
MAP+ A VPL+ L + S+T AFVTP + RG S S P +VR+S++ + L +V +E E + A+LRETAA FRA+AAELE K+ ERR +A RSFNTFDSNKDG+VD+ EL+AGL PLRRSFTK L ARMGRKPS++EVD IA LPGG+LFPDDLA KLI YD+N DG+LQ SEFAPTEELRT LE +F +QRE+ER XXXXXX +R+ D+G V+ + G VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+PEQ A QPLA +LLA RS+PFATLIGFF LS S+NPQINKLVRFNM+QAIN DIALILPG++GA+T A LG DA KLAPL A SDV+FVALL AVAYS G+SA G FP+KLP G +NRENP+ +E
Sbjct: 1 MAPITATIVPLVTLFVGSTT-AFVTP-TGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMV-------SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRP--DAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 409
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI) HSP 1 Score: 394 bits (1013), Expect = 2.080e-126 Identity = 233/399 (58.40%), Postives = 279/399 (69.92%), Query Frame = 2
Query: 344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHL-PHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFG 1534
MAP+ A T+PLLAL L S+T AFV PI RG S S P R+VR+S++ + L +V ++ E K A+LRETAA FRA+ ERR +A RSFNTFDSNKDG+VD+ EL+AGL PLRRSFTK L ARMGRKPS++EVD IA LPGG+LFPD+LA KLI YD+N DG+LQ SEFAPTEELRT LE + +QRE ER +++ D+GAV+ + G VNDGPAT ADK L+ LPYLLPL DG+ +A HLF A+PEQ A QPLA +LLA RSLPFATLIGFF LS S+NP++NKLVRFNM+QAIN DIALILPG++GA+T LG DA KLAPL+ AGSDV+FVALL AVAYS G+SA G
Sbjct: 1 MAPLSATTIPLLALSLGSTT-AFVAPI-GRGASWSLANPQRAVRSSTSAAATRHNTLRRSSAMPATSSLRMV-------SKVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRP--DTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI) HSP 1 Score: 350 bits (897), Expect = 3.420e-109 Identity = 213/356 (59.83%), Postives = 257/356 (72.19%), Query Frame = 2
Query: 344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHL-PHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILG 1405
MAP+ A VPL+ L + S+T AFVTP + RG S S P +VR+S++ + L +V +E E + A+LRETAA FRA+AAELE K+ ERR +A RSFNTFDSNKDG+VD+ EL+AGL PLRRSFTK L ARMGRKPS++EVD IA LPGG+LFPDDLA KLI YD+N DG+LQ SEFAPTEELRT LE +F +QRE+ER XXXXXX +R+ D+G V+ + G VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+ EQ A QPLA +LLA RS+PFATLIGFF LS S+NPQINKLVRFNM+QAIN DIALILPG++G
Sbjct: 1 MAPITATIVPLVTLFVGSTT-AFVTP-TGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMV-------SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRP--DAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE) HSP 1 Score: 315 bits (808), Expect = 4.860e-96 Identity = 162/297 (54.55%), Postives = 215/297 (72.39%), Query Frame = 2
Query: 686 ANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINR 1576
A+RSF FDSNKDG V + EL+AGL PL+++FTKQLTARMGRKP+ +EV+ I ELPG +LFPDDLA +LI YD+N DGVLQ SEFAPTEELR LE +FRE+RE+E + +G + ++ AT+ +K L LPY+LPL+DG+ YA H+++ +P+QMA +PL IL+A +LPFATL+ FFG+S LS+N INKL+RFNM QAINFDIALI+P + G L + SLG DAYK++P+T+ +D++ V+L++AVAYS +SA G P+K+PFFG INR
Sbjct: 102 ADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE) HSP 1 Score: 287 bits (735), Expect = 1.030e-86 Identity = 165/302 (54.64%), Postives = 196/302 (64.90%), Query Frame = 2
Query: 698 FNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLS-SLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
FNTFDSNKDG+VD+ EL+AGL PLRR TK L ARMGRKPS++EVD IA LPGG+LFPD+LA KLI YD+N DG+LQ SEFAPTEELRT LE +F +QRE ER +++ D+GAV++ A QPLA +LLA RS+PFATLIGFF LS NPQ+NKLVRFN +QAIN DIALILPG++GA+ A LG DA KLAPL AGSDV+FVALL AVAYS G+SA G FP+KLP G +NRENP +++
Sbjct: 47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMRP--DTGAVVT-------------------------------------------AWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQE 303
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE) HSP 1 Score: 281 bits (718), Expect = 1.120e-84 Identity = 155/235 (65.96%), Postives = 185/235 (78.72%), Query Frame = 2
Query: 896 LIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAV-ISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEE 1597
L+ +YD+N DG+LQ SEFAPTEELRT LE +F +QRE+ER XXXXXX ++ D+GAV +S VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+PEQ A QPLA +LLA RS+PFATL+GFF LS S+NPQINKLVRFNM+QAIN DIALILPG++GA+T A LG DA KLAPL AGSDV+FVALL AVAYS G+SA G FP+KLP G +NRENP+ +E
Sbjct: 40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRP--DAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 272
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI) HSP 1 Score: 285 bits (728), Expect = 6.080e-84 Identity = 159/345 (46.09%), Postives = 217/345 (62.90%), Query Frame = 2
Query: 578 AETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGA----VISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
AE K A+LR AA R QA ELE+KR+ E++ A +F++FD+N DGTVD++EL AGL LR+ F K++T M RKPS EVD I+E+PGGSL P +LA+KLI +YD N DGVLQPSEFA ++R L+ +F ++ ++ R R A + A + + NDGP T DK+L+ LPY LPL D L + H+F +P Q++ L+PL ILL +RSLPF+ LI FFGL + P++NKLVRFN++QA+ DIA+ P I + ++ LG D+ KLAPL +DVIFV ++ V YS SSA G P+ LP G +NRE+ +ED
Sbjct: 81 AEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKED 425
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE) HSP 1 Score: 235 bits (599), Expect = 1.210e-68 Identity = 121/176 (68.75%), Postives = 142/176 (80.68%), Query Frame = 2
Query: 1073 DSGAV-ISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEE 1597
D+GAV +S VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+PEQ A +PL +LLA RS+PFATLIGFF LS S+NPQINKLVRFNM+QAIN DIALILPG++GA+T A LG DA KLAPL AGSDV+FVALL AVAYS G+SA G FP+KLP G +NRENP+ +E
Sbjct: 15 DAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 190
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE) HSP 1 Score: 221 bits (563), Expect = 7.430e-63 Identity = 128/256 (50.00%), Postives = 153/256 (59.77%), Query Frame = 2
Query: 836 DTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
D IA LPGG+LFPD+LA KLI YD N +G+LQ SEFAPTEELRT LE +F +QRE++R + + D+GAV+ + G VNDG AD L+ LPYLLPLADG+ +A HLF +PEQ A QPLA AIN DIALILPG++GA+ A LG DA KLAPL AGSDV+FVALL AVAYS G+SA G FP KLP G +NRENP E++
Sbjct: 21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRP--DAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENPGNEQE 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig278.7604.1 >prot_H-paniculata_contig278.7604.1 ID=prot_H-paniculata_contig278.7604.1|Name=mRNA_H-paniculata_contig278.7604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHLPHRSVRASSTRTRback to top mRNA from alignment at H-paniculata_contig278:34316..37356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig278.7604.1 ID=mRNA_H-paniculata_contig278.7604.1|Name=mRNA_H-paniculata_contig278.7604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3041bp|location=Sequence derived from alignment at H-paniculata_contig278:34316..37356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig278:34316..37356+ >mRNA_H-paniculata_contig278.7604.1 ID=mRNA_H-paniculata_contig278.7604.1|Name=mRNA_H-paniculata_contig278.7604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig278:34316..37356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |