mRNA_H-paniculata_contig278.7604.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig278.7604.1
Unique NamemRNA_H-paniculata_contig278.7604.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 463 bits (1192), Expect = 6.160e-153
Identity = 264/421 (62.71%), Postives = 313/421 (74.35%), Query Frame = 2
Query:  344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHLPHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQ--GDSGAVISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
            MAP  ++ +PLLALLL S+T AFVTP + RG S S LP  SV+ SST T  +               L ++   T +  E  + K ARLRETAA FRAQAAELE KR +ER+A A RSFN+FDSN+DG VD+ EL+AGL  PLRRSF KQLTARMGRKP R+E+D  IA LPGGSLFPDDLARKLI  YD+N DG+LQ SEFAPTEELRT LE MFR+Q+E  R            ++LAA+    +GAV+   GVNDGPATAADK L+ LPYLLPL DG+++AGHLF A+PEQ A  QPLA +LLA RSLPFATL+GFF LS+LS NPQ+NKLVRFNM+QAIN DIALI+PG+LGAL S SLG DAYKL PL EAGSDV+FVA+L AVAYS  +S+ G FP+KLP  G +NRENP++EE+
Sbjct:    1 MAPFTSSIIPLLALLLGSTT-AFVTP-TGRGASWS-LP--SVQQSSTFTAVARQAIRRSSPC-----LSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEE 411          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 435 bits (1119), Expect = 5.190e-142
Identity = 256/420 (60.95%), Postives = 307/420 (73.10%), Query Frame = 2
Query:  344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHL-PHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEE 1597
            MAP+ A  VPL+ L + S+T AFVTP + RG S S   P  +VR+S++   +                L +V       +E  E + A+LRETAA FRA+AAELE K+  ERR +A RSFNTFDSNKDG+VD+ EL+AGL  PLRRSFTK L ARMGRKPS++EVD  IA LPGG+LFPDDLA KLI  YD+N DG+LQ SEFAPTEELRT LE +F +QRE+ER     XXXXXX +R+    D+G V+ + G VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+PEQ A  QPLA +LLA RS+PFATLIGFF LS  S+NPQINKLVRFNM+QAIN DIALILPG++GA+T A LG DA KLAPL  A SDV+FVALL AVAYS G+SA G FP+KLP  G +NRENP+ +E
Sbjct:    1 MAPITATIVPLVTLFVGSTT-AFVTP-TGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMV-------SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRP--DAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 409          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 2.080e-126
Identity = 233/399 (58.40%), Postives = 279/399 (69.92%), Query Frame = 2
Query:  344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHL-PHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFG 1534
            MAP+ A T+PLLAL L S+T AFV PI  RG S S   P R+VR+S++   +                L +V       ++  E K A+LRETAA FRA+          ERR +A RSFNTFDSNKDG+VD+ EL+AGL  PLRRSFTK L ARMGRKPS++EVD  IA LPGG+LFPD+LA KLI  YD+N DG+LQ SEFAPTEELRT LE +  +QRE ER            +++    D+GAV+ + G VNDGPAT ADK L+ LPYLLPL DG+ +A HLF A+PEQ A  QPLA +LLA RSLPFATLIGFF LS  S+NP++NKLVRFNM+QAIN DIALILPG++GA+T   LG DA KLAPL+ AGSDV+FVALL AVAYS G+SA G
Sbjct:    1 MAPLSATTIPLLALSLGSTT-AFVAPI-GRGASWSLANPQRAVRSSTSAAATRHNTLRRSSAMPATSSLRMV-------SKVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRP--DTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 3.420e-109
Identity = 213/356 (59.83%), Postives = 257/356 (72.19%), Query Frame = 2
Query:  344 MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHL-PHRSVRASSTRTRSSXXXXXXXXXXXXXXXLMLVDNETETTAETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILG 1405
            MAP+ A  VPL+ L + S+T AFVTP + RG S S   P  +VR+S++   +                L +V       +E  E + A+LRETAA FRA+AAELE K+  ERR +A RSFNTFDSNKDG+VD+ EL+AGL  PLRRSFTK L ARMGRKPS++EVD  IA LPGG+LFPDDLA KLI  YD+N DG+LQ SEFAPTEELRT LE +F +QRE+ER     XXXXXX +R+    D+G V+ + G VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+ EQ A  QPLA +LLA RS+PFATLIGFF LS  S+NPQINKLVRFNM+QAIN DIALILPG++G
Sbjct:    1 MAPITATIVPLVTLFVGSTT-AFVTP-TGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMV-------SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRP--DAGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.860e-96
Identity = 162/297 (54.55%), Postives = 215/297 (72.39%), Query Frame = 2
Query:  686 ANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINR 1576
            A+RSF  FDSNKDG V + EL+AGL  PL+++FTKQLTARMGRKP+ +EV+  I ELPG +LFPDDLA +LI  YD+N DGVLQ SEFAPTEELR  LE +FRE+RE+E              +   +G   + ++        AT+ +K L  LPY+LPL+DG+ YA H+++ +P+QMA  +PL  IL+A  +LPFATL+ FFG+S LS+N  INKL+RFNM QAINFDIALI+P + G L + SLG DAYK++P+T+  +D++ V+L++AVAYS  +SA G  P+K+PFFG INR
Sbjct:  102 ADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 1.030e-86
Identity = 165/302 (54.64%), Postives = 196/302 (64.90%), Query Frame = 2
Query:  698 FNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLS-SLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
            FNTFDSNKDG+VD+ EL+AGL  PLRR  TK L ARMGRKPS++EVD  IA LPGG+LFPD+LA KLI  YD+N DG+LQ SEFAPTEELRT LE +F +QRE ER            +++    D+GAV++                                           A  QPLA +LLA RS+PFATLIGFF LS     NPQ+NKLVRFN +QAIN DIALILPG++GA+  A LG DA KLAPL  AGSDV+FVALL AVAYS G+SA G FP+KLP  G +NRENP  +++
Sbjct:   47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMRP--DTGAVVT-------------------------------------------AWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQE 303          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.120e-84
Identity = 155/235 (65.96%), Postives = 185/235 (78.72%), Query Frame = 2
Query:  896 LIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAV-ISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEE 1597
            L+ +YD+N DG+LQ SEFAPTEELRT LE +F +QRE+ER     XXXXXX  ++    D+GAV +S   VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+PEQ A  QPLA +LLA RS+PFATL+GFF LS  S+NPQINKLVRFNM+QAIN DIALILPG++GA+T A LG DA KLAPL  AGSDV+FVALL AVAYS G+SA G FP+KLP  G +NRENP+ +E
Sbjct:   40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRP--DAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 272          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 6.080e-84
Identity = 159/345 (46.09%), Postives = 217/345 (62.90%), Query Frame = 2
Query:  578 AETMESKVARLRETAATFRAQAAELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQLTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGA----VISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
            AE    K A+LR  AA  R QA ELE+KR+ E++  A  +F++FD+N DGTVD++EL AGL   LR+ F K++T  M RKPS  EVD  I+E+PGGSL P +LA+KLI +YD N DGVLQPSEFA   ++R  L+ +F ++ ++ R             R A +    A    +   +  NDGP T  DK+L+ LPY LPL D L +  H+F  +P Q++ L+PL  ILL +RSLPF+ LI FFGL   +  P++NKLVRFN++QA+  DIA+  P I   + ++ LG D+ KLAPL    +DVIFV ++  V YS  SSA G  P+ LP  G +NRE+   +ED
Sbjct:   81 AEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKED 425          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 1.210e-68
Identity = 121/176 (68.75%), Postives = 142/176 (80.68%), Query Frame = 2
Query: 1073 DSGAV-ISTDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEE 1597
            D+GAV +S   VNDGPAT ADK L+ LPY+LPLADG+ +A HLF A+PEQ A  +PL  +LLA RS+PFATLIGFF LS  S+NPQINKLVRFNM+QAIN DIALILPG++GA+T A LG DA KLAPL  AGSDV+FVALL AVAYS G+SA G FP+KLP  G +NRENP+ +E
Sbjct:   15 DAGAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQE 190          
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 7.430e-63
Identity = 128/256 (50.00%), Postives = 153/256 (59.77%), Query Frame = 2
Query:  836 DTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPSEFAPTEELRTHLEKMFREQREQERXXXXXXXXXXXTERLAAQGDSGAVISTDG-VNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLAVILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILPGILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFPDKLPFFGSINRENPNQEED 1600
            D  IA LPGG+LFPD+LA KLI  YD N +G+LQ SEFAPTEELRT LE +F +QRE++R            + +    D+GAV+ + G VNDG    AD  L+ LPYLLPLADG+ +A HLF  +PEQ A  QPLA                                       AIN DIALILPG++GA+  A LG DA KLAPL  AGSDV+FVALL AVAYS G+SA G FP KLP  G +NRENP  E++
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRP--DAGAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENPGNEQE 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig278.7604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6U1M4_SACJA6.160e-15362.71Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
D8LS19_ECTSI5.190e-14260.95EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI2.080e-12658.40EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS20_ECTSI3.420e-10959.83EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JY95_9PHAE4.860e-9654.55EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5JBJ0_9PHAE1.030e-8654.64EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KUU9_9PHAE1.120e-8465.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LTM8_ECTSI6.080e-8446.09TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
A0A6H5KVD7_9PHAE1.210e-6868.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCI4_9PHAE7.430e-6350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig278contigH-paniculata_contig278:34316..37356 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.0
Seed ortholog evalue5.1e-120
Seed eggNOG ortholog2880.D8LS19
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.protein transport
EggNOG OGs2BYWW@1,2QUSD@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2551
Cds size1263
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig278.7604.1prot_H-paniculata_contig278.7604.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig278 34659..36411 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929840.9690201-UTR-H-paniculata_contig278:34315..346581622929840.9690201-UTR-H-paniculata_contig278:34315..34658Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig278 34316..34658 +
1691481034.6117823-UTR-H-paniculata_contig278:34315..346581691481034.6117823-UTR-H-paniculata_contig278:34315..34658Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig278 34316..34658 +
1622929841.0099914-UTR-H-paniculata_contig278:36411..373561622929841.0099914-UTR-H-paniculata_contig278:36411..37356Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig278 36412..37356 +
1691481034.6364965-UTR-H-paniculata_contig278:36411..373561691481034.6364965-UTR-H-paniculata_contig278:36411..37356Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig278 36412..37356 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929840.981757-CDS-H-paniculata_contig278:34658..356751622929840.981757-CDS-H-paniculata_contig278:34658..35675Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig278 34659..35675 +
1691481034.6211014-CDS-H-paniculata_contig278:34658..356751691481034.6211014-CDS-H-paniculata_contig278:34658..35675Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig278 34659..35675 +
1622929840.9963737-CDS-H-paniculata_contig278:36165..364111622929840.9963737-CDS-H-paniculata_contig278:36165..36411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig278 36166..36411 +
1691481034.628757-CDS-H-paniculata_contig278:36165..364111691481034.628757-CDS-H-paniculata_contig278:36165..36411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig278 36166..36411 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig278.7604.1

>prot_H-paniculata_contig278.7604.1 ID=prot_H-paniculata_contig278.7604.1|Name=mRNA_H-paniculata_contig278.7604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MAPMIANTVPLLALLLASSTQAFVTPISNRGGSLSHLPHRSVRASSTRTR
SSTSSSSHRLTSSAAAVLMLVDNETETTAETMESKVARLRETAATFRAQA
AELETKREEERRAHANRSFNTFDSNKDGTVDLQELQAGLARPLRRSFTKQ
LTARMGRKPSRDEVDTHIAELPGGSLFPDDLARKLIAAYDRNCDGVLQPS
EFAPTEELRTHLEKMFREQREQEREARVAERERQMTERLAAQGDSGAVIS
TDGVNDGPATAADKVLATLPYLLPLADGLAYAGHLFAAYPEQMALLQPLA
VILLAFRSLPFATLIGFFGLSSLSNNPQINKLVRFNMKQAINFDIALILP
GILGALTSASLGHDAYKLAPLTEAGSDVIFVALLVAVAYSAGSSAFGEFP
DKLPFFGSINRENPNQEEDL*
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mRNA from alignment at H-paniculata_contig278:34316..37356+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig278.7604.1 ID=mRNA_H-paniculata_contig278.7604.1|Name=mRNA_H-paniculata_contig278.7604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3041bp|location=Sequence derived from alignment at H-paniculata_contig278:34316..37356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCACTTTTTCGCGCTCTGATTGGCCCATTTAAACATATGCGGGGCGTTA TACTGGCAATGACGCAATGACCTTCTCTGACGATGCAAGCAGAACGTTCC TTTCAACCATCATGAAGGAGCACACCACACTCAGCTTTTAGCTGCGTCTT CGACAGCACAGAGTGAGAAACACATCAGCTGCACCCCCATCGAAGATCAT CTATCCCACCCTTCACTCACTCTGCTCATCTACTCCAACAACAGTTGACG AAAGCTGCTCCAAACGACAGCTATCAACCGCATAAGGAGGTAACAACTGC AGCCCACGTACACTAACAACAGCAAGTGCGAACCCCAACCACCATGGCAC CCATGATCGCGAACACCGTGCCTCTCCTAGCCCTACTCTTAGCATCTTCA ACCCAAGCTTTCGTGACTCCCATCAGCAACCGTGGGGGCTCACTCTCCCA TCTACCACATCGATCAGTACGTGCGTCGTCAACCCGAACACGTTCGTCCA CCTCATCATCTAGTCATCGGTTGACCTCCTCCGCTGCAGCAGTCCTCATG CTTGTCGACAACGAGACCGAAACCACCGCCGAGACGATGGAGAGTAAGGT CGCGAGACTTCGCGAGACCGCCGCGACATTTCGTGCGCAGGCTGCCGAGC TCGAGACGAAGCGCGAGGAAGAACGCCGCGCCCACGCCAACCGCTCCTTC AACACCTTCGACTCCAACAAAGATGGTACGGTAGACCTTCAGGAGCTGCA GGCCGGCCTTGCCCGTCCCCTGCGTCGGAGCTTCACTAAGCAGCTCACGG CACGCATGGGCCGCAAGCCCAGCCGCGACGAGGTTGATACCCACATCGCT GAGCTCCCCGGCGGAAGCCTCTTCCCAGACGACTTGGCCCGAAAGCTGAT CGCCGCGTACGATCGAAACTGCGATGGAGTCCTACAGCCGTCAGAATTCG CGCCCACCGAGGAGCTGCGCACGCATCTCGAGAAGATGTTCCGCGAGCAG CGGGAGCAGGAGCGGGAGGCGAGGGTGGCCGAGCGGGAACGTCAAATGAC AGAACGTTTGGCAGCGCAGGGCGATTCAGGAGCGGTAATTTCGACGGATG GGGTGAACGACGGACCGGCGACCGCGGCGGACAAGGTCTTGGCTACGCTT CCGTACCTGTTGCCCCTGGCCGACGGGTTGGCATACGCGGGACACTTATT CGCGGCGTACCCTGAGCAGATGGCGTTGTTGCAGCCATTGGCGGTGATAT TGCTTGCTTTCCGGTCTTTGCCATTCGCCACTTTGATCGGGTTCTTCGGG CTATCTTCCTTGAGCAACAACCCCCAGATCAACAAGCTTGTACGTTTCAA CATGAAACAGGTGAGTAATATGGCATCGGTTTTTTTCGGTATCATACGAT ACAAGTCTGAGACCAGCCAAGCATATTCAGGACTATGGAATTGCCTCTCA TGTATCTGTCTCAGAGAATGCTGAACAACCCATGAATGGTGAGGGAAGTA AGGAAATTATATTTGTCCTACCGCTTGCTGCCATCTAAGACGCCCACTAA GTTACCAAGCGAGCCCATCCGTGTTATACCTACCACTATTTTTATAATTC CTGGTGTACGTGATGGACCCTCGTTTCCCGAATGCCAGCTTCTCTCCACA GATCGCAGGCACGGTTCCCTCGTTGCGTATAATCTCGCTTAAATCGGTGG GTACTGTTCATGTTTCTGCACGACATACTCCAAACCACTCACTGCCCTCC ACTCACCCATTCAACGCCATTATGGTGTGATACTCAACCCCCTATATCCT TCTGCCGTACCCCCCTGCCTTCCCTGCCCTTTCTCACCCCCTCCCTCCAG GCGATCAACTTTGACATTGCGCTCATCCTACCGGGAATCCTCGGGGCATT GACCTCTGCTTCCCTGGGCCACGACGCGTACAAGTTGGCCCCGCTTACTG AAGCTGGATCGGATGTGATCTTTGTAGCTCTGTTGGTGGCCGTAGCGTAC TCGGCGGGATCATCGGCGTTCGGAGAGTTCCCTGACAAGCTTCCGTTCTT CGGTAGTATAAACCGCGAGAACCCCAACCAGGAAGAGGATTTGTAACTAA CTGCGTTTAGTAGCAGTAGGGTGTATGGTTATTTTTTATCTGTGGGAACT TGGTTTGTTTTCTGCTAACATTCAGTCGGTGGTCAGGATTAGGTGTTAGG TGTGATAGGGCTGTGGTCGTAAGTAGTTGAACTTATTTTATGTTTTGTGT ATACTGTGGCGTGATGTTTGTTGCCAGATTTGTTGAAATATCATTGATTT TTGCTGCGATTAGTCGTACTATGTCTATTTTCAGTGTACCTTGAAGTAAC GGTGTTGGGAAACGAATGCCTTGTCGGTATGTTGTTTCAGGAGTATATAT ATTTGCGAGTGTTCAACAGTCATTTGCCGTCGGTATTTTGAACCCTTCTG GTCGAGTCCAAACGTTTCTCTATGGATCAGTCGTTGCGTATCACCAAAGA ATGCGTGTACGGACGACGTATTGCAGTATTCAGTATGCGTATTTCACTTC AATGAGAGGTTTGAACGGGAAGGTGGATGCGGGGCTGAGGGGTAAATGGG ACGCGTTACTTGTAGCGAAGATGCAAGTATGACCCCCCCCGAAACGTTTT GAACAAAACTATGCTTTCCTACGTCAGACGGTGATAATGTCGTACTTGTG TTCTTCGGTAAGATTAAAAGCGGCCCTACCGACAGGGTTCACCGACCTCT GTACTTCTTATCCTGCTGAACTTGTCAATGACGACGTTTACTGGCCGCCA TGTCCGTTTTTTGTTCGGTGTGGGATGTGTGATAATTACAGACTCACGAT ATATTATGTGTTTTTCAACAAAATATCGGTCAAGTATCGTTGTCCTCGAG TGAGCCCGAGAGAGGGTTTACCGACAGAACTCTATCCGCGCTTCGCTCTT GCTGAAGACGGCGTGACAATCCTCGCAAGTAGTGTCCCATATTTGTCAGG TGTGATATATTCTGCCAGTAGTCTACCTTTTTCATTTCCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig278:34316..37356+

>mRNA_H-paniculata_contig278.7604.1 ID=mRNA_H-paniculata_contig278.7604.1|Name=mRNA_H-paniculata_contig278.7604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig278:34316..37356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACCCATGATCGCGAACACCGTGCCTCTCCTAGCCCTACTCTTAGC
ATCTTCAACCCAAGCTTTCGTGACTCCCATCAGCAACCGTGGGGGCTCAC
TCTCCCATCTACCACATCGATCAGTACGTGCGTCGTCAACCCGAACACGT
TCGTCCACCTCATCATCTAGTCATCGGTTGACCTCCTCCGCTGCAGCAGT
CCTCATGCTTGTCGACAACGAGACCGAAACCACCGCCGAGACGATGGAGA
GTAAGGTCGCGAGACTTCGCGAGACCGCCGCGACATTTCGTGCGCAGGCT
GCCGAGCTCGAGACGAAGCGCGAGGAAGAACGCCGCGCCCACGCCAACCG
CTCCTTCAACACCTTCGACTCCAACAAAGATGGTACGGTAGACCTTCAGG
AGCTGCAGGCCGGCCTTGCCCGTCCCCTGCGTCGGAGCTTCACTAAGCAG
CTCACGGCACGCATGGGCCGCAAGCCCAGCCGCGACGAGGTTGATACCCA
CATCGCTGAGCTCCCCGGCGGAAGCCTCTTCCCAGACGACTTGGCCCGAA
AGCTGATCGCCGCGTACGATCGAAACTGCGATGGAGTCCTACAGCCGTCA
GAATTCGCGCCCACCGAGGAGCTGCGCACGCATCTCGAGAAGATGTTCCG
CGAGCAGCGGGAGCAGGAGCGGGAGGCGAGGGTGGCCGAGCGGGAACGTC
AAATGACAGAACGTTTGGCAGCGCAGGGCGATTCAGGAGCGGTAATTTCG
ACGGATGGGGTGAACGACGGACCGGCGACCGCGGCGGACAAGGTCTTGGC
TACGCTTCCGTACCTGTTGCCCCTGGCCGACGGGTTGGCATACGCGGGAC
ACTTATTCGCGGCGTACCCTGAGCAGATGGCGTTGTTGCAGCCATTGGCG
GTGATATTGCTTGCTTTCCGGTCTTTGCCATTCGCCACTTTGATCGGGTT
CTTCGGGCTATCTTCCTTGAGCAACAACCCCCAGATCAACAAGCTTGTAC
GTTTCAACATGAAACAGATGGCACCCATGATCGCGAACACCGTGCCTCTC
CTAGCCCTACTCTTAGCATCTTCAACCCAAGCTTTCGTGACTCCCATCAG
CAACCGTGGGGGCTCACTCTCCCATCTACCACATCGATCAGTACGTGCGT
CGTCAACCCGAACACGTTCGTCCACCTCATCATCTAGTCATCGGTTGACC
TCCTCCGCTGCAGCAGTCCTCATGCTTGTCGACAACGAGACCGAAACCAC
CGCCGAGACGATGGAGAGTAAGGTCGCGAGACTTCGCGAGACCGCCGCGA
CATTTCGTGCGCAGGCTGCCGAGCTCGAGACGAAGCGCGAGGAAGAACGC
CGCGCCCACGCCAACCGCTCCTTCAACACCTTCGACTCCAACAAAGATGG
TACGGTAGACCTTCAGGAGCTGCAGGCCGGCCTTGCCCGTCCCCTGCGTC
GGAGCTTCACTAAGCAGCTCACGGCACGCATGGGCCGCAAGCCCAGCCGC
GACGAGGTTGATACCCACATCGCTGAGCTCCCCGGCGGAAGCCTCTTCCC
AGACGACTTGGCCCGAAAGCTGATCGCCGCGTACGATCGAAACTGCGATG
GAGTCCTACAGCCGTCAGAATTCGCGCCCACCGAGGAGCTGCGCACGCAT
CTCGAGAAGATGTTCCGCGAGCAGCGGGAGCAGGAGCGGGAGGCGAGGGT
GGCCGAGCGGGAACGTCAAATGACAGAACGTTTGGCAGCGCAGGGCGATT
CAGGAGCGGTAATTTCGACGGATGGGGTGAACGACGGACCGGCGACCGCG
GCGGACAAGGTCTTGGCTACGCTTCCGTACCTGTTGCCCCTGGCCGACGG
GTTGGCATACGCGGGACACTTATTCGCGGCGTACCCTGAGCAGATGGCGT
TGTTGCAGCCATTGGCGGTGATATTGCTTGCTTTCCGGTCTTTGCCATTC
GCCACTTTGATCGGGTTCTTCGGGCTATCTTCCTTGAGCAACAACCCCCA
GATCAACAAGCTTGTACGTTTCAACATGAAACAGGCGATCAACTTTGACA
TTGCGCTCATCCTACCGGGAATCCTCGGGGCATTGACCTCTGCTTCCCTG
GGCCACGACGCGTACAAGTTGGCCCCGCTTACTGAAGCTGGATCGGATGT
GATCTTTGTAGCTCTGTTGGTGGCCGTAGCGTACTCGGCGGGATCATCGG
CGTTCGGAGAGTTCCCTGACAAGCTTCCGTTCTTCGGTAGTATAAACCGC
GAGAACCCCAACCAGGAAGAGGATTTGTAAGCGATCAACTTTGACATTGC
GCTCATCCTACCGGGAATCCTCGGGGCATTGACCTCTGCTTCCCTGGGCC
ACGACGCGTACAAGTTGGCCCCGCTTACTGAAGCTGGATCGGATGTGATC
TTTGTAGCTCTGTTGGTGGCCGTAGCGTACTCGGCGGGATCATCGGCGTT
CGGAGAGTTCCCTGACAAGCTTCCGTTCTTCGGTAGTATAAACCGCGAGA
ACCCCAACCAGGAAGAGGATTTGTAA
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