mRNA_H-paniculata_contig27765.7594.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A6H5JPV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPV6_9PHAE) HSP 1 Score: 224 bits (572), Expect = 9.930e-63 Identity = 140/399 (35.09%), Postives = 212/399 (53.13%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHE--------------SQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYLRSM-------------------------GFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSALLDTAATKE---------STTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 1050
+P D + TR+VFK+KAD +FKARLV G Q S R+L A+A W V+ LDV AFLN VY + APG E+ PTTG+ + + G+ T SDPC+Y S D +L+++VDDILITG +++ + +LM+ F +TD+GEV ++G+EV R+ + GTL +SQ Y +L+R+GM ANP TPG + +T LL T+ STTG +FFL GL+ + + + + A +T EAEL AL+ A++ Y+ N E+GF+ + + S++ GAL +A+N+ +S+R+KHIA+RF LR+ + + + + H SA + D + R F LR++V
Sbjct: 34 VPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGMSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILTIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDTQRFQAIIGSLLSTTGYLFFLGGGLISYGAKARTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFETFRSVPINSDSTGALTVASNAMFSSRTKHIALRFF-LRELTKGHWITLHHRHSATMIPDSEDRKRSREEFVALRTQV 431
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE) HSP 1 Score: 206 bits (523), Expect = 4.580e-56 Identity = 150/453 (33.11%), Postives = 217/453 (47.90%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQ---IHE-----------SQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTG-------------------------QPYLRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSALLDTAATK--ESTTGTMFFLANG----------------------------------------LVHFS-----------------PRLQKITATSTAEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 1062
+P KV+GTR+VFK KAD +FK RLVVQG Q I + S R+ A+A + W V+ +DV VAFL + + V+ K APG + P TG L +GF PT SDPC+Y GS DT ++L+L+V+DILI+G L+ D++ +L ++F ITD+GEV LILGM+V R+ + GTL +SQ YV S+LE GM + NP LL A +K +S TG++ +LA L+ F P +K T E+EL A++ AK+ YL ++ L F+ L + S++ G L LAAN+ +S+R+KHIA+RF L++ I+ + + HV + LADI TKH +R F + ++ FG
Sbjct: 420 VPKHEKVLGTRFVFKQKADERFKVRLVVQGHVQESGIDDGRRYARVCRIGSVRIFFAIACERGWPVWQMDVAVAFLQPTIDKDVWVKPAPGQDAKDPATGGIMVYKLERSLYGLAQSPVLWYDTIDEVLVVIGFRPTQSDPCVYIHGSGDTLVILTLYVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLILGMKVTRSYENGTLVVSQKGYVKSILESLGMENCNPPA--------------DELLGAAESKLYQSITGSLLYLAQCKRYDQSYAVNQLTRACSKPARAHTTAAKHALRYIRGTPDLLIIFKRGRFRVAAFADSSFGAIPDNRKSTTGLQVESELQAISYGAKEAAYLSSLLMALKFENLKPISIYSDSSGTLSLAANTMFSSRTKHIALRFFVLQESIKPRHIAVHHVPTQAMLADIATKHLDRNKFNSIIHQIKDFG 858
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A6H5KL30_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL30_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.200e-47 Identity = 122/410 (29.76%), Postives = 195/410 (47.56%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHESQ-RLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQ------------------------PYLRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSALLDTAATK--ESTTGTMFFLANGL--------------------VHF---SPRLQKITATSTAEA----ELIALAACAKQGTYLLNICRELGFQLDNFEVR--SNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 1062
+P K ++WVFK KA G FK RLV QGW+Q+ A W++F +D+ AFL ++ E+V +Q PGFE G P+L +GF P SD C+Y +D + L+L+VDD+L+ G +++ ++N+L + +TD+GEV L+LGME+ R+R +GTL SQ Y S+LERFGMS PT TPG ++ + + LL T+ + G + ++A L +H L+ + T+ +LIA K+ + N+ ELGF + +V +N LH N ++S+ +K IA+RF +R+ + ++ I ++ + +ADI TKH + L + +F
Sbjct: 811 VPPGRKREKSKWVFKRKAGGSFKRRLVAQGWNQVPGLDCGSTYAPPCNSTWSLFQMDLSTAFLCADILENVLVEQPPGFEVNGKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLQSDTCVYLYDHDDVQVFLTLYVDDLLLAGNNANVMLMIKNKLKQRSKMTDMGEVKLVLGMEIKRDRNQGTLTTSQEAYSKSILERFGMSERKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIMGCLMYIAQVLRYDIMYATGQLARPMTKPSKIHMVAAKHTLRYVAGTTDLRTRTTEKLIASVLAMKEAVFCSNMVSELGFGKEFAQVPLYCDNTATLHALGNRSFSSSTKRIALRFLYIRELVSEGRMSIHYIPTDSNIADIGTKHLNKHRLKHLLDNISSFN 1220
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY) HSP 1 Score: 182 bits (463), Expect = 1.860e-47 Identity = 131/442 (29.64%), Postives = 204/442 (46.15%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADG-----KFKARLVVQGWSQIH--------------ESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFE------------------KTHPTTG----QPYLRSMGFTPTISDPCIYSKGSND-TYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTP-------------------------------------------------GVKTDPTTTGE-DSALLDTAATKESTTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGFQLDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 1050
+P K IG +WV+K+K DG +++ARLVV+G++Q + R++LA+ D + LDV+ AFL+GEL+E +Y Q GFE K P ++ S+G+ SDPC+Y K D +I+L L+VDD+L+ GP + D++ QL +F + DLG + ILGM++ R+R + LSQ Y+ +L RF M P TP G +D T G DS +ST+G +F LA G V + +LQ I ATST EAE +A +K+ +L + ELG + + + +++ ALHLA N + +++KHI +++ +R+ + + I + + D LAD+LTK F RS +
Sbjct: 833 LPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPINNDKFIWCRSSL 1274
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A8J5YXK5_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YXK5_9ROSI) HSP 1 Score: 181 bits (460), Expect = 4.310e-47 Identity = 140/440 (31.82%), Postives = 211/440 (47.95%), Query Frame = 1
Query: 4 PSDHKVIGTRWVFKVK--ADGKF---KARLVVQGWSQIH--------------ESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFE------------------KTHPTTGQP----YLRSMGFTPTISDPCIY-SKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTP---GVKTDPTTTGED----------SALLDTAATK-----------------------------------ESTTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGF-QLDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 1050
P + KVIG +WVF+ K +DG KARLVV+G+SQ ++ R L ALA K W V LDV+ AFLNG L+E ++ +Q GFE K P YL +GFT +IS+P +Y K +T +++SL+VDD+L+TG D+L+ D + Q+ + F +TDLG ++ LGMEV N+ E + +SQ + L VL +F MS P TP G K T+ + LL AT+ +ST+G F L + + +S + Q+ A STAEAE IA A Q +L + +L Q++ E+ +N+ A+ +A N + ++KH I++ +R+ + ++ + H S DQLAD+LTK F LR ++
Sbjct: 731 PENRKVIGVKWVFRTKTNSDGSLNEHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQKQWKVHQLDVKSAFLNGFLKEEIFIEQPEGFEVSGEKHKVYRLKKALYGLKQAPRAWYDRIDVYLSRLGFTKSISEPTLYVKKDEKETLLIVSLYVDDLLVTGSKDELIEDFKKQMQDIFEMTDLGLMTYFLGMEV--NQGEQGIFISQQAFALKVLSKFSMSKCKPASTPVALGEKLSSTSEHDRVDERGYRSLVGCLLYLTATRPDILYTVGLLKFGRSKKLKLVGYSDSDWAGSVDDMKSTSGYFFSLGSSVFSWSSKKQQTVAQSTAEAEYIAAATAVNQAIWLRKLLDDLNARQMEATEINVDNQSAIAIAKNPVFHGKTKHFKIKYHFVREPELAKEICLVHCCSRDQLADVLTKPLAAGRFECLREEI 1168
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A6H5K066_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K066_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.090e-46 Identity = 117/370 (31.62%), Postives = 187/370 (50.54%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHE--------------SQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYL----RSM---------------------GFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSALLDTAATKESTTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQL 990
+P K++GT++VFK K DG+FKARLVV G Q S R+ A+ +W ++ LDV AFLN VY + APG + TG+P + RS+ G+ T SDPC+Y S + ++L+++VDDILI G +L+ + +L ++F +TD+GEV +LG++V RN ++GTL + + S +R G+ +K + T +D L LA GL+ + + Q +TA ST EAE+ AL A++ Y+ N+ EL F+ + + S++ GAL +A N+ +S R+KH+A+R+ +R+ + Q+ + H S QL
Sbjct: 18 VPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILIIGGDQQLVDQKKKELTDRFEMTDMGEVKRVLGIDVQRNYEQGTLAIHR-----STTQRGGLH---------LKFNDGTQLQDLRXL---------------LAGGLISYGAKAQALTAQSTVEAEIQALGYSAREAVYISNLMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQL 358
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A2N9IBB7_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IBB7_FAGSY) HSP 1 Score: 178 bits (451), Expect = 6.170e-46 Identity = 129/450 (28.67%), Postives = 202/450 (44.89%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADG-----KFKARLVVQGWSQIH--------------ESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFE------------------KTHPTTG----QPYLRSMGFTPTISDPCIYSKGSND-TYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTP-------GVKTDPTTTGE---------------------------------------------------DSALLDTAATKESTTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGFQLDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 1050
+P K IG +WV+K+K DG +++ARLVV+G++Q + R++LA+ D + LDV+ AFL+GEL+E +Y Q GFE K P ++ S+G+ SDPC+Y K D +I+L L+VDD+L+ GP + D++ QL +F + DLG + ILGM++ R+R + LSQ Y+ +L RF M P TP P+ E DS +ST+G +F LA G V + +LQ I ATST EAE +A +K+ +L + ELG + + + +++ ALHLA N + +++KHI +++ +R+ + + I + + D LAD+LTK F RS +
Sbjct: 678 LPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGVVSRYMVNPGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPINNDKFIWCRSSL 1127
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A8J5YXF9_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YXF9_9ROSI) HSP 1 Score: 172 bits (435), Expect = 9.010e-46 Identity = 133/439 (30.30%), Postives = 212/439 (48.29%), Query Frame = 1
Query: 10 DHKVIGTRWVFKVK--ADG---KFKARLVVQGWSQIH--------------ESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFE------------------KTHPTTG----QPYLRSMGFTPTISDPCIYSKGSND-TYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSALLDTAATK--------------------------------------------ESTTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGF-QLDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFGK 1065
+ KVIG RWVF+ K ADG K KARLVV+G+ Q + ++ +LL +LA K W + LDV+ AFLNG L+E +Y +Q GF+ K P YL +GF ++S+P +Y K S D T +++S++VDD+L+ G D L+ + + Q+ F +TDLG ++ GMEV N+ + + +SQ+ +VL +L++F M + P T + + ++ D ++ + +ST G F L + + +S + Q+I A STAEAE IA AA Q +L + +L Q D E+ +++ A+ +A N + ++KH I+F +R+ +S ++ + H S DQLADILTK F LR K++ G+
Sbjct: 17 EKKVIGVRWVFRAKFNADGSLNKHKARLVVKGYCQQYGVDFEETFAPVARLDTIKLLFSLAAQKKWQIHQLDVKSAFLNGFLKEEIYIEQPDGFQVQGQEDKVYRLKKALYGLKQAPRAWYNRVDAYLFKLGFEKSLSEPTLYVKKSKDGTLLIVSIYVDDLLVNGSKDVLVNEFKAQMQEVFDMTDLGIMTYFFGMEV--NQTDRGIFISQHAFVLKILDKFSMQNCKPVNTSMAQGEKLSSIGDHVRVNEKEYRSLGCQEGARYIKGTLRLGMLFKKEKELKLVGYSDSNWAGCIDDMKSTLGYFFTLGSSVFCWSSKKQQIVAQSTAEAEYIAAAAAVNQAIWLRKLLHDLNENQCDPTEIMVDDQSAVAIAKNPVFHGKTKHFKIKFHFVREAEQSKEVSLVHCCSQDQLADILTKPLGTARFETLR-KLIGLGR 452
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A8J6CM81_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CM81_9ROSI) HSP 1 Score: 169 bits (428), Expect = 5.970e-45 Identity = 127/397 (31.99%), Postives = 203/397 (51.13%), Query Frame = 1
Query: 10 DHKVIGTRWVFKVK--ADG---KFKARLVVQGWSQIH--------------ESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFE------------------KTHPTTG----QPYLRSMGFTPTISDPCIYSKGSND-TYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGED-------------SALLDTAATKESTTGTMFFLAN-----GLVHF---SPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGF-QLDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTK 1008
+ KVIG RWVF+ K ADG K KA+LVV+G+SQ + ++ +LL ALA K W + LDV+ AFLNG L+E +Y +Q GF+ K P YL ++GF ++S+P +Y K S D T +++S++VDD+L+ G D L+ + + Q+ F +TDLG ++ LGMEV N+ + + +SQ+ + L +L++F M + P T + + ++ D LL AT+ + LA ++HF L+ I T E E IA AA Q +L + +L QL+ E++ +N+ A+ +A N + ++KH I+F +R+ ++ ++ + H +S DQLADILTK
Sbjct: 17 EKKVIGVRWVFRAKFNADGSLNKHKAKLVVKGYSQQYGVDFDETLAPVARLDTIKLLFALAAQKKWQIHQLDVKSAFLNGFLKEEIYIEQPDGFQVQGQEDKVYRLKKALYELKQAPRAWYDRVDAYLSNLGFEKSLSEPTLYVKKSKDETLLIVSIYVDDLLVAGSKDVLVNEFKAQMQEVFDMTDLGVMTYFLGMEV--NQTDHGIFISQHAFSLKILDKFSMQNCKPVSTLMAQGEKLSSIGDHVRVDEKEYRSLVGCLLYLTATRPDLMHAVSMLARFMHCCNVLHFRAAKKMLRYIKGTLRLEVEYIAAAAAVNQAIWLRKLLYDLNEEQLEPTEIKVDNQSAVAIAKNPVFHGKTKHFKIKFHFVREAEQTGEVSLVHCSSQDQLADILTK 411
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Match: A0A2N9H171_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H171_FAGSY) HSP 1 Score: 174 bits (440), Expect = 2.100e-44 Identity = 131/452 (28.98%), Postives = 203/452 (44.91%), Query Frame = 1
Query: 1 MPSDHKVIGTRWVFKVKADG-----KFKARLVVQGWSQIH--------------ESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFE------------------KTHPTTG----QPYLRSMGFTPTISDPCIYSKGSND-TYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTP-------------------------------------------------GVKT----------DPTTTGE-DSALLDTAATKESTTGTMFFLANGLVHFSPRLQKITATSTAEAELIALAACAKQGTYLLNICRELGFQLDNFEVRSNNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKV 1050
+P K IG +WV+K+K DG +++ARLVV+G++Q + R +LA+ D + LD++ AFL+GEL+E +Y Q GFE K P ++ S+G+ SDPC+Y K D +I+L L+VDD+L+ GP + D++ QL +F + DLG + ILGM++ R+R + LSQ Y+ +L RF M P TP GV T D T G DS +ST+G +F LA G V + +LQ I ATST EAE +A +K+ +L + EL + + + +++ ALHLA N + +++KHI +++ +R+ + + I + + D LAD+LTK F RS +
Sbjct: 772 LPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRAVLAMCATFDLYLEQLDMKTAFLHGELEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILLLYVDDMLVAGPNKDCITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINLKISSSMSPSNEAERMEMSQVPYASAVGSLMFAMVCTRPDIAQAVGVGTSNAALCYGGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELEHKQEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPINNDKFIWCRSSL 1223 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27765.7594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27765.7594.1 >prot_H-paniculata_contig27765.7594.1 ID=prot_H-paniculata_contig27765.7594.1|Name=mRNA_H-paniculata_contig27765.7594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=356bp MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHESQRLLLALATAKDWback to top mRNA from alignment at H-paniculata_contig27765:355..1767- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27765.7594.1 ID=mRNA_H-paniculata_contig27765.7594.1|Name=mRNA_H-paniculata_contig27765.7594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1413bp|location=Sequence derived from alignment at H-paniculata_contig27765:355..1767- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27765:355..1767- >mRNA_H-paniculata_contig27765.7594.1 ID=mRNA_H-paniculata_contig27765.7594.1|Name=mRNA_H-paniculata_contig27765.7594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2136bp|location=Sequence derived from alignment at H-paniculata_contig27765:355..1767- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |