mRNA_H-paniculata_contig11169.748.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.260e-32 Identity = 65/127 (51.18%), Postives = 80/127 (62.99%), Query Frame = 2 Query: 194 QVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEGVRT 574 QVL LQ LGRGNCFDD+ LS MS MA FH FC+ F EL++ I LP G VM MYD+LG A+ S DVTHI WG P + R TG E PT+AY++ VDH+GRA+ +T G ++T Sbjct: 3 QVLTTLQTLGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGVHTIKT 129
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 135 bits (339), Expect = 3.700e-32 Identity = 65/124 (52.42%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 194 QVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 QVL LQ+LGRGNCFDD+ LS MS MA FH FC+ F EL++ I LP G VM MYD+LG A+ S DVTHI WG P + R TG E PT+AY++ VDH+GRA+ +T G+ G Sbjct: 3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTG 126
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.110e-31 Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 194 QVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 QVL LQ+L RGN F D+ ++S +S + + FH FC+ F ELYD ++ LP GEDL++VM YD +GF A+ S DVTHI+WG P + +R+ TG E PT+A+++ VDHSGR L VT+G+ G Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTG 206
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.770e-30 Identity = 61/124 (49.19%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 194 QVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 +VL LQ+L RGN F D+ ++S +S + + FH FC+ F ELYD ++ LP GEDL++VM YD +GF A+ S DVTHI+WG P + +R+ TG E PT+A+++ VDHSGR L VT+G+ G Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTG 297
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 128 bits (321), Expect = 5.090e-30 Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 194 QVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEGVRTHWFNRLIATFRTKDMGFDSGHV--HNSWWILS 664 QVLGVLQ LGRGNCF DV N S MS A+ FH FC F L+ TWI+LPEGEDL+RV + Y LG+ A+ S D TH+ W S + G E T+ +E I DH+GR L TKGY G ++ + ++ +M ++G V H W+++ Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAEN---DKTVVIYKY-EMYDETGDVTKHTGGWLIA 159
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 133 bits (334), Expect = 5.160e-30 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 194 QVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 ++L LQ+LGRGNCFDD+ LS MS MA FH FC+ F EL++ I LP G VM MYD+LG A+ S DVTHI WG P + R TG E PT+AY++ VDH+GRA+ +T G+ G Sbjct: 250 KILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTG 373
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 126 bits (317), Expect = 8.000e-28 Identity = 65/141 (46.10%), Postives = 83/141 (58.87%), Query Frame = 2 Query: 149 SVFRSVYSCQHALVPQVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGED--LKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 +V +V H + +VL L +LGRGNCF + +S MS K Q FH FC F E+YD I LP E L VM YD LGF A+ S DVTHI W P + +R TG E PT+AY++ VDH+GRA+ VT+G+ G Sbjct: 70 AVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTG 210
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.250e-27 Identity = 62/120 (51.67%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 206 VLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 V QVLG+GNCFDDV LS MS MAQ FH FC F E++D I LP G L VM ++ +LG+ A S DVTHI W P + R TG E PT+AY++ VDH GR L VT G+ G Sbjct: 40 VPQVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTG 159
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 124 bits (310), Expect = 3.360e-27 Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 179 HALVPQVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGE--DLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGY 559 H + +VL L +LGRGNCF + +S MS K QT FH FC+ F E+YD I LP + +L VM YD LGF AM S DVTHI W P + +R TG E +PT+ Y++ V+H+GRA+ VT+G+ Sbjct: 93 HPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGF 221
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.100e-26 Identity = 63/131 (48.09%), Postives = 79/131 (60.31%), Query Frame = 2 Query: 179 HALVPQVLGVLQVLGRGNCFDDVTNLSGMSVKMAQTFFHAFCEKFVYELYDTWIKLPEGE--DLKRVMAMYDELGFISAMESGDVTHIHWGYAPVSHSRL*TGTEKIPTLAYEIIVDHSGRALCVTKGYEG 565 H + +VL L +LGRGN F + NLS MS Q FH FCE F E+YD I LP E +L RVM Y++LGF AM S DVTHI W P + R TG E PT+ Y++ V+H+GR L VT+G+ G Sbjct: 122 HPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTG 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11169.748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11169.748.1 >prot_H-paniculata_contig11169.748.1 ID=prot_H-paniculata_contig11169.748.1|Name=mRNA_H-paniculata_contig11169.748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp MSVKMAQTFFHAFCEKFVYELYDTWIKLPEGEDLKRVMAMYDELGFISAMback to top mRNA from alignment at H-paniculata_contig11169:2866..4587+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11169.748.1 ID=mRNA_H-paniculata_contig11169.748.1|Name=mRNA_H-paniculata_contig11169.748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1722bp|location=Sequence derived from alignment at H-paniculata_contig11169:2866..4587+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11169:2866..4587+ >mRNA_H-paniculata_contig11169.748.1 ID=mRNA_H-paniculata_contig11169.748.1|Name=mRNA_H-paniculata_contig11169.748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=426bp|location=Sequence derived from alignment at H-paniculata_contig11169:2866..4587+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |