mRNA_H-paniculata_contig27280.7464.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT) HSP 1 Score: 280 bits (716), Expect = 6.830e-88 Identity = 146/372 (39.25%), Postives = 230/372 (61.83%), Query Frame = 1
Query: 67 VRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVVADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNL 1179
V +L KS YGLKQS R WN+ LD+ L IG ++ +D C+Y ++G +VA++VD++++AG+ EK+ + K +I++RF++KD+G L +LG++V ++ +G + I Q TY ++K YG + C+ V TPV+ +++ +L N EY+ VGSL+ S+ TRPDI +AV+ A+ + E + KRIFRYL + G + +N + ADWA + DRKST+GY F +NG A+SW S+KQ V S+ EAEYVA A +E +++R+LL ++ MT++EDN+SAI +SK H R+KHI +++H +R+ + + L + Y TG LAD+ TKG+ + QF++LR L
Sbjct: 13 VCKLNKSRYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELF----NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 376
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM) HSP 1 Score: 274 bits (701), Expect = 4.920e-85 Identity = 148/376 (39.36%), Postives = 225/376 (59.84%), Query Frame = 1
Query: 67 VRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRREKVDEF-KHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLS-EPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVV-ADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSIS-FGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNLL 1182
V +L++SLYGLKQS R WN +DD ++ +G ++ +D C+Y RD G+ + VA+YVD+LV+A +++ E KH +S+RF M DLG L LG+E++ R +G +T+ Q +++ +L +G + + V TP + + + E + YR +VG+LM TRPD+A AV ++ DPC KR+ RYL P G F + + G+ G ADWA +E R+ST+GY F +NGG ISW S+KQ V SSTEAEY+A EA +E V+L+ L + ++ ++EDN+ +I L+K H RTKHI +R+H +RE + +G + L+Y+ T D LAD++TK ++ VQFQ LR+ L
Sbjct: 33 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQVLRSKL 405
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 280 bits (716), Expect = 1.040e-84 Identity = 147/394 (37.31%), Postives = 240/394 (60.91%), Query Frame = 1
Query: 1 VKEELFVKLPPEFSPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVVADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNL 1179
+++E+++K P F + +L KSLYGLKQS R WN+ LD+ L IG ++ +D C+Y ++G +VA++VD++++AG+ EK+ + K +I++RF++KD+G L +LG++V ++ + + I Q TY ++K YG + C+ V TPV+ +++ +L N E++ VGSL+ S+ TRPDI +AV+ A+ +P E + KRIFRYL + G + +N + ADWA + DRKST+GY F +NG A+SW S+KQ V S+ AEYVA A +E +++R+LL ++ MT++EDN+SAI +SK H R+KHI ++++ +R+ + + L + Y TG LAD+ TKG+ + QF++LR L
Sbjct: 267 LEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELF----NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 651
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 287 bits (735), Expect = 1.130e-83 Identity = 151/394 (38.32%), Postives = 242/394 (61.42%), Query Frame = 1
Query: 1 VKEELFVKLPPEFSPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVVADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNL 1179
+++E+++K P F + V +L KSLYGLKQS R WN+ LD+ L IG ++ +D C+Y ++G +VA++VD++++AG+ EK+ + K +I++RF++KD+G L +LG++V ++ + + I Q TY ++K YG + C+ V TPV+ +++ +L N EY+ VGSL+ S+ TRPDI +AV+ A+ +P E + KRIFRYL + G + +N + ADWA + DRKST+GY F +NG A+SW S+KQ V S+ EAEYVA A +E +++R+LL ++ MT++EDN+SAI +SK H R+KHI +++H +R+ + + L + Y TG LAD+ TKG+ + QF++LR L
Sbjct: 881 LEDEVYMKQPEGFEVKGKEH-LVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELF----NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 1265
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 276 bits (706), Expect = 7.140e-83 Identity = 157/397 (39.55%), Postives = 237/397 (59.70%), Query Frame = 1
Query: 1 VKEELFVKLPPEFSPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNIL-APESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVV-ADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNLL 1182
+KEE+++K F + V RLR+S+YGLKQS R WN+ LD L +G ++ D C+Y ++EGGE ++AVYVD++++AG+ + K++E K ++++F+MKD+G L LG++V + I I Q Y + VL+ +G + + TPV + A + + ++ + N Y+ VG L+ ST TRPDIAYAV AR DP +E KRI RYL+ D+G + G G ADWA ++DRKST+GYVF ++ AISW S+KQ V S+ EAEY+A A +E V+L++LL + G M + EDN++AI ++K + H R KHI +++H IRE + + L+Y T + +ADI TKG+S VQF +LR +L
Sbjct: 103 LKEEVYMKQTEGFIEKGKEH-LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVN-----YQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 491
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 264 bits (674), Expect = 2.780e-81 Identity = 148/389 (38.05%), Postives = 229/389 (58.87%), Query Frame = 1
Query: 1 VKEELFVKLPPEF----SPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVVADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSR 1152
V+EEL++ P F +P+ + + L ++LYG KQ+ R WN+ L+ L G G RS D C+Y R + + ++ VYVD+L+I R + ++ E K + + F +K+LG L LGIE+ R+R + TI ++Q YI+ + + +G ++C+ V TP + ++ P + D++ P YR +VG+LM +T TRPDIA AV + A+ E + KRI +YL DLG F G + G + A WA ++ R+STTGYVF LNG AISW S++Q V SSTEAEY+A A +E V+LR+LL + C + T+F+DN+ I L+K H RTKHI +++H +RE + + ++ L+Y T + +AD TK ++R
Sbjct: 17 VEEELYMDQPDGFEDQVNPTKKCL-----LMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFS--IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-AEDEVFVPR---YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 394
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4) HSP 1 Score: 272 bits (696), Expect = 3.370e-81 Identity = 156/390 (40.00%), Postives = 222/390 (56.92%), Query Frame = 1
Query: 1 VKEELFVKLPPEFSPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVI-AGRREKVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVVADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQR 1167
+KEE+++ LPP F R + +L+K LYGLKQ+ R W L +G R ++ ++ D G ++VAVYVD+L+I + E V + K ++ +F M DLG +LG+E+ RDRP+ T++ISQ Y E+L+ +G +C+ PTP+E V++ KLSE +S Y+ VGSLM GT PD+A++V ++ P +E KR+ RY+ DLG F G N + ADWA +R S TGYV L G ISW S+KQ SSTEAEY+AA A KE ++LR + + F L+ DN+SAI L K S H RTKHI VR+H IRE + + + L Y+ T DQ+AD LTKG+S+V+ +
Sbjct: 326 LKEEIYMNLPPGF----RKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNG--IRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLR------KLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTKIEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSKVKLDK 703
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 270 bits (691), Expect = 3.630e-81 Identity = 154/397 (38.79%), Postives = 235/397 (59.19%), Query Frame = 1
Query: 1 VKEELFVKLPPEFSPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNIL-APESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVV-ADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNLL 1182
+KEE+++K P F + V RLR+S+ GLKQS R WN+ LD L +G ++ D C+Y ++EGGE ++AVYVD++++AG+ + K++E K ++++F+MKD+G LG++V + + I I Q Y + VL+ +G + + TPV + A + + ++ + N Y+ VG L+ ST TRPDIAYAV AR P +E KRI RYL+ D+G + G G ADWA ++DRKST+GYVF ++ AISW S+KQ V S+ EAEY+ A +E V+L++LL + G M + EDN++AI ++K + H R KHI +++H IRE + + L+Y T + +ADI TKG+S VQF +LR +L
Sbjct: 251 LKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVN-----YQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 639
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: H3H8W9_PHYRM (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8W9_PHYRM) HSP 1 Score: 273 bits (699), Expect = 7.750e-81 Identity = 147/376 (39.10%), Postives = 224/376 (59.57%), Query Frame = 1
Query: 67 VRRLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLVIAGRREKV-DEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLS-EPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVV-ADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSIS-FGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLRNLL 1182
V +L++SLYGLKQS R WN +DD ++ +G ++ +D C+Y RD G+ + VA+YVD+LV+A +++ + KH +S+RF M DLG L LG+E++ D +G +T+ Q +++ +L +G + + V TP + + + E + YR VG+LM TRPD+A AV ++ DPC KR+ RYL P G F + + G+ G ADWA +E R+ST+GY F +NGG ISW S+KQ V SSTEAEY+A EA +E V+L+ L + ++ ++EDN+ +I L+K H RTKHI +R+H +RE + +G + L+Y+ T D LAD++TK ++ VQFQ LR+ L
Sbjct: 434 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQVLRSKL 806
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE) HSP 1 Score: 257 bits (656), Expect = 4.380e-79 Identity = 148/368 (40.22%), Postives = 217/368 (58.97%), Query Frame = 1
Query: 73 RLRKSLYGLKQSDRNWNNPLDDILVGIGLERSITDSCLYFSRDEGGETNLLVAVYVDNLV-IAGRREKVDEFKHNISQRFRMKDLGSLSRMLGIEVRRDRPNGTITISQGTYIREVLKGYGSDECRGVPTPVEGKVNILAPESADKLSEPNGNSTEYRGMVGSLMCASTGTRPDIAYAVHQAARRMEDPCQEDSSTCKRIFRYLSIVPDLGTTFGGKSNGHGLEGVVADWADYVEDRKSTTGYVFNLNGGAISWCSRKQYLVTWSSTEAEYVAAGEAGKETVYLRELLGSISFGCRGSMTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYMQTGDQLADILTKGVSRVQFQRLR 1173
+++KS+YGLKQS R WN ++ +G ++S +D C++ + E ++AVYVD+L+ I E +DE K + +R++MKDLG LS +LGI V +D+ I + Q YI +LK YG D+ V TP + V + + D +S P ST Y+ MVGSL+ A+ TRPDIA AV ++ +P + KRI RYL +L F N + ADWA ++DR STTG +F L+GGA+SW S+KQ V S+ EAEYVA +A +E +LR LL + + ++ L EDN+ AI ++K H RTKHI +R+H IRE +++G + L+Y T ADILTK ++R +F+ R
Sbjct: 2 QIKKSIYGLKQSPRCWNKEFTTFMMDLGFKQSSSDPCVFVRLSQELE---IIAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKL---KKDDGVSNPVDPST-YQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGNKDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTKPTVIL-EDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFR 361 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27280.7464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27280.7464.1 >prot_H-paniculata_contig27280.7464.1 ID=prot_H-paniculata_contig27280.7464.1|Name=mRNA_H-paniculata_contig27280.7464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=396bp VKEELFVKLPPEFSPSSRGIPFVRRLRKSLYGLKQSDRNWNNPLDDILVGback to top mRNA from alignment at H-paniculata_contig27280:279..1529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27280.7464.1 ID=mRNA_H-paniculata_contig27280.7464.1|Name=mRNA_H-paniculata_contig27280.7464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1251bp|location=Sequence derived from alignment at H-paniculata_contig27280:279..1529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27280:279..1529+ >mRNA_H-paniculata_contig27280.7464.1 ID=mRNA_H-paniculata_contig27280.7464.1|Name=mRNA_H-paniculata_contig27280.7464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2376bp|location=Sequence derived from alignment at H-paniculata_contig27280:279..1529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |