mRNA_H-paniculata_contig2726.7459.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: D8LCC5_ECTSI (Deubiquitinating enzyme A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC5_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 2.570e-20 Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 7 SHSYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYME 171
S YEHY AL +GL VVPVEGDGNCLFRSVSHQ+YGDD+++ LVRARCMDYME
Sbjct: 324 SSRYEHYRRALGSRGLRVVPVEGDGNCLFRSVSHQVYGDDNHHRLVRARCMDYME 378
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A7S2GE79_9STRA (Deubiquitinating enzyme A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE79_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.400e-19 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 1
Query: 10 HSYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYME 171
H YE Y AL+RQGL V PVEGDGNCLFRSVSHQ+YGDD+++ +VR CMDYME
Sbjct: 117 HQYERYLQALDRQGLHVQPVEGDGNCLFRSVSHQVYGDDAHHMIVRRLCMDYME 170
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A485KME7_9STRA (Deubiquitinating enzyme A n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KME7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.250e-18 Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 1
Query: 13 SYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYMEV 174
SY+HY AAL+R L +V VEGDGNCLFRSVSHQ+YGDD ++ LVR CMDYME+
Sbjct: 167 SYDHYAAALQRLDLGIVAVEGDGNCLFRSVSHQLYGDDRHHLLVRKFCMDYMEL 220
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A5D6YD11_9STRA (Deubiquitinating enzyme A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD11_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 9.580e-18 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 16 YEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYME 171
++HY ALER GL + P++GDGNCLFRSVSHQ+YGDD ++ VRA CMDYME
Sbjct: 465 FQHYREALERHGLRICPIDGDGNCLFRSVSHQVYGDDRHHAAVRAMCMDYME 516
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: T0QKX0_SAPDV (Deubiquitinating enzyme A n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKX0_SAPDV) HSP 1 Score: 84.3 bits (207), Expect = 1.670e-17 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 TWSHSYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYMEV 174
T S++ YCAAL + L +VPV GDGNCLFR++SHQIYGDD ++ +VRA C+DYME
Sbjct: 166 TTGSSFDTYCAALAQHELALVPVPGDGNCLFRAISHQIYGDDQFHAVVRASCLDYMEA 223
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: K3WER0_GLOUD (Deubiquitinating enzyme A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WER0_GLOUD) HSP 1 Score: 84.3 bits (207), Expect = 1.770e-17 Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 16 YEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYME 171
+E Y ALE QGL + P+EGDGNCLFRSVSHQ+YGDD ++ +VRA CMDYME
Sbjct: 243 FEQYRNALEAQGLQIYPIEGDGNCLFRSVSHQVYGDDRHHAVVRAMCMDYME 294
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A835YK15_9STRA (Deubiquitinating enzyme A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK15_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.160e-16 Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 7 SHSYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYMEV 174
S Y Y AL + GL V P+ GDGNCLFRSVSHQIYGDD ++ L+R RCMDYME
Sbjct: 248 SERYTRYLFALRKHGLRVQPIPGDGNCLFRSVSHQIYGDDRFHGLIRERCMDYMEA 303
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A6G0W5F2_9STRA (Deubiquitinating enzyme A n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5F2_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.980e-16 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 13 SYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYMEV 174
SY+ Y AL+ +VPVEGDGNCLFRSVSHQ+YGDD ++ LVR CMDYME+
Sbjct: 163 SYDQYSRALQHLDYTIVPVEGDGNCLFRSVSHQLYGDDRHHALVRKFCMDYMEL 216
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A2D4BI13_PYTIN (Deubiquitinating enzyme A n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI13_PYTIN) HSP 1 Score: 80.9 bits (198), Expect = 2.870e-16 Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 16 YEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYME 171
++HY AL QGL + VEGDGNCLFRSVSHQIYGDD ++ LVR CMDYME
Sbjct: 154 FQHYRQALAAQGLSIFAVEGDGNCLFRSVSHQIYGDDRHHGLVRRLCMDYME 205
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Match: A0A067BIR8_SAPPC (Deubiquitinating enzyme A n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BIR8_SAPPC) HSP 1 Score: 79.7 bits (195), Expect = 7.220e-16 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 TWSHSYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRARCMDYMEV 174
T +++ YCAAL + L +V V GDGNCLFR++SHQ+YGDD ++ +VRA CMDYME
Sbjct: 168 TTGSAFDMYCAALSQHELDLVQVPGDGNCLFRAISHQVYGDDQHHAVVRASCMDYMEA 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2726.7459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2726.7459.1 >prot_H-paniculata_contig2726.7459.1 ID=prot_H-paniculata_contig2726.7459.1|Name=mRNA_H-paniculata_contig2726.7459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp TWSHSYEHYCAALERQGLCVVPVEGDGNCLFRSVSHQIYGDDSYYTLVRAback to top mRNA from alignment at H-paniculata_contig2726:108..308- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2726.7459.1 ID=mRNA_H-paniculata_contig2726.7459.1|Name=mRNA_H-paniculata_contig2726.7459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=201bp|location=Sequence derived from alignment at H-paniculata_contig2726:108..308- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2726:108..308- >mRNA_H-paniculata_contig2726.7459.1 ID=mRNA_H-paniculata_contig2726.7459.1|Name=mRNA_H-paniculata_contig2726.7459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at H-paniculata_contig2726:108..308- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |