prot_H-paniculata_contig2725.7452.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2725.7452.1
Unique Nameprot_H-paniculata_contig2725.7452.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length225
Homology
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A6H5KPV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV7_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 6.390e-114
Identity = 179/239 (74.90%), Postives = 208/239 (87.03%), Query Frame = 0
Query:    1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEG-----AVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRA-AMGDE-------RGEGRR-PGMFDTLKAMTDDLGTNASPQV 225
            VGDTAGAI+HYE+AGTHC EVPRML+ER RVEDLEEYITQGNN +LLKWWSQY+ESRGEFEKAR+ YTRAQD+LS+VRLACQ G VE      A++IVN+SGSAPAAYHLARHLEA+GRTAEAV+FY RS+RFNHAIRLAKDHGMDSELMGFAL+SRP+LMVSVA++L+ KGE+EKAVQLYQKAG+V +ALD+CFR+ A G E        GEG + P MF+ LK+M DDLG++ASPQV
Sbjct:  101 VGDTAGAIQHYELAGTHCVEVPRMLYERGRVEDLEEYITQGNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQVERVRHRQAIEIVNESGSAPAAYHLARHLEAVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKSRPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKALDLCFRSGAAGGEADQKHGGEGEGEKSPAMFEALKSMMDDLGSHASPQV 339          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 4.780e-108
Identity = 180/239 (75.31%), Postives = 207/239 (86.61%), Query Frame = 0
Query:    1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEG-----AVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFR--AAMGDE------RGEGRR-PGMFDTLKAMTDDLGTNASPQV 225
            VGDTAGAI+HYE+AGTHC EVPRML+ER RVEDLEEYITQGNN +LLKWWSQY+ESRGEFEKAR+ YTRAQD+LS+VRLACQ G VE      A+ IVN+SGSAPAAYHLARHLEA+GRTAEAV+FY RS+RFNHAIRLAKDHGMDSELMGFAL+SRP+LMVSVA++L+ KGE+EKAVQLYQKAG+V +ALD+CFR  AA G+        GEG R P MF+ LK+M DDLG++ASPQV
Sbjct: 1050 VGDTAGAIQHYELAGTHCVEVPRMLYERGRVEDLEEYITQGNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQVERVRHRQAIGIVNESGSAPAAYHLARHLEAVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKSRPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKALDLCFRSGAASGEADQKHGGEGEGERSPAMFEALKSMMDDLGSHASPQV 1288          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S1UFU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFU4_9STRA)

HSP 1 Score: 257 bits (657), Expect = 1.890e-80
Identity = 130/225 (57.78%), Postives = 166/225 (73.78%), Query Frame = 0
Query:    1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQV 225
            +G+   A  HYE A TH  EVPRMLFE+ R+EDLE+YI +  ++EL +WW+ Y ES  +F+KAR +Y RA D LS VRLAC + D+E A DI+ND+ SA AAYH+ARHLE +    EA+ +YT+S  +NHAIRLAK HG+D+ELM FAL+SRP+LMV  A + E+KGE+EKAVQLYQK GD+ +ALD+CFRA       EGRR  MFD L+ +TD+LG   SPQV
Sbjct:  198 IGEYKAAARHYESAETHRKEVPRMLFEQHRLEDLEKYIVRAGDSELQRWWAAYCESVSDFDKARAYYKRAGDNLSRVRLACYNRDLERAADIINDTKSASAAYHMARHLEGINEIREAIVYYTKSGCYNHAIRLAKAHGLDAELMSFALKSRPSLMVDCAAYFEKKGEIEKAVQLYQKGGDIPKALDLCFRAGA-----EGRR-SMFDVLRNITDELGATTSPQV 416          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S3Y5S0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S0_HETAK)

HSP 1 Score: 249 bits (636), Expect = 1.880e-75
Identity = 132/224 (58.93%), Postives = 160/224 (71.43%), Query Frame = 0
Query:    2 GDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQV 225
            GD AGAI+HYE AGTH  EVPRMLFER RV+DLE YITQG + +LLKWW+ Y+ES+G  +KAR+ Y  A+D L++VRLAC + D E A  +V  SGS  AAYHLAR  EA G   EAV  Y  S R+NHAIRLAK +GMD EL+GFAL+S PA  V VA + E KGE EKAV+LYQK GD  +ALD+CF+A       EGR+ G+FD L+ + + LG   SPQV
Sbjct:   98 GDGAGAIQHYEAAGTHQTEVPRMLFERRRVDDLEHYITQGKDPKLLKWWAGYLESKGALDKARRFYAGAEDHLALVRLACYNQDFEEARRLVEKSGSRAAAYHLARQHEARGEVQEAVGQYAASGRYNHAIRLAKAYGMDLELVGFALKSDPAQTVDVARYFELKGEYEKAVELYQKGGDAPKALDLCFKAGA-----EGRK-GVFDALRQIAEGLGEETSPQV 315          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA)

HSP 1 Score: 241 bits (616), Expect = 7.160e-70
Identity = 127/228 (55.70%), Postives = 160/228 (70.18%), Query Frame = 0
Query:    1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGT---NASPQV 225
            +GDT GAI+HYE A TH  EVPRML ER R+ +LE YI    + EL+KWW++Y ES G+   AR  Y RA D LS+VRLAC +GD+  A  IV D+GS  AAYHLAR  E  G   EAVA Y RS  +NHA+RLAK HGMD+ELM FA+QSRP+LMV  A++ E KGE++KAVQLY K GDVA AL++CF+A      G   + GMF+ L+A+T++LG    + +PQV
Sbjct:  928 LGDTEGAIKHYEDADTHRTEVPRMLLERGRLGELEAYIASRGDPELVKWWAKYCESIGDHAAARLFYARAADHLSLVRLACYAGDMNKAAAIVRDTGSVAAAYHLARQHEGRGEWQEAVALYARSRCYNHAMRLAKSHGMDAELMSFAMQSRPSLMVDAAQYFEDKGELDKAVQLYHKGGDVAHALEICFKA------GADGQTGMFELLRAITEELGQASGSTNPQV 1149          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S2RUZ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUZ9_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.190e-64
Identity = 113/224 (50.45%), Postives = 155/224 (69.20%), Query Frame = 0
Query:    1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQ 224
            VGD + A++H+E A TH  +VPRML +R R+ DLEEYI + ++ ELLKWW+ Y E+ G+F+KAR  Y RAQD  S++R+AC +G+   A  I+ +SG A AAY LAR+LE      EA+ +Y  S  +NHAIRLA++ G+D ELM FAL++   LM+  A+H E KG++EKAVQLYQK GD+ +ALD+CFRA      G+GR   MFD L+ +  +L  N +PQ
Sbjct:  750 VGDISSAVKHFEHADTHRTQVPRMLSDRKRLTDLEEYIARSSDPELLKWWAGYCEAHGQFDKARHFYYRAQDHFSLIRIACVNGETARAKQIIEESGDASAAYFLARYLEGHNEIQEAINYYAVSKCYNHAIRLARNFGLDGELMSFALKASEPLMIDCAQHFESKGDLEKAVQLYQKGGDIPKALDLCFRAG-----GQGRS-SMFDVLQTIAGELDENTNPQ 967          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S2CPX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPX6_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.610e-64
Identity = 113/231 (48.92%), Postives = 159/231 (68.83%), Query Frame = 0
Query:    1 VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVE-------DLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQ 224
            +GD  GA++H+E+A TH  EVPRMLF+  +V         LEEYI   ++ EL+KWW+ Y ES G+++KAR  Y RAQ++ S+VR+AC + ++  A +IV ++ +A AAY+LAR+LE +    EA+ +Y +S  +NHAIRLAK+ G+DSELM +A++SRP+LMV  A + E KGE EKAVQLYQK GD+ +ALD+CF+A      G   R  MF+ LK + +DL    SPQ
Sbjct:  352 IGDINGAVKHFELADTHRTEVPRMLFDLSQVSRDPKVLSKLEEYIAHSSDPELIKWWAGYCESIGQYDKARHFYHRAQNYFSLVRIACFNREIPRAKNIVEETNNAAAAYYLARYLEGMTEVQEAINYYAQSGCYNHAIRLAKNFGLDSELMSYAIKSRPSLMVECAVYFESKGEFEKAVQLYQKGGDIPKALDLCFKA------GSQGRTSMFEVLKNIANDLDDQTSPQ 576          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A4Q5XS05_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5XS05_9DELT)

HSP 1 Score: 204 bits (518), Expect = 6.330e-61
Identity = 103/235 (43.83%), Postives = 146/235 (62.13%), Query Frame = 0
Query:    2 GDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGM-----------FDTLKAMTDDLGTNASPQV 225
            G  + A E Y++A     EVPRMLF  DRV++L +YI    N  LLKWW+ Y+ES    +KA+++Y +A+D+LS+VR+AC   D   A +++  SG   +AYH AR LE  G   EA++FY  +  F+H IRL K HG+D ELM +AL+S P  MV  AE+ E KGE +KA++L+ K  D+A AL++CFR  +G+E      PG            F+T+ A+  DLG N+SPQ+
Sbjct:   81 GQVSEATECYKLAAVDHVEVPRMLFYLDRVDELNDYIVHSENALLLKWWASYLESIDRLDKAKKYYAKAKDYLSLVRIACFQSDFTTAAEVITQSGDKASAYHFARQLEHAGEFQEAISFYALAGCFHHCIRLCKAHGIDGELMRYALKSTPVYMVQCAEYYEAKGEFDKAIELFYKGQDIAYALELCFR--IGEEMSTANAPGKKIAQHPYAAAAFETINAIAQDLGVNSSPQL 313          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A061REQ7_9CHLO (Intraflagellar transport protein 140-like (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061REQ7_9CHLO)

HSP 1 Score: 211 bits (538), Expect = 3.900e-60
Identity = 105/219 (47.95%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    7 AIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQV 225
            AI  YE++ TH  EVPRMLFE +++E+L +YI + N  +L KWW++Y ES G+F++AR HY  A D+LSVVRL C   D+E A  IVN++    AA+HL R +EA G   EAV FY+RS RF+HA+RLA+ HGM+ ELM  ALQS P +M+  A +L ++GE  KAVQLYQ+ G   RALD+CF+              +F+ L+ + D+L T++ P +
Sbjct:  305 AIREYELSNTHFFEVPRMLFETNQIEELRKYIEKSNEPKLTKWWARYNESLGQFDEARNHYEAAGDYLSVVRLLCFQNDLESARAIVNETNDPAAAFHLGRQMEAQGIVKEAVMFYSRSKRFSHAVRLARKHGMNRELMNLALQSTPRVMIDTANYLSQQGEYGKAVQLYQRGGCQGRALDICFKG------------NLFEELELIADELNTDSDPSL 511          
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Match: A0A7S3GS04_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GS04_9STRA)

HSP 1 Score: 210 bits (535), Expect = 5.500e-59
Identity = 101/218 (46.33%), Postives = 152/218 (69.72%), Query Frame = 0
Query:    7 AIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWWSQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAPAAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQSRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGEGRRPGMFDTLKAMTDDLGTNASPQ 224
            AIEHY ++G    EVPRMLF+ DRV++L +++ Q ++  LLKWW+ Y+ES   ++KA+++Y++A+D+LS+VR+AC  GD   A +IV ++    +AYH AR LE  G+  +A+ FY  S  +NH+IRLA+ + +D+ELM +AL+S PALM+  A H E++ E +KAVQLY K GD+ RALD+CFRA  G++        ++D L  +  DLG ++SPQ
Sbjct: 1017 AIEHYGLSGNSHTEVPRMLFQLDRVDELGDFVLQSDDPVLLKWWAAYLESIERYDKAKKYYSKARDYLSLVRIACFKGDFNKAAEIVAETNDRASAYHFARQLENQGQYNDAITFYASSGCYNHSIRLARAYNLDTELMRYALKSTPALMIECAVHFEQRREFDKAVQLYHKGGDIPRALDLCFRA--GEDPSYANNTLVYDMLNTIAQDLGADSSPQ 1232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2725.7452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPV7_9PHAE6.390e-11474.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH96_ECTSI4.780e-10875.31Intraflagellar transport protein 140 puative n=1 T... [more]
A0A7S1UFU4_9STRA1.890e-8057.78Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3Y5S0_HETAK1.880e-7558.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YKN9_9STRA7.160e-7055.70Putative intraflagellar transport protein 140 n=1 ... [more]
A0A7S2RUZ9_9STRA1.190e-6450.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CPX6_9STRA3.610e-6448.92Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4Q5XS05_9DELT6.330e-6143.83Uncharacterized protein (Fragment) n=1 Tax=Myxococ... [more]
A0A061REQ7_9CHLO3.900e-6047.95Intraflagellar transport protein 140-like (Fragmen... [more]
A0A7S3GS04_9STRA5.500e-5946.33Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..197
e-value: 3.6E-12
score: 47.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..178
NoneNo IPR availablePANTHERPTHR15722:SF7INTRAFLAGELLAR TRANSPORT PROTEIN 140 HOMOLOGcoord: 2..224
NoneNo IPR availablePANTHERPTHR15722IFT140/172-RELATEDcoord: 2..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2725contigH-paniculata_contig2725:2131..3406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2725.7452.1mRNA_H-paniculata_contig2725.7452.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2725 2131..3406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2725.7452.1 ID=prot_H-paniculata_contig2725.7452.1|Name=mRNA_H-paniculata_contig2725.7452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp
VGDTAGAIEHYEIAGTHCAEVPRMLFERDRVEDLEEYITQGNNTELLKWW
SQYMESRGEFEKARQHYTRAQDFLSVVRLACQSGDVEGAVDIVNDSGSAP
AAYHLARHLEALGRTAEAVAFYTRSSRFNHAIRLAKDHGMDSELMGFALQ
SRPALMVSVAEHLERKGEMEKAVQLYQKAGDVARALDVCFRAAMGDERGE
GRRPGMFDTLKAMTDDLGTNASPQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf